RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W CDC31P06704 161 aaKnown RBP1.99□□□□□ -2.09
NUP170YBL079W SED4P25365 1065 aa1.99□□□□□ -2.09
NUP170YBL079W PPA2P28239 310 aa1.99□□□□□ -2.09
NUP170YBL079W UTR5P32630 166 aa1.99□□□□□ -2.09
NUP170YBL079W YKR078WP36158 585 aaKnown RBP1.99□□□□□ -2.09
NUP170YBL079W YBR063CP38083 404 aa1.99□□□□□ -2.09
NUP170YBL079W LAG1P38703 411 aa1.99□□□□□ -2.09
NUP170YBL079W LNP1P38878 278 aa1.99□□□□□ -2.09
NUP170YBL079W YJL213WP40896 331 aa1.99□□□□□ -2.09
NUP170YBL079W PRY1P47032 299 aa1.99□□□□□ -2.09
NUP170YBL079W IMO32P53219 342 aa1.99□□□□□ -2.09
NUP170YBL079W SKO1Q02100 647 aa1.99□□□□□ -2.09
NUP170YBL079W YMR315WQ04869 349 aaKnown RBP1.99□□□□□ -2.09
NUP170YBL079W RRG8Q06109 277 aa1.99□□□□□ -2.09
NUP170YBL079W TDA6Q06466 467 aa1.99□□□□□ -2.09
NUP170YBL079W DGK1Q12382 290 aa1.99□□□□□ -2.09
NUP170YBL079W WHI5Q12416 295 aa1.99□□□□□ -2.09
NUP170YBL079W FOL3Q12676 427 aaPredicted RBP1.99□□□□□ -2.09
NUP170YBL079W ATG40Q99325 256 aa1.99□□□□□ -2.09
NUP170YBL079W ATP6P00854 259 aa1.99□□□□□ -2.09
NUP170YBL079W FPS1P23900 669 aa1.99□□□□□ -2.09
NUP170YBL079W ACH1P32316 526 aa1.99□□□□□ -2.09
NUP170YBL079W SHM2P37291 469 aaKnown RBP1.99□□□□□ -2.09
NUP170YBL079W YFR035CP43608 114 aa1.99□□□□□ -2.09
NUP170YBL079W SFH5P47008 294 aa1.99□□□□□ -2.09
NUP170YBL079W YLR152CP54072 576 aa1.99□□□□□ -2.09
NUP170YBL079W DLT1Q04216 342 aa1.99□□□□□ -2.09
NUP170YBL079W DYN3Q04949 312 aa1.99□□□□□ -2.09
NUP170YBL079W PEX30Q06169 523 aa1.99□□□□□ -2.09
NUP170YBL079W ACM1Q08981 209 aa1.99□□□□□ -2.09
NUP170YBL079W TMA46Q12000 345 aaKnown RBP1.99□□□□□ -2.09
NUP170YBL079W YDL009CQ12210 107 aa1.99□□□□□ -2.09
NUP170YBL079W MTC7P32633 139 aa1.98□□□□□ -2.09
NUP170YBL079W REC114P32841 428 aa1.98□□□□□ -2.09
NUP170YBL079W MDL1P33310 695 aa1.98□□□□□ -2.09
NUP170YBL079W YNK1P36010 153 aaKnown RBP1.98□□□□□ -2.09
NUP170YBL079W ANS1P38832 159 aa1.98□□□□□ -2.09
NUP170YBL079W SMB1P40018 196 aaKnown RBP1.98□□□□□ -2.09
NUP170YBL079W YIL012WP40551 113 aa1.98□□□□□ -2.09
NUP170YBL079W YFL012WP43580 148 aa1.98□□□□□ -2.09
NUP170YBL079W BNA6P43619 295 aa1.98□□□□□ -2.09
NUP170YBL079W HMS2P47175 358 aa1.98□□□□□ -2.09
NUP170YBL079W MPA43P53583 542 aaPredicted RBP1.98□□□□□ -2.09
NUP170YBL079W FMN1Q03778 218 aa1.98□□□□□ -2.09
NUP170YBL079W YHC1Q05900 231 aaKnown RBP1.98□□□□□ -2.09
NUP170YBL079W YOL162WP0CF19 215 aa1.98□□□□□ -2.09
NUP170YBL079W SPS100P13130 326 aa1.98□□□□□ -2.09
NUP170YBL079W PET9P18239 318 aaKnown RBP1.98□□□□□ -2.09
NUP170YBL079W ECT1P33412 323 aa1.98□□□□□ -2.09
NUP170YBL079W MTC2P34246 357 aa1.98□□□□□ -2.09
NUP170YBL079W CTF8P38877 133 aa1.98□□□□□ -2.09
NUP170YBL079W PHM8P40025 321 aa1.98□□□□□ -2.09
NUP170YBL079W PFS2P42841 465 aaKnown RBP1.98□□□□□ -2.09
NUP170YBL079W AGP3P43548 558 aa1.98□□□□□ -2.09
NUP170YBL079W BNA2P47125 453 aa1.98□□□□□ -2.09
NUP170YBL079W NQM1P53228 333 aaPredicted RBP1.98□□□□□ -2.09
NUP170YBL079W GPI1P53306 609 aa1.98□□□□□ -2.09
NUP170YBL079W RAD28Q12021 506 aa1.98□□□□□ -2.09
NUP170YBL079W YLR108CQ12259 485 aa1.98□□□□□ -2.09
NUP170YBL079W SNF8Q12483 233 aa1.98□□□□□ -2.09
NUP170YBL079W YOR343CQ12484 108 aa1.98□□□□□ -2.09
NUP170YBL079W COX9P07255 59 aa1.98□□□□□ -2.09
NUP170YBL079W YER190C-BP0CX94 160 aa1.98□□□□□ -2.09
NUP170YBL079W YEL077W-AP0CX95 160 aa1.98□□□□□ -2.09
NUP170YBL079W YGR296C-BP0CX96 160 aa1.98□□□□□ -2.09
NUP170YBL079W YPL283W-BP0CX97 160 aa1.98□□□□□ -2.09
NUP170YBL079W YPR204C-AP0CX98 160 aa1.98□□□□□ -2.09
NUP170YBL079W YFL068WP0CX99 160 aa1.98□□□□□ -2.09
NUP170YBL079W YLL066W-AP0CY00 160 aa1.98□□□□□ -2.09
NUP170YBL079W YLL067W-AP0CY01 160 aa1.98□□□□□ -2.09
NUP170YBL079W NRP1P32770 719 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
NUP170YBL079W TCM62P38228 572 aaKnown RBP1.98□□□□□ -2.09
NUP170YBL079W PRS2P38620 318 aaKnown RBP1.98□□□□□ -2.09
NUP170YBL079W YRB2P40517 327 aa1.98□□□□□ -2.09
NUP170YBL079W EGT2P42835 1041 aa1.98□□□□□ -2.09
NUP170YBL079W YJR142WP47173 342 aa1.98□□□□□ -2.09
NUP170YBL079W RSM27P53305 110 aa1.98□□□□□ -2.09
NUP170YBL079W SSU72P53538 206 aaPredicted RBP1.98□□□□□ -2.09
NUP170YBL079W TDA1Q03533 586 aa1.98□□□□□ -2.09
NUP170YBL079W MRX8Q05473 314 aa1.98□□□□□ -2.09
NUP170YBL079W LOT6Q07923 191 aa1.98□□□□□ -2.09
NUP170YBL079W HRD1Q08109 551 aa1.98□□□□□ -2.09
NUP170YBL079W MIM1Q08176 113 aa1.98□□□□□ -2.09
NUP170YBL079W BSC1Q12140 328 aa1.98□□□□□ -2.09
NUP170YBL079W NFI1Q12216 726 aa1.98□□□□□ -2.09
NUP170YBL079W RIB2Q12362 591 aaKnown RBP1.98□□□□□ -2.09
NUP170YBL079W YPL247CQ12523 523 aa1.98□□□□□ -2.09
NUP170YBL079W YCR075W-AQ3E830 75 aa1.98□□□□□ -2.09
NUP170YBL079W RPD3P32561 433 aa1.98□□□□□ -2.09
NUP170YBL079W PEP12P32854 288 aa1.98□□□□□ -2.09
NUP170YBL079W YEL068CP39977 110 aa1.98□□□□□ -2.09
NUP170YBL079W RIO2P40160 425 aaKnown RBP1.98□□□□□ -2.09
NUP170YBL079W RPL13BP40212 199 aaKnown RBP1.98□□□□□ -2.09
NUP170YBL079W RTS2P40962 232 aa1.98□□□□□ -2.09
NUP170YBL079W TTI2P47168 421 aa1.98□□□□□ -2.09
NUP170YBL079W SUB1P54000 292 aaKnown RBP1.98□□□□□ -2.09
NUP170YBL079W RPL13AQ12690 199 aaPredicted RBP1.98□□□□□ -2.09
NUP170YBL079W YHR214C-EQ8TGK0 99 aa1.98□□□□□ -2.09
NUP170YBL079W TY1A-HP0C2I4 478 aaKnown RBP1.97□□□□□ -2.09
NUP170YBL079W YKR015CP36111 568 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms