RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 SCYL3Q8IZE3 742 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 HELQQ8TDG4 1101 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 UBLCP1Q8WVY7 318 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 DBR1Q9UK59 544 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 SNX24Q9Y343 169 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 GRIN2DO15399 1336 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 LCTP09848 1927 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 ADM5C9JUS6 153 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 TMEM253P0C7T8 217 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PYGMP11217 842 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 LMNB1P20700 586 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 MCM3P25205 808 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 GJC1P36383 396 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 SEC24CP53992 1094 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 TUBB4BP68371 445 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 ITIH3Q06033 890 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 DMP1Q13316 513 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PPP2R5AQ15172 486 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 STXBP4Q6ZWJ1 553 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 INTS8Q75QN2 995 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 C4orf19Q8IY42 314 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 C10orf67Q8IYJ2 551 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PARD3BQ8TEW8 1205 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 ACBD3Q9H3P7 528 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 KLHL11Q9NVR0 708 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 TSKSQ9UJT2 592 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PCDHA10Q9Y5I2 948 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 STK24Q9Y6E0 443 aa11.53□□□□□ -0.56
CDK5RAP3-225ENST00000582482 CSDE1O75534 798 aaKnown RBP11.52□□□□□ -0.56
CDK5RAP3-225ENST00000582482 SHBGP04278 402 aa11.52□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PGK2P07205 417 aa11.52□□□□□ -0.56
CDK5RAP3-225ENST00000582482 MAPTP10636 758 aaKnown RBP11.52□□□□□ -0.56
CDK5RAP3-225ENST00000582482 CCT5P48643 541 aa11.52□□□□□ -0.56
CDK5RAP3-225ENST00000582482 IRAK1P51617 712 aa11.52□□□□□ -0.56
CDK5RAP3-225ENST00000582482 TNNC1P63316 161 aa11.52□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PAK2Q13177 524 aa11.52□□□□□ -0.56
CDK5RAP3-225ENST00000582482 SNX1Q13596 522 aa11.52□□□□□ -0.56
CDK5RAP3-225ENST00000582482 TRIP13Q15645 432 aaPredicted RBP11.52□□□□□ -0.56
CDK5RAP3-225ENST00000582482 LEKR1Q6ZMV7 388 aa11.52□□□□□ -0.56
CDK5RAP3-225ENST00000582482 IQCKQ8N0W5 287 aa11.52□□□□□ -0.56
CDK5RAP3-225ENST00000582482 ATP8B4Q8TF62 1192 aa11.52□□□□□ -0.56
CDK5RAP3-225ENST00000582482 ATG4AQ8WYN0 398 aa11.52□□□□□ -0.56
CDK5RAP3-225ENST00000582482 CAVIN3Q969G5 261 aa11.52□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PWWP2AQ96N64 755 aa11.52□□□□□ -0.56
CDK5RAP3-225ENST00000582482 RUFY1Q96T51 708 aa11.52□□□□□ -0.56
CDK5RAP3-225ENST00000582482 SH3GL2Q99962 352 aa11.52□□□□□ -0.56
CDK5RAP3-225ENST00000582482 PAGR1Q9BTK6 254 aa11.52□□□□□ -0.56
CDK5RAP3-225ENST00000582482 JPH1Q9HDC5 661 aaPredicted RBP11.52□□□□□ -0.56
CDK5RAP3-225ENST00000582482 TBC1D22BQ9NU19 505 aa11.52□□□□□ -0.56
CDK5RAP3-225ENST00000582482 NCANO14594 1321 aa11.52□□□□□ -0.57
CDK5RAP3-225ENST00000582482 CCDC66A2RUB6 948 aa11.52□□□□□ -0.57
CDK5RAP3-225ENST00000582482 SPDYE16A6NNV3 312 aaPredicted RBP11.52□□□□□ -0.57
CDK5RAP3-225ENST00000582482 BTNL10A8MVZ5 291 aa11.52□□□□□ -0.57
CDK5RAP3-225ENST00000582482 TMOD1P28289 359 aa11.52□□□□□ -0.57
CDK5RAP3-225ENST00000582482 CCND2P30279 289 aa11.52□□□□□ -0.57
CDK5RAP3-225ENST00000582482 EMBQ6PCB8 327 aa11.52□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ARHGAP27Q6ZUM4 889 aa11.52□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ZBTB33Q86T24 672 aa11.52□□□□□ -0.57
CDK5RAP3-225ENST00000582482 SLC9A9Q8IVB4 645 aa11.52□□□□□ -0.57
CDK5RAP3-225ENST00000582482 GOLGA6L1Q8N7Z2 621 aa11.52□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ACTRT1Q8TDG2 376 aa11.52□□□□□ -0.57
CDK5RAP3-225ENST00000582482 TRAPPC12Q8WVT3 735 aa11.52□□□□□ -0.57
CDK5RAP3-225ENST00000582482 CLMNQ96JQ2 1002 aa11.52□□□□□ -0.57
CDK5RAP3-225ENST00000582482 NUP85Q9BW27 656 aa11.52□□□□□ -0.57
CDK5RAP3-225ENST00000582482 TAF1DQ9H5J8 278 aaPredicted RBP11.52□□□□□ -0.57
CDK5RAP3-225ENST00000582482 TMEM206Q9H813 350 aa11.52□□□□□ -0.57
CDK5RAP3-225ENST00000582482 BTBD7Q9P203 1132 aa11.52□□□□□ -0.57
CDK5RAP3-225ENST00000582482 SUCLA2Q9P2R7 463 aaPredicted RBP11.52□□□□□ -0.57
CDK5RAP3-225ENST00000582482 SSUH2Q9Y2M2 353 aa11.52□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ATP8A1Q9Y2Q0 1164 aa11.52□□□□□ -0.57
CDK5RAP3-225ENST00000582482 LRRIQ4A6NIV6 560 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 CYP11B1P15538 503 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 DSG3P32926 999 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 TNFSF9P41273 254 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 PSMC4P43686 418 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 CDR1P51861 262 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 NFIL3Q16649 462 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 GOLGA5Q8TBA6 731 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ZNF653Q96CK0 615 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ACSF2Q96CM8 615 aaPredicted RBP11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 FAM212AQ96EL1 285 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 TARS2Q9BW92 718 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 CYP26B1Q9NR63 512 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 KCND2Q9NZV8 630 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 PHIPQ8WWQ0 1821 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 MYH9P35579 1960 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 TUBBP07437 444 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 IRX5P78411 483 aaPredicted RBP11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 CYP24A1Q07973 514 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 TRAF1Q13077 416 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 TNFAIP1Q13829 316 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 LY6KQ17RY6 165 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ZNF394Q53GI3 561 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 MAP4K3Q8IVH8 894 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 OR5B17Q8NGF7 314 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 C1orf54Q8WWF1 131 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 SLC9A2Q9UBY0 812 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 TRPC6Q9Y210 931 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 AFG3L2Q9Y4W6 797 aa11.51□□□□□ -0.57
CDK5RAP3-225ENST00000582482 UBE4BO95155 1302 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms