RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeastyeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB1YCL054W AVT5P38176 459 aa2.3□□□□□ -2.04
SPB1YCL054W YBP1P38315 674 aa2.3□□□□□ -2.04
SPB1YCL054W WWM1P43582 211 aaKnown RBP2.3□□□□□ -2.04
SPB1YCL054W CWC23P52868 283 aaPredicted RBP2.3□□□□□ -2.04
SPB1YCL054W MRM2P53123 320 aa2.3□□□□□ -2.04
SPB1YCL054W SCW4P53334 386 aaKnown RBP2.3□□□□□ -2.04
SPB1YCL054W ARO80Q04052 950 aa2.3□□□□□ -2.04
SPB1YCL054W EMP46Q12396 444 aa2.3□□□□□ -2.04
SPB1YCL054W RAD7P06779 565 aa2.29□□□□□ -2.04
SPB1YCL054W AGA1P32323 725 aa2.29□□□□□ -2.04
SPB1YCL054W SPO23P33757 523 aa2.29□□□□□ -2.04
SPB1YCL054W ERG28P40030 148 aa2.29□□□□□ -2.04
SPB1YCL054W COA1P40452 197 aa2.29□□□□□ -2.04
SPB1YCL054W LCB3P47013 409 aa2.29□□□□□ -2.04
SPB1YCL054W COX16P47081 118 aa2.29□□□□□ -2.04
SPB1YCL054W NOP19P53317 196 aaPredicted RBP2.29□□□□□ -2.04
SPB1YCL054W WSC2P53832 503 aa2.29□□□□□ -2.04
SPB1YCL054W IBD2P53892 351 aa2.29□□□□□ -2.04
SPB1YCL054W SED5Q01590 340 aa2.29□□□□□ -2.04
SPB1YCL054W SPG3Q04398 127 aaPredicted RBP2.29□□□□□ -2.04
SPB1YCL054W GMC2Q06201 188 aa2.29□□□□□ -2.04
SPB1YCL054W SAM4Q08985 325 aaKnown RBP2.29□□□□□ -2.04
SPB1YCL054W FRE8Q12209 686 aa2.29□□□□□ -2.04
SPB1YCL054W SEY1Q99287 776 aa2.29□□□□□ -2.04
SPB1YCL054W REP1P03871 373 aa2.29□□□□□ -2.04
SPB1YCL054W RPS8AP0CX39 200 aaKnown RBP2.29□□□□□ -2.04
SPB1YCL054W RPS8BP0CX40 200 aaKnown RBP2.29□□□□□ -2.04
SPB1YCL054W NHP6BP11633 99 aaKnown RBP2.29□□□□□ -2.04
SPB1YCL054W POP5P28005 173 aa2.29□□□□□ -2.04
SPB1YCL054W FUN26P31381 517 aa2.29□□□□□ -2.04
SPB1YCL054W PMT2P31382 759 aa2.29□□□□□ -2.04
SPB1YCL054W VMA6P32366 345 aaKnown RBP2.29□□□□□ -2.04
SPB1YCL054W SPS19P32573 292 aaKnown RBP2.29□□□□□ -2.04
SPB1YCL054W FHL1P39521 936 aa2.29□□□□□ -2.04
SPB1YCL054W YJR030CP47101 745 aa2.29□□□□□ -2.04
SPB1YCL054W SUR7P54003 302 aa2.29□□□□□ -2.04
SPB1YCL054W TRM82Q03774 444 aa2.29□□□□□ -2.04
SPB1YCL054W YHC1Q05900 231 aaKnown RBP2.29□□□□□ -2.04
SPB1YCL054W SNA4Q07549 140 aa2.29□□□□□ -2.04
SPB1YCL054W YLR012CQ07927 99 aa2.29□□□□□ -2.04
SPB1YCL054W VIK1Q12045 647 aa2.29□□□□□ -2.04
SPB1YCL054W YKL183C-AQ3E765 70 aa2.29□□□□□ -2.04
SPB1YCL054W RPL31AP0C2H8 113 aaKnown RBP2.28□□□□□ -2.04
SPB1YCL054W REV1P12689 985 aa2.28□□□□□ -2.04
SPB1YCL054W DEP1P31385 405 aa2.28□□□□□ -2.04
SPB1YCL054W CBT1P36038 271 aaPredicted RBP2.28□□□□□ -2.04
SPB1YCL054W MTC6P38849 526 aa2.28□□□□□ -2.04
SPB1YCL054W PTI1P39927 425 aaPredicted RBP2.28□□□□□ -2.04
SPB1YCL054W UFE1P41834 346 aa2.28□□□□□ -2.04
SPB1YCL054W GDS1P41913 522 aa2.28□□□□□ -2.04
SPB1YCL054W TMA22P47089 198 aaPredicted RBP2.28□□□□□ -2.04
SPB1YCL054W HOC1P47124 396 aa2.28□□□□□ -2.04
SPB1YCL054W YJR085CP47131 105 aaKnown RBP2.28□□□□□ -2.04
SPB1YCL054W MSO1P53604 210 aaKnown RBP2.28□□□□□ -2.04
SPB1YCL054W VBA1Q04301 562 aa2.28□□□□□ -2.04
SPB1YCL054W TAF9Q05027 157 aa2.28□□□□□ -2.04
SPB1YCL054W ASR1Q06834 288 aa2.28□□□□□ -2.04
SPB1YCL054W YER078W-AQ3E7A2 54 aa2.28□□□□□ -2.04
SPB1YCL054W MEX67Q99257 599 aaKnown RBP2.28□□□□□ -2.04
SPB1YCL054W PRP8P33334 2413 aaKnown RBP2.28□□□□□ -2.04
SPB1YCL054W QCR7P00128 127 aa2.28□□□□□ -2.04
SPB1YCL054W TRP1P00912 224 aa2.28□□□□□ -2.04
SPB1YCL054W SUR2P38992 349 aa2.28□□□□□ -2.04
SPB1YCL054W YRB1P41920 201 aaKnown RBP2.28□□□□□ -2.04
SPB1YCL054W MIG2P53035 382 aa2.28□□□□□ -2.04
SPB1YCL054W IMP4P53941 290 aaKnown RBP2.28□□□□□ -2.04
SPB1YCL054W ELP3Q02908 557 aaKnown RBP2.28□□□□□ -2.04
SPB1YCL054W SCS7Q03529 384 aa2.28□□□□□ -2.04
SPB1YCL054W RRP17Q04031 235 aaPredicted RBP2.28□□□□□ -2.04
SPB1YCL054W KRE28Q04431 385 aa2.28□□□□□ -2.04
SPB1YCL054W MFG1Q07684 458 aa2.28□□□□□ -2.04
SPB1YCL054W YOR387CQ08910 206 aa2.28□□□□□ -2.04
SPB1YCL054W TMS1Q12116 473 aa2.28□□□□□ -2.04
SPB1YCL054W FCY22Q12119 530 aa2.28□□□□□ -2.04
SPB1YCL054W POL2P21951 2222 aaKnown RBP2.28□□□□□ -2.04
SPB1YCL054W RPS3P05750 240 aaKnown RBP2.27□□□□□ -2.05
SPB1YCL054W CPR1P14832 162 aaKnown RBP2.27□□□□□ -2.05
SPB1YCL054W RPL24BP24000 155 aaKnown RBP2.27□□□□□ -2.05
SPB1YCL054W MCH2P36032 473 aa2.27□□□□□ -2.05
SPB1YCL054W YPC1P38298 316 aa2.27□□□□□ -2.05
SPB1YCL054W MIC12P38341 106 aa2.27□□□□□ -2.05
SPB1YCL054W YMR262WP38430 313 aa2.27□□□□□ -2.05
SPB1YCL054W NPT1P39683 429 aaKnown RBP2.27□□□□□ -2.05
SPB1YCL054W YER121WP40076 114 aa2.27□□□□□ -2.05
SPB1YCL054W YER189WP40104 122 aa2.27□□□□□ -2.05
SPB1YCL054W BNS1P50084 137 aa2.27□□□□□ -2.05
SPB1YCL054W YNL040WP53960 456 aaPredicted RBP2.27□□□□□ -2.05
SPB1YCL054W ADH6Q04894 360 aaKnown RBP2.27□□□□□ -2.05
SPB1YCL054W YMR226CQ05016 267 aaKnown RBP2.27□□□□□ -2.05
SPB1YCL054W BER1Q06688 274 aaKnown RBP2.27□□□□□ -2.05
SPB1YCL054W YDL114WQ07530 308 aa2.27□□□□□ -2.05
SPB1YCL054W HNT3Q08702 217 aa2.27□□□□□ -2.05
SPB1YCL054W CSF1Q12150 2958 aa2.27□□□□□ -2.05
SPB1YCL054W YCL021W-AQ96VH3 125 aa2.27□□□□□ -2.05
SPB1YCL054W BI3Q9ZZW7 517 aa2.27□□□□□ -2.05
SPB1YCL054W HFA1P32874 2273 aa2.27□□□□□ -2.05
SPB1YCL054W GCN1P33892 2672 aaKnown RBP2.27□□□□□ -2.05
SPB1YCL054W YDR157WA0A023PZE8 133 aa2.27□□□□□ -2.05
SPB1YCL054W RPL23AP0CX41 137 aaKnown RBP2.27□□□□□ -2.05
SPB1YCL054W RPL23BP0CX42 137 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms