RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C DIG2Q03373 323 aaKnown RBP5.82□□□□□ -1.48
LDB7YBL006C MSS11Q03825 758 aa5.82□□□□□ -1.48
LDB7YBL006C MRX8Q05473 314 aa5.82□□□□□ -1.48
LDB7YBL006C LOT6Q07923 191 aa5.82□□□□□ -1.48
LDB7YBL006C YLR108CQ12259 485 aa5.82□□□□□ -1.48
LDB7YBL006C KIN28P06242 306 aa5.81□□□□□ -1.48
LDB7YBL006C FUN19P28003 413 aaPredicted RBP5.81□□□□□ -1.48
LDB7YBL006C MRT4P33201 236 aaKnown RBP5.81□□□□□ -1.48
LDB7YBL006C AST1P35183 429 aa5.81□□□□□ -1.48
LDB7YBL006C MCH2P36032 473 aa5.81□□□□□ -1.48
LDB7YBL006C CTR2P38865 189 aa5.81□□□□□ -1.48
LDB7YBL006C IPT1P38954 527 aa5.81□□□□□ -1.48
LDB7YBL006C ECM1P39715 212 aa5.81□□□□□ -1.48
LDB7YBL006C PUG1P40100 303 aa5.81□□□□□ -1.48
LDB7YBL006C ATF1P40353 525 aa5.81□□□□□ -1.48
LDB7YBL006C SNL1P40548 159 aa5.81□□□□□ -1.48
LDB7YBL006C SWP82P43554 623 aa5.81□□□□□ -1.48
LDB7YBL006C VOA1P53262 265 aa5.81□□□□□ -1.48
LDB7YBL006C DUG3P53871 357 aa5.81□□□□□ -1.48
LDB7YBL006C SAM50P53969 484 aa5.81□□□□□ -1.48
LDB7YBL006C YDC1Q02896 317 aa5.81□□□□□ -1.48
LDB7YBL006C SNZ1Q03148 297 aa5.81□□□□□ -1.48
LDB7YBL006C AIM6Q07716 390 aa5.81□□□□□ -1.48
LDB7YBL006C MSA1Q08471 629 aa5.81□□□□□ -1.48
LDB7YBL006C TDH3P00359 332 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
LDB7YBL006C YPK3P38070 525 aa5.8□□□□□ -1.48
LDB7YBL006C SLM4P38247 162 aa5.8□□□□□ -1.48
LDB7YBL006C ARO9P38840 513 aaPredicted RBP5.8□□□□□ -1.48
LDB7YBL006C YRB2P40517 327 aa5.8□□□□□ -1.48
LDB7YBL006C GZF3P42944 551 aaKnown RBP5.8□□□□□ -1.48
LDB7YBL006C YHC3P47040 408 aa5.8□□□□□ -1.48
LDB7YBL006C BNA2P47125 453 aa5.8□□□□□ -1.48
LDB7YBL006C SAY1P53324 424 aa5.8□□□□□ -1.48
LDB7YBL006C HHT1P61830 136 aa5.8□□□□□ -1.48
LDB7YBL006C PRM15Q03262 622 aa5.8□□□□□ -1.48
LDB7YBL006C YMD8Q03697 442 aa5.8□□□□□ -1.48
LDB7YBL006C DLT1Q04216 342 aa5.8□□□□□ -1.48
LDB7YBL006C PCL9Q12477 304 aa5.8□□□□□ -1.48
LDB7YBL006C YBL113CQ7M4S9 792 aa5.8□□□□□ -1.48
LDB7YBL006C MDN1Q12019 4910 aaKnown RBP5.8□□□□□ -1.48
LDB7YBL006C ATR1P13090 542 aa5.79□□□□□ -1.48
LDB7YBL006C APA2P22108 325 aa5.79□□□□□ -1.48
LDB7YBL006C FPS1P23900 669 aa5.79□□□□□ -1.48
LDB7YBL006C DEG1P31115 442 aaKnown RBP5.79□□□□□ -1.48
LDB7YBL006C PEP12P32854 288 aa5.79□□□□□ -1.48
LDB7YBL006C YKR015CP36111 568 aa5.79□□□□□ -1.48
LDB7YBL006C BAP2P38084 609 aa5.79□□□□□ -1.48
LDB7YBL006C ARC40P38328 384 aaKnown RBP5.79□□□□□ -1.48
LDB7YBL006C YHR035WP38769 630 aa5.79□□□□□ -1.48
LDB7YBL006C SGN1P40561 250 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
