RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W SNX41Q04053 625 aa7.16□□□□□ -1.26
ABP1YCR088W HDA2Q06629 674 aa7.16□□□□□ -1.26
ABP1YCR088W HIS5P07172 385 aa7.15□□□□□ -1.26
ABP1YCR088W TY1A-LR4P0C2I8 440 aaKnown RBP7.15□□□□□ -1.26
ABP1YCR088W TY1A-DR6P0CX70 440 aa7.15□□□□□ -1.26
ABP1YCR088W TY1A-ER1P0CX71 440 aa7.15□□□□□ -1.26
ABP1YCR088W TY1A-LR2P0CX72 440 aa7.15□□□□□ -1.26
ABP1YCR088W TY1A-PLP0CX73 440 aa7.15□□□□□ -1.26
ABP1YCR088W TY1A-JR1P0CX74 440 aa7.15□□□□□ -1.26
ABP1YCR088W TY1A-LR3P0CX75 440 aa7.15□□□□□ -1.26
ABP1YCR088W TY1A-ML2P0CX76 440 aa7.15□□□□□ -1.26
ABP1YCR088W RPB8P20436 146 aa7.15□□□□□ -1.26
ABP1YCR088W MXR2P25566 168 aa7.15□□□□□ -1.26
ABP1YCR088W SRB6P32570 121 aa7.15□□□□□ -1.26
ABP1YCR088W PAD1P33751 242 aaKnown RBP RIP-Chip data7.15□□□□□ -1.26not detected
ABP1YCR088W PAN3P36102 679 aaPredicted RBP7.15□□□□□ -1.26
ABP1YCR088W VPS51P36116 164 aa7.15□□□□□ -1.26
ABP1YCR088W VBA2P38358 474 aaKnown RBP7.15□□□□□ -1.26
ABP1YCR088W GCV3P39726 170 aaPredicted RBP7.15□□□□□ -1.26
ABP1YCR088W MCM22P47167 239 aa7.15□□□□□ -1.26
ABP1YCR088W PEX25Q02969 394 aa7.15□□□□□ -1.26
ABP1YCR088W DXO1Q06349 442 aa7.15□□□□□ -1.26
ABP1YCR088W YOL073CQ08232 322 aa7.15□□□□□ -1.26
ABP1YCR088W ISU2Q12056 156 aa7.15□□□□□ -1.26
ABP1YCR088W TY1A-GR1Q12085 440 aa7.15□□□□□ -1.26
ABP1YCR088W TFC7Q12415 435 aa7.15□□□□□ -1.26
ABP1YCR088W TY1A-PR3Q6Q5H1 440 aaKnown RBP7.15□□□□□ -1.26
ABP1YCR088W TY1A-OLQ92392 440 aaKnown RBP7.15□□□□□ -1.26
ABP1YCR088W NAB2P32505 525 aaKnown RBP RIP-Chip data7.15□□□□□ -1.27not detected
ABP1YCR088W PRP39P39682 629 aaKnown RBP7.15□□□□□ -1.27
ABP1YCR088W SMB1P40018 196 aaKnown RBP7.15□□□□□ -1.27
ABP1YCR088W TIF34P40217 347 aaKnown RBP7.15□□□□□ -1.27
ABP1YCR088W CIN2P46670 268 aa7.15□□□□□ -1.27
ABP1YCR088W GPI14P47088 403 aaKnown RBP7.15□□□□□ -1.27
ABP1YCR088W WHI5Q12416 295 aa7.15□□□□□ -1.27
ABP1YCR088W VMA9Q3E7B6 73 aa7.15□□□□□ -1.27
ABP1YCR088W Q0142Q9ZZW4 58 aa7.15□□□□□ -1.27
ABP1YCR088W OPI3P05375 206 aa7.14□□□□□ -1.27
ABP1YCR088W PTP1P25044 335 aa7.14□□□□□ -1.27
ABP1YCR088W CWH43P25618 953 aa7.14□□□□□ -1.27
ABP1YCR088W DCG1P32460 244 aa7.14□□□□□ -1.27
ABP1YCR088W COS8P38723 381 aa7.14□□□□□ -1.27
ABP1YCR088W PUG1P40100 303 aa7.14□□□□□ -1.27
ABP1YCR088W RRD1P40454 393 aaKnown RBP7.14□□□□□ -1.27
ABP1YCR088W SYS1P41544 203 aa7.14□□□□□ -1.27
ABP1YCR088W YFR054CP43622 192 aa7.14□□□□□ -1.27
ABP1YCR088W CCC1P47818 322 aa7.14□□□□□ -1.27
ABP1YCR088W NIT3P49954 291 aa7.14□□□□□ -1.27
ABP1YCR088W YGL117WP53133 265 aa7.14□□□□□ -1.27
ABP1YCR088W YGR026WP53217 278 aa7.14□□□□□ -1.27
ABP1YCR088W PDR16P53860 351 aaKnown RBP7.14□□□□□ -1.27
ABP1YCR088W CTF19Q02732 369 aa7.14□□□□□ -1.27
ABP1YCR088W NCE101Q02820 53 aa7.14□□□□□ -1.27
ABP1YCR088W YPR172WQ06608 200 aa7.14□□□□□ -1.27
ABP1YCR088W PCC1Q3E833 88 aa7.14□□□□□ -1.27
ABP1YCR088W IPP1P00817 287 aaKnown RBP7.13□□□□□ -1.27
ABP1YCR088W CHO1P08456 276 aa7.13□□□□□ -1.27
ABP1YCR088W STE18P18852 110 aa7.13□□□□□ -1.27
ABP1YCR088W PET18P25362 215 aa7.13□□□□□ -1.27
ABP1YCR088W MRPL27P36526 146 aaPredicted RBP7.13□□□□□ -1.27
ABP1YCR088W PHB2P50085 310 aa7.13□□□□□ -1.27
ABP1YCR088W BRR6P53062 197 aa7.13□□□□□ -1.27
ABP1YCR088W MPA43P53583 542 aaPredicted RBP7.13□□□□□ -1.27
ABP1YCR088W YPR174CQ06616 221 aaPredicted RBP7.13□□□□□ -1.27
ABP1YCR088W AVO1Q08236 1176 aa7.13□□□□□ -1.27
ABP1YCR088W IRC13Q08630 104 aa7.13□□□□□ -1.27
ABP1YCR088W YRM1Q12340 786 aa7.13□□□□□ -1.27
ABP1YCR088W CYR1P08678 2026 aaKnown RBP7.13□□□□□ -1.27
ABP1YCR088W CET1O13297 549 aaPredicted RBP7.13□□□□□ -1.27
ABP1YCR088W TPI1P00942 248 aaKnown RBP7.13□□□□□ -1.27
ABP1YCR088W DAT1P13483 248 aaKnown RBP7.13□□□□□ -1.27
ABP1YCR088W HNM1P19807 563 aa7.13□□□□□ -1.27
ABP1YCR088W BET2P20133 325 aa7.13□□□□□ -1.27
ABP1YCR088W PMT2P31382 759 aa7.13□□□□□ -1.27
ABP1YCR088W ISC10P32645 267 aa7.13□□□□□ -1.27
ABP1YCR088W PFS1P38872 237 aa7.13□□□□□ -1.27
ABP1YCR088W ASP1P38986 381 aaPredicted RBP7.13□□□□□ -1.27
ABP1YCR088W YIL024CP40543 189 aa7.13□□□□□ -1.27
ABP1YCR088W BXI1P48558 297 aa7.13□□□□□ -1.27
ABP1YCR088W MPP6P53725 186 aaPredicted RBP7.13□□□□□ -1.27
ABP1YCR088W NRG1Q03125 231 aa7.13□□□□□ -1.27
ABP1YCR088W MRX8Q05473 314 aa7.13□□□□□ -1.27
ABP1YCR088W SNU23Q12368 194 aaPredicted RBP7.13□□□□□ -1.27
ABP1YCR088W RRI1Q12468 440 aa7.13□□□□□ -1.27
ABP1YCR088W PRM4Q12498 284 aa7.13□□□□□ -1.27
ABP1YCR088W ISN1Q99312 450 aa7.13□□□□□ -1.27
ABP1YCR088W CYT1P07143 309 aa7.12□□□□□ -1.27
ABP1YCR088W FUS1P11710 512 aa7.12□□□□□ -1.27
ABP1YCR088W PPA2P28239 310 aa7.12□□□□□ -1.27
ABP1YCR088W SPT10P35208 640 aa7.12□□□□□ -1.27
ABP1YCR088W BFR1P38934 470 aaKnown RBP RIP-Chip data7.12□□□□□ -1.27not detected
ABP1YCR088W AVT7P40501 490 aa7.12□□□□□ -1.27
ABP1YCR088W BUD8P41698 603 aa7.12□□□□□ -1.27
ABP1YCR088W CIS3P47001 227 aa7.12□□□□□ -1.27
ABP1YCR088W UBP8P50102 471 aa7.12□□□□□ -1.27
ABP1YCR088W MNN10P50108 393 aaKnown RBP7.12□□□□□ -1.27
ABP1YCR088W NRK1P53915 240 aa7.12□□□□□ -1.27
ABP1YCR088W NIS1P53939 407 aa7.12□□□□□ -1.27
ABP1YCR088W EST3Q03096 181 aa7.12□□□□□ -1.27
ABP1YCR088W SPR28Q04921 423 aa7.12□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 83.2 ms