RNA–Protein interactions for RNA: tY(GUA)J2

SUP4, Transcript of Tyrosine tRNA (tRNA-Tyr), predicted by tRNAscan-SE analysis, yeast

Gene SUP4, Length 75 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP4	tY(GUA)J2	SLS1	P42900	643 aa		5.34	□□□□□ -1.55
SUP4	tY(GUA)J2	POP6	P53218	158 aa		5.34	□□□□□ -1.55
SUP4	tY(GUA)J2	SUN4	P53616	420 aa		5.34	□□□□□ -1.55
SUP4	tY(GUA)J2	MPP6	P53725	186 aa	Predicted RBP	5.34	□□□□□ -1.55
SUP4	tY(GUA)J2	CTF19	Q02732	369 aa		5.34	□□□□□ -1.55
SUP4	tY(GUA)J2	EKI1	Q03764	534 aa		5.34	□□□□□ -1.55
SUP4	tY(GUA)J2	SIZ1	Q04195	904 aa		5.34	□□□□□ -1.55
SUP4	tY(GUA)J2	MRX8	Q05473	314 aa		5.34	□□□□□ -1.55
SUP4	tY(GUA)J2	BNA5	Q05979	453 aa		5.34	□□□□□ -1.55
SUP4	tY(GUA)J2	DIC1	Q06143	298 aa		5.34	□□□□□ -1.55
SUP4	tY(GUA)J2	YLR031W	Q07978	186 aa		5.34	□□□□□ -1.55
SUP4	tY(GUA)J2	RSC58	Q07979	502 aa		5.34	□□□□□ -1.55
SUP4	tY(GUA)J2	YOL073C	Q08232	322 aa		5.34	□□□□□ -1.55
SUP4	tY(GUA)J2	RDR1	Q08904	546 aa		5.34	□□□□□ -1.55
SUP4	tY(GUA)J2	RLM1	Q12224	676 aa		5.34	□□□□□ -1.55
SUP4	tY(GUA)J2	SET6	Q12529	373 aa		5.34	□□□□□ -1.55
SUP4	tY(GUA)J2	YBR085C-A	O43137	85 aa		5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	MXR2	P25566	168 aa		5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	CWH43	P25618	953 aa		5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	MRP17	P28778	131 aa		5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	TAF14	P35189	244 aa		5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	RPS27A	P35997	82 aa	Known RBP	5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	MRPL36	P36531	177 aa		5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	YBR238C	P38330	731 aa	Known RBP	5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	RPS27B	P38711	82 aa		5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	AIM46	P38885	310 aa		5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	QDR1	P40475	563 aa		5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	YIL067C	P40514	678 aa		5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	SYS1	P41544	203 aa		5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	SHR5	P41912	237 aa		5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	LSM1	P47017	172 aa	Known RBP	5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	LYS20	P48570	428 aa	Known RBP	5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	SEH1	P53011	349 aa	Known RBP	5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	RSM27	P53305	110 aa		5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	RHO5	P53879	331 aa	Known RBP	5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	ASI3	P53983	676 aa		5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	ARG5,6	Q01217	863 aa		5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	KAP120	Q02932	1032 aa		5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	DLT1	Q04216	342 aa		5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	MRPL1	Q04599	285 aa		5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	GAS2	Q06135	555 aa		5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	MCP1	Q12106	302 aa		5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	LYS21	Q12122	440 aa	Known RBP	5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	YDR034W-B	Q6Q5X2	51 aa		5.33	□□□□□ -1.56
SUP4	tY(GUA)J2	TDH2	P00358	332 aa	Known RBP	5.32	□□□□□ -1.56
SUP4	tY(GUA)J2	ARF1	P11076	181 aa	Known RBP	5.32	□□□□□ -1.56
SUP4	tY(GUA)J2	DAT1	P13483	248 aa	Known RBP	5.32	□□□□□ -1.56
SUP4	tY(GUA)J2	CKS1	P20486	150 aa	Known RBP	5.32	□□□□□ -1.56
SUP4	tY(GUA)J2	CPR2	P23285	205 aa		5.32	□□□□□ -1.56
SUP4	tY(GUA)J2	RPC34	P32910	317 aa		5.32	□□□□□ -1.56
SUP4	tY(GUA)J2	SRP102	P36057	244 aa	Predicted RBP	5.32	□□□□□ -1.56
SUP4	tY(GUA)J2	TCM62	P38228	572 aa	Known RBP	5.32	□□□□□ -1.56
SUP4	tY(GUA)J2	GEP4	P38812	185 aa		5.32	□□□□□ -1.56
SUP4	tY(GUA)J2	YIL086C	P40503	102 aa		5.32	□□□□□ -1.56
SUP4	tY(GUA)J2	TIR3	P40552	269 aa		5.32	□□□□□ -1.56
SUP4	tY(GUA)J2	TRM9	P49957	279 aa		5.32	□□□□□ -1.56
SUP4	tY(GUA)J2	UBC12	P52491	188 aa		5.32	□□□□□ -1.56
SUP4	tY(GUA)J2	YGR042W	P53227	271 aa		5.32	□□□□□ -1.56
SUP4	tY(GUA)J2	YLR152C	P54072	576 aa		5.32	□□□□□ -1.56
SUP4	tY(GUA)J2	SYC1	Q08553	188 aa	Predicted RBP	5.32	□□□□□ -1.56
SUP4	tY(GUA)J2	REX3	Q12090	404 aa		5.32	□□□□□ -1.56
SUP4	tY(GUA)J2	TMS1	Q12116	473 aa		5.32	□□□□□ -1.56
SUP4	tY(GUA)J2	YGL194C-A	Q2V2P6	80 aa		5.32	□□□□□ -1.56
SUP4	tY(GUA)J2	RPS13	P05756	151 aa	Known RBP	5.31	□□□□□ -1.56
SUP4	tY(GUA)J2	MATALPHA1	P0CY06	175 aa		5.31	□□□□□ -1.56
SUP4	tY(GUA)J2	HMLALPHA1	P0CY07	175 aa		5.31	□□□□□ -1.56
SUP4	tY(GUA)J2	RPB8	P20436	146 aa		5.31	□□□□□ -1.56
SUP4	tY(GUA)J2	AIM17	P23180	465 aa	Known RBP	5.31	□□□□□ -1.56
SUP4	tY(GUA)J2	KRR1	P25586	316 aa	Predicted RBP	5.31	□□□□□ -1.56
SUP4	tY(GUA)J2	DBF20	P32328	564 aa		5.31	□□□□□ -1.56
SUP4	tY(GUA)J2	LTP1	P40347	161 aa		5.31	□□□□□ -1.56
SUP4	tY(GUA)J2	NAS2	P40555	220 aa		5.31	□□□□□ -1.56
SUP4	tY(GUA)J2	SCY1	P53009	804 aa		5.31	□□□□□ -1.56
SUP4	tY(GUA)J2	BRR6	P53062	197 aa		5.31	□□□□□ -1.56
SUP4	tY(GUA)J2	FMP48	P53233	369 aa		5.31	□□□□□ -1.56
SUP4	tY(GUA)J2	GTF1	P53260	183 aa	Predicted RBP	5.31	□□□□□ -1.56
SUP4	tY(GUA)J2	YGR266W	P53326	701 aa		5.31	□□□□□ -1.56
SUP4	tY(GUA)J2	SCW4	P53334	386 aa	Known RBP	5.31	□□□□□ -1.56
SUP4	tY(GUA)J2	CWC25	P53854	179 aa	Known RBP	5.31	□□□□□ -1.56
SUP4	tY(GUA)J2	PEX25	Q02969	394 aa		5.31	□□□□□ -1.56
SUP4	tY(GUA)J2	TPP1	Q03796	238 aa		5.31	□□□□□ -1.56
SUP4	tY(GUA)J2	SNX41	Q04053	625 aa		5.31	□□□□□ -1.56
SUP4	tY(GUA)J2	IRC19	Q07843	230 aa		5.31	□□□□□ -1.56
SUP4	tY(GUA)J2	YOR385W	Q08909	290 aa		5.31	□□□□□ -1.56
SUP4	tY(GUA)J2	AEP3	Q12089	606 aa		5.31	□□□□□ -1.56
SUP4	tY(GUA)J2	TFB5	Q3E7C1	72 aa	Predicted RBP	5.31	□□□□□ -1.56
SUP4	tY(GUA)J2	YOS9	Q99220	542 aa		5.31	□□□□□ -1.56
SUP4	tY(GUA)J2	MSW1	P04803	379 aa		5.3	□□□□□ -1.56
SUP4	tY(GUA)J2	RPP1A	P05318	106 aa	Predicted RBP	5.3	□□□□□ -1.56
SUP4	tY(GUA)J2	CHO1	P08456	276 aa		5.3	□□□□□ -1.56
SUP4	tY(GUA)J2	GLK1	P17709	500 aa	Known RBP	5.3	□□□□□ -1.56
SUP4	tY(GUA)J2	STE18	P18852	110 aa		5.3	□□□□□ -1.56
SUP4	tY(GUA)J2	YCR061W	P25639	631 aa		5.3	□□□□□ -1.56
SUP4	tY(GUA)J2	SNC2	P33328	115 aa		5.3	□□□□□ -1.56
SUP4	tY(GUA)J2	SSH1	P38353	490 aa	Known RBP	5.3	□□□□□ -1.56
SUP4	tY(GUA)J2	ARO9	P38840	513 aa	Predicted RBP	5.3	□□□□□ -1.56
SUP4	tY(GUA)J2	DLS1	P40366	167 aa		5.3	□□□□□ -1.56
SUP4	tY(GUA)J2	YIL152W	P40455	235 aa		5.3	□□□□□ -1.56
SUP4	tY(GUA)J2	AVT7	P40501	490 aa		5.3	□□□□□ -1.56
SUP4	tY(GUA)J2	CIN2	P46670	268 aa		5.3	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 50.2 ms