LDB7YBL006C SUT1P53032 299 aaKnown RBP5.79□□□□□ -1.48
LDB7YBL006C YIP4P53093 235 aa5.79□□□□□ -1.48
LDB7YBL006C SMM1P53720 384 aaKnown RBP5.79□□□□□ -1.48
LDB7YBL006C YMR099CQ03161 297 aaKnown RBP5.79□□□□□ -1.48
LDB7YBL006C RIM9Q04734 239 aa5.79□□□□□ -1.48
LDB7YBL006C YLR345WQ06137 509 aa5.79□□□□□ -1.48
LDB7YBL006C PST2Q12335 198 aaKnown RBP5.79□□□□□ -1.48
LDB7YBL006C NAM2P11325 894 aa5.78□□□□□ -1.48
LDB7YBL006C RPA135P22138 1203 aaKnown RBP5.78□□□□□ -1.48
LDB7YBL006C REC114P32841 428 aa5.78□□□□□ -1.48
LDB7YBL006C ECT1P33412 323 aa5.78□□□□□ -1.48
LDB7YBL006C FRM2P37261 193 aa5.78□□□□□ -1.48
LDB7YBL006C TIR3P40552 269 aa5.78□□□□□ -1.48
LDB7YBL006C AAD14P42884 376 aa5.78□□□□□ -1.48
LDB7YBL006C RET2P43621 546 aa5.78□□□□□ -1.48
LDB7YBL006C YJL016WP47072 561 aa5.78□□□□□ -1.48
LDB7YBL006C GEP7P53171 287 aa5.78□□□□□ -1.48
LDB7YBL006C ERP6P53198 216 aa5.78□□□□□ -1.48
LDB7YBL006C MTL1P53214 551 aa5.78□□□□□ -1.48
LDB7YBL006C PXR1P53335 271 aaPredicted RBP5.78□□□□□ -1.48
LDB7YBL006C BUD17P53727 317 aa5.78□□□□□ -1.48
LDB7YBL006C YNR064CP53750 290 aa5.78□□□□□ -1.48
LDB7YBL006C APJ1P53940 528 aa5.78□□□□□ -1.48
LDB7YBL006C GPI17Q04080 534 aa5.78□□□□□ -1.48
LDB7YBL006C YPR098CQ06089 161 aa5.78□□□□□ -1.48
LDB7YBL006C ERP4Q12450 207 aa5.78□□□□□ -1.48
LDB7YBL006C SSE2P32590 693 aaKnown RBP5.77□□□□□ -1.49
LDB7YBL006C YOX1P34161 385 aa5.77□□□□□ -1.49
LDB7YBL006C PPT1P53043 513 aa5.77□□□□□ -1.49
LDB7YBL006C YNR048WP53740 393 aa5.77□□□□□ -1.49
LDB7YBL006C RNH201P53942 307 aa5.77□□□□□ -1.49
LDB7YBL006C ARP10Q04549 284 aa5.77□□□□□ -1.49
LDB7YBL006C YMR315WQ04869 349 aaKnown RBP5.77□□□□□ -1.49
LDB7YBL006C RKM1Q08961 583 aaPredicted RBP5.77□□□□□ -1.49
LDB7YBL006C ISA2Q12425 185 aa5.77□□□□□ -1.49
LDB7YBL006C NOP56Q12460 504 aaKnown RBP RIP-Chip data5.77□□□□□ -1.49not detected
LDB7YBL006C LSO1Q3E827 93 aa5.77□□□□□ -1.49
LDB7YBL006C SOD2P00447 233 aa5.76□□□□□ -1.49
LDB7YBL006C NDC1P32500 655 aa5.76□□□□□ -1.49
LDB7YBL006C GPI18P38211 433 aa5.76□□□□□ -1.49
LDB7YBL006C CIN2P46670 268 aa5.76□□□□□ -1.49
LDB7YBL006C AAH1P53909 347 aa5.76□□□□□ -1.49
LDB7YBL006C GRX5Q02784 150 aa5.76□□□□□ -1.49
LDB7YBL006C NOG1Q02892 647 aaKnown RBP5.76□□□□□ -1.49
LDB7YBL006C YMR087WQ04299 284 aa5.76□□□□□ -1.49
LDB7YBL006C YDR114CQ04597 100 aa5.76□□□□□ -1.49
LDB7YBL006C GAL83Q04739 417 aa5.76□□□□□ -1.49
LDB7YBL006C YMR317WQ04893 1140 aa5.76□□□□□ -1.49
LDB7YBL006C RFU1Q08003 200 aa5.76□□□□□ -1.49
LDB7YBL006C YOR378WQ08902 515 aa5.76□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 72.1 ms