RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 ACRP10323 421 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 CCND2P30279 289 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 HOXA13P31271 388 aaPredicted RBP8.69□□□□□ -1.02
CASP4-212ENST00000533730 RGS19P49795 217 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 ADCY7P51828 1080 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 TBX4P57082 545 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 SCRN1Q12765 414 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 AP3B2Q13367 1082 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 CBX2Q14781 532 aaPredicted RBP8.69□□□□□ -1.02
CASP4-212ENST00000533730 ME3Q16798 604 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 SLC10A6Q3KNW5 377 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 PRAMEF19Q5SWL8 479 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 SCARA3Q6AZY7 606 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 OVOS1Q6IE37 1185 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 DDX42Q86XP3 938 aaKnown RBP eCLIP8.69□□□□□ -1.02
CASP4-212ENST00000533730 DTWD1Q8N5C7 304 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 SCFD2Q8WU76 684 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 PHKBQ93100 1093 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 GTF3C6Q969F1 213 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 PDCD2LQ9BRP1 358 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 KATNBL1Q9H079 304 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 COL20A1Q9P218 1284 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 PCDHB10Q9UN67 800 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 ASTN1O14525 1302 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 FRMPD4Q14CM0 1322 aa8.69□□□□□ -1.02
CASP4-212ENST00000533730 A0A087X0B3 334 aa8.68□□□□□ -1.02
CASP4-212ENST00000533730 SMCO2A6NFE2 343 aa8.68□□□□□ -1.02
CASP4-212ENST00000533730 KBTBD13C9JR72 458 aa8.68□□□□□ -1.02
CASP4-212ENST00000533730 FAM229AH3BQW9 127 aa8.68□□□□□ -1.02
CASP4-212ENST00000533730 NKRFO15226 690 aaKnown RBP eCLIP8.68□□□□□ -1.02
CASP4-212ENST00000533730 SUSD5O60279 629 aa8.68□□□□□ -1.02
CASP4-212ENST00000533730 DEAF1O75398 565 aaPredicted RBP8.68□□□□□ -1.02
CASP4-212ENST00000533730 FARP2O94887 1054 aaPredicted RBP8.68□□□□□ -1.02
CASP4-212ENST00000533730 GSTP1P09211 210 aaKnown RBP8.68□□□□□ -1.02
CASP4-212ENST00000533730 EN2P19622 333 aaPredicted RBP8.68□□□□□ -1.02
CASP4-212ENST00000533730 EPHA1P21709 976 aa8.68□□□□□ -1.02
CASP4-212ENST00000533730 TNFAIP2Q03169 654 aa8.68□□□□□ -1.02
CASP4-212ENST00000533730 NCAPHQ15003 741 aa8.68□□□□□ -1.02
CASP4-212ENST00000533730 PKN1Q16512 942 aa8.68□□□□□ -1.02
CASP4-212ENST00000533730 GNPTABQ3T906 1256 aa8.68□□□□□ -1.02
CASP4-212ENST00000533730 GALNT17Q6IS24 598 aa8.68□□□□□ -1.02
CASP4-212ENST00000533730 KCNV1Q6PIU1 500 aa8.68□□□□□ -1.02
CASP4-212ENST00000533730 USP17L6PQ6QN14 398 aa8.68□□□□□ -1.02
CASP4-212ENST00000533730 UNC5AQ6ZN44 842 aa8.68□□□□□ -1.02
CASP4-212ENST00000533730 RNF180Q86T96 592 aa8.68□□□□□ -1.02
CASP4-212ENST00000533730 FMR1NBQ8N0W7 255 aaPredicted RBP8.68□□□□□ -1.02
CASP4-212ENST00000533730 TAB3Q8N5C8 712 aaPredicted RBP8.68□□□□□ -1.02
CASP4-212ENST00000533730 UBR7Q8N806 425 aa8.68□□□□□ -1.02
CASP4-212ENST00000533730 SHISA4Q96DD7 197 aa8.68□□□□□ -1.02
CASP4-212ENST00000533730 LLPHQ9BRT6 129 aaKnown RBP8.68□□□□□ -1.02
CASP4-212ENST00000533730 ZMYND12Q9H0C1 365 aa8.68□□□□□ -1.02
CASP4-212ENST00000533730 XPNPEP3Q9NQH7 507 aa8.68□□□□□ -1.02
CASP4-212ENST00000533730 Q9Y3F1 56 aa8.68□□□□□ -1.02
CASP4-212ENST00000533730 LCTP09848 1927 aa8.68□□□□□ -1.02
CASP4-212ENST00000533730 KRBA1A5PL33 1030 aa8.67□□□□□ -1.02
CASP4-212ENST00000533730 FAM86C2PA6NEL3 165 aa8.67□□□□□ -1.02
CASP4-212ENST00000533730 DNM1LO00429 736 aa8.67□□□□□ -1.02
CASP4-212ENST00000533730 GFRA2O00451 464 aa8.67□□□□□ -1.02
CASP4-212ENST00000533730 SPATA31C1P0DKV0 1188 aa8.67□□□□□ -1.02
CASP4-212ENST00000533730 TGFB3P10600 412 aa8.67□□□□□ -1.02
CASP4-212ENST00000533730 MYCLP12524 364 aaPredicted RBP8.67□□□□□ -1.02
CASP4-212ENST00000533730 NLRP5P59047 1200 aa8.67□□□□□ -1.02
CASP4-212ENST00000533730 HMGN5P82970 282 aaKnown RBP8.67□□□□□ -1.02
CASP4-212ENST00000533730 TTLL4Q14679 1199 aa8.67□□□□□ -1.02
CASP4-212ENST00000533730 SETDB1Q15047 1291 aa8.67□□□□□ -1.02
CASP4-212ENST00000533730 PGM5Q15124 567 aa8.67□□□□□ -1.02
CASP4-212ENST00000533730 LONRF2Q1L5Z9 754 aa8.67□□□□□ -1.02
CASP4-212ENST00000533730 DUSP28Q4G0W2 176 aa8.67□□□□□ -1.02
CASP4-212ENST00000533730 WIPI1Q5MNZ9 446 aaPredicted RBP8.67□□□□□ -1.02
CASP4-212ENST00000533730 TAPT1Q6NXT6 567 aa8.67□□□□□ -1.02
CASP4-212ENST00000533730 NECAB2Q7Z6G3 386 aa8.67□□□□□ -1.02
CASP4-212ENST00000533730 VSIG10LQ86VR7 867 aa8.67□□□□□ -1.02
CASP4-212ENST00000533730 FBXO16Q8IX29 292 aaPredicted RBP8.67□□□□□ -1.02
CASP4-212ENST00000533730 EXOC8Q8IYI6 725 aa8.67□□□□□ -1.02
CASP4-212ENST00000533730 WDR11Q9BZH6 1224 aa8.67□□□□□ -1.02
CASP4-212ENST00000533730 AP5M1Q9H0R1 490 aa8.67□□□□□ -1.02
CASP4-212ENST00000533730 UPF3AQ9H1J1 476 aaKnown RBP8.67□□□□□ -1.02
CASP4-212ENST00000533730 CAAP1Q9H8G2 361 aa8.67□□□□□ -1.02
CASP4-212ENST00000533730 ORC3Q9UBD5 711 aaPredicted RBP8.67□□□□□ -1.02
CASP4-212ENST00000533730 PCDHA4Q9UN74 947 aa8.67□□□□□ -1.02
CASP4-212ENST00000533730 KIF3AQ9Y496 699 aa8.67□□□□□ -1.02
CASP4-212ENST00000533730 LRRC37A2A6NM11 1700 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 SYNRGQ9UMZ2 1314 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 ZEB2O60315 1214 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 DNAJA2O60884 412 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 LARGE1O95461 756 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 CST5P28325 142 aaPredicted RBP8.66□□□□□ -1.02
CASP4-212ENST00000533730 ADCYAP1R1P41586 468 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 GJA9P57773 515 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 NKX3-2P78367 333 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 IKBKEQ14164 716 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 LRRC41Q15345 812 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 UBE2SQ16763 222 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 CT47A1Q5JQC4 288 aaPredicted RBP8.66□□□□□ -1.02
CASP4-212ENST00000533730 FOXB2Q5VYV0 432 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 UBE2Q1Q7Z7E8 422 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 NLRX1Q86UT6 975 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 NECAB1Q8N987 351 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 PCSK9Q8NBP7 692 aaKnown RBP8.66□□□□□ -1.02
CASP4-212ENST00000533730 DAGLBQ8NCG7 672 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms