RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 PYCARDQ9ULZ3 195 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 MYMKA6NI61 221 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 PRRG1O14668 218 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 OR1G1P47890 313 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 NME3Q13232 169 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 SLMAPQ14BN4 828 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 IQCB1Q15051 598 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 NXNQ6DKJ4 435 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 MORC4Q8TE76 937 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 IFT43Q96FT9 208 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 NUP85Q9BW27 656 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 STARD7Q9NQZ5 370 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 CAMTA1Q9Y6Y1 1673 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 H3BRJ5 948 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 ZNF500O60304 480 aaPredicted RBP11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 MOCS2O96007 188 aaPredicted RBP11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 CLTAP09496 248 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 CXCR5P32302 372 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 PNPLA4P41247 253 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 DR1Q01658 176 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 CATSPER3Q86XQ3 398 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 PPFIBP2Q8ND30 876 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 EPB41L5Q9HCM4 733 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 PARVAQ9NVD7 372 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 DDX56Q9NY93 547 aaKnown RBP11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 TJP2Q9UDY2 1190 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 FOXN1O15353 648 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 EXTL3O43909 919 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 HOXC6P09630 235 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 METTL16Q86W50 562 aaKnown RBP11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 SPATA24Q86W54 205 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 FSD1LQ9BXM9 530 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 TMEM60Q9H2L4 133 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 TUBE1Q9UJT0 475 aa11.03□□□□□ -0.64
NIPAL3-201ENST00000003912 TCRBV5S4A2TA0A5A2 114 aa11.02□□□□□ -0.64
NIPAL3-201ENST00000003912 CCDC188H7C350 402 aa11.02□□□□□ -0.64
NIPAL3-201ENST00000003912 NPTXRO95502 500 aa11.02□□□□□ -0.64
NIPAL3-201ENST00000003912 FTLP02792 175 aaPredicted RBP11.02□□□□□ -0.64
NIPAL3-201ENST00000003912 NPEPPSP55786 919 aa11.02□□□□□ -0.64
NIPAL3-201ENST00000003912 TGFB3P10600 412 aa11.02□□□□□ -0.64
NIPAL3-201ENST00000003912 LCP1P13796 627 aa11.02□□□□□ -0.64
NIPAL3-201ENST00000003912 FDPSP14324 419 aaKnown RBP11.02□□□□□ -0.64
NIPAL3-201ENST00000003912 DPYDQ12882 1025 aa11.02□□□□□ -0.64
NIPAL3-201ENST00000003912 PPIL2Q13356 520 aa11.02□□□□□ -0.64
NIPAL3-201ENST00000003912 KRT33BQ14525 404 aa11.02□□□□□ -0.64
NIPAL3-201ENST00000003912 CYP4F22Q6NT55 531 aa11.02□□□□□ -0.64
NIPAL3-201ENST00000003912 FAF2Q96CS3 445 aa11.02□□□□□ -0.64
NIPAL3-201ENST00000003912 CABS1Q96KC9 395 aa11.02□□□□□ -0.64
NIPAL3-201ENST00000003912 COLEC11Q9BWP8 271 aa11.02□□□□□ -0.64
NIPAL3-201ENST00000003912 SP110Q9HB58 689 aa11.02□□□□□ -0.64
NIPAL3-201ENST00000003912 VWA5AO00534 786 aa11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 ALDH7A1P49419 539 aaKnown RBP11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 EPHB4P54760 987 aa11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 CENPUQ71F23 418 aa11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 ADSSL1Q8N142 457 aa11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 SH3TC2Q8TF17 1288 aa11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 SYNPO2Q9UMS6 1093 aa11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 FGGP02679 453 aa11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 MYBP10242 640 aa11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 ZFXP17010 805 aaPredicted RBP11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 BBS9Q3SYG4 887 aa11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 TRIM42Q8IWZ5 723 aa11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 SYTL5Q8TDW5 730 aaPredicted RBP11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 WDR35Q9P2L0 1181 aa11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 METTL7BQ6UX53 244 aa11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 SYT2Q8N9I0 419 aaPredicted RBP11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 STKLD1Q8NE28 680 aa11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 SEPT8Q92599 483 aa11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 VPS39Q96JC1 886 aa11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 MED15Q96RN5 788 aa11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 ASCC2Q9H1I8 757 aaPredicted RBP11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 RIOX1Q9H6W3 641 aa11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 PCSK1NQ9UHG2 260 aa11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 BCAP29Q9UHQ4 241 aa11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 HEY1Q9Y5J3 304 aa11.02□□□□□ -0.65
NIPAL3-201ENST00000003912 PALMO75781 387 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 TRIP13Q15645 432 aaPredicted RBP11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 PDCD2LQ9BRP1 358 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 MKNK1Q9BUB5 465 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 SPON2Q9BUD6 331 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 MAGEB5Q9BZ81 275 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 TRPC7Q9HCX4 862 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 APEX2Q9UBZ4 518 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 UBQLN1Q9UMX0 589 aaKnown RBP11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 TAF6LQ9Y6J9 622 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 PODXLO00592 558 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 FMO5P49326 533 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 GFPT1Q06210 699 aaPredicted RBP11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 SEC23AQ15436 765 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 ACCSLQ4AC99 568 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 MYLK4Q86YV6 388 aaPredicted RBP11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 C10orf67Q8IYJ2 551 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 MCUQ8NE86 351 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 NFIBO00712 420 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 ITPRIPL1Q6GPH6 555 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 CHADLQ6NUI6 762 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 PCGF5Q86SE9 256 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 CD302Q8IX05 232 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 PDCD6IPQ8WUM4 868 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms