RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W YDR102CQ03864 110 aa12.84□□□□□ -0.35
SHR5YOL110W RVB1Q03940 463 aaKnown RBP12.84□□□□□ -0.35
SHR5YOL110W YDL218WQ07629 317 aa12.84□□□□□ -0.35
SHR5YOL110W YPL272CQ08984 517 aa12.84□□□□□ -0.35
SHR5YOL110W DCP1Q12517 231 aaPredicted RBP12.84□□□□□ -0.35
SHR5YOL110W SOF1P33750 489 aaKnown RBP12.83□□□□□ -0.36
SHR5YOL110W RPN14P53196 417 aa12.83□□□□□ -0.36
SHR5YOL110W YMR252CQ04814 134 aa12.83□□□□□ -0.36
SHR5YOL110W NNT1Q05874 261 aa12.83□□□□□ -0.36
SHR5YOL110W GAS2Q06135 555 aa12.83□□□□□ -0.36
SHR5YOL110W GPN3Q06543 272 aa12.83□□□□□ -0.36
SHR5YOL110W MSH5Q12175 901 aa12.83□□□□□ -0.36
SHR5YOL110W YLR099W-AQ3E798 87 aa12.83□□□□□ -0.36
SHR5YOL110W MRP1P10662 321 aaKnown RBP12.82□□□□□ -0.36
SHR5YOL110W DOA4P32571 926 aa12.82□□□□□ -0.36
SHR5YOL110W CHS7P38843 316 aa12.82□□□□□ -0.36
SHR5YOL110W RTT105P40063 208 aa12.82□□□□□ -0.36
SHR5YOL110W PAM16P42949 149 aa12.82□□□□□ -0.36
SHR5YOL110W CCC1P47818 322 aa12.82□□□□□ -0.36
SHR5YOL110W CIK1Q01649 594 aa12.82□□□□□ -0.36
SHR5YOL110W SOG2Q08817 791 aa12.82□□□□□ -0.36
SHR5YOL110W MED2Q12124 431 aa12.82□□□□□ -0.36
SHR5YOL110W IPP1P00817 287 aaKnown RBP12.81□□□□□ -0.36
SHR5YOL110W PDE2P06776 526 aa12.81□□□□□ -0.36
SHR5YOL110W COX9P07255 59 aa12.81□□□□□ -0.36
SHR5YOL110W PTC6P25646 442 aa12.81□□□□□ -0.36
SHR5YOL110W MTH1P35198 433 aa12.81□□□□□ -0.36
SHR5YOL110W SPT10P35208 640 aa12.81□□□□□ -0.36
SHR5YOL110W ADO1P47143 340 aaKnown RBP12.81□□□□□ -0.36
SHR5YOL110W SOK2P53438 785 aaPredicted RBP12.81□□□□□ -0.36
SHR5YOL110W ASI3P53983 676 aa12.81□□□□□ -0.36
SHR5YOL110W PET191Q02772 108 aa12.81□□□□□ -0.36
SHR5YOL110W HLR1Q04429 423 aa12.81□□□□□ -0.36
SHR5YOL110W TSR2Q06672 205 aaKnown RBP12.81□□□□□ -0.36
SHR5YOL110W LUC7Q07508 261 aaPredicted RBP12.81□□□□□ -0.36
SHR5YOL110W BRE4Q07660 1125 aa12.81□□□□□ -0.36
SHR5YOL110W SUS1Q6WNK7 96 aa12.81□□□□□ -0.36
SHR5YOL110W SHE2P36068 246 aaKnown RBP RIP-Chip data12.8□□□□□ -0.36not detected
SHR5YOL110W ANR2P36090 516 aaPredicted RBP12.8□□□□□ -0.36
SHR5YOL110W MRPL39P36533 70 aa12.8□□□□□ -0.36
SHR5YOL110W PEX32P38292 413 aa12.8□□□□□ -0.36
SHR5YOL110W SLZ1P40167 298 aa12.8□□□□□ -0.36
SHR5YOL110W DPB11P47027 764 aaPredicted RBP12.8□□□□□ -0.36
SHR5YOL110W PMT5P52867 743 aa12.8□□□□□ -0.36
SHR5YOL110W TDA1Q03533 586 aa12.8□□□□□ -0.36
SHR5YOL110W YLR352WQ06479 807 aa12.8□□□□□ -0.36
SHR5YOL110W MCH4Q08268 501 aa12.8□□□□□ -0.36
SHR5YOL110W RTC5Q12108 567 aaKnown RBP12.8□□□□□ -0.36
SHR5YOL110W TY1A-BLQ12266 440 aa12.8□□□□□ -0.36
SHR5YOL110W BLM10P43583 2143 aa12.8□□□□□ -0.36
SHR5YOL110W PHO2P07269 559 aa12.79□□□□□ -0.36
SHR5YOL110W MEK1P24719 497 aaPredicted RBP12.79□□□□□ -0.36
SHR5YOL110W AIM3P38266 947 aaKnown RBP12.79□□□□□ -0.36
SHR5YOL110W RMD9P53140 646 aaKnown RBP12.79□□□□□ -0.36
SHR5YOL110W IMO32P53219 342 aa12.79□□□□□ -0.36
SHR5YOL110W SSY1Q03770 852 aa12.79□□□□□ -0.36
SHR5YOL110W AIM36Q03798 255 aa12.79□□□□□ -0.36
SHR5YOL110W COQ11Q05892 277 aa12.79□□□□□ -0.36
SHR5YOL110W YDL180WQ12301 547 aa12.79□□□□□ -0.36
SHR5YOL110W NOP56Q12460 504 aaKnown RBP RIP-Chip data12.79□□□□□ -0.36not detected
SHR5YOL110W RRI1Q12468 440 aa12.79□□□□□ -0.36
SHR5YOL110W RPN13O13563 156 aa12.78□□□□□ -0.36
SHR5YOL110W QCR7P00128 127 aa12.78□□□□□ -0.36
SHR5YOL110W ATG18P43601 500 aa12.78□□□□□ -0.36
SHR5YOL110W HSV2P50079 448 aaPredicted RBP12.78□□□□□ -0.36
SHR5YOL110W YNR040WP53736 256 aa12.78□□□□□ -0.36
SHR5YOL110W YMR265CQ03508 461 aaKnown RBP12.78□□□□□ -0.36
SHR5YOL110W NGL1Q08213 363 aaKnown RBP12.78□□□□□ -0.36
SHR5YOL110W YBR056W-AI2HB52 66 aa12.77□□□□□ -0.37
SHR5YOL110W CUP1-1P0CX80 61 aa12.77□□□□□ -0.37
SHR5YOL110W CUP1-2P0CX81 61 aa12.77□□□□□ -0.37
SHR5YOL110W DBF2P22204 572 aa12.77□□□□□ -0.37
SHR5YOL110W PAU2P32612 120 aa12.77□□□□□ -0.37
SHR5YOL110W YBR137WP38276 179 aa12.77□□□□□ -0.37
SHR5YOL110W GPI17Q04080 534 aa12.77□□□□□ -0.37
SHR5YOL110W PEX27Q08580 376 aa12.77□□□□□ -0.37
SHR5YOL110W YBL113CQ7M4S9 792 aa12.77□□□□□ -0.37
SHR5YOL110W SCEIP03882 235 aa12.76□□□□□ -0.37
SHR5YOL110W TIR3P40552 269 aa12.76□□□□□ -0.37
SHR5YOL110W SLS1P42900 643 aa12.76□□□□□ -0.37
SHR5YOL110W MRPL19P53875 158 aa12.76□□□□□ -0.37
SHR5YOL110W MRP51Q02950 344 aa12.76□□□□□ -0.37
SHR5YOL110W PLB2Q03674 706 aa12.76□□□□□ -0.37
SHR5YOL110W TIR4Q12218 487 aaPredicted RBP12.76□□□□□ -0.37
SHR5YOL110W GCN4P03069 281 aa12.75□□□□□ -0.37
SHR5YOL110W PRB1P09232 635 aa12.75□□□□□ -0.37
SHR5YOL110W ZUO1P32527 433 aaKnown RBP12.75□□□□□ -0.37
SHR5YOL110W CCZ1P38273 704 aa12.75□□□□□ -0.37
SHR5YOL110W CWC23P52868 283 aaPredicted RBP12.75□□□□□ -0.37
SHR5YOL110W RAI1P53063 387 aaKnown RBP12.75□□□□□ -0.37
SHR5YOL110W YGL204CP53089 101 aa12.75□□□□□ -0.37
SHR5YOL110W PCP1P53259 346 aa12.75□□□□□ -0.37
SHR5YOL110W SAM50P53969 484 aa12.75□□□□□ -0.37
SHR5YOL110W ZRT3P34240 503 aa12.74□□□□□ -0.37
SHR5YOL110W TMA19P35691 167 aaKnown RBP12.74□□□□□ -0.37
SHR5YOL110W FCY21P40039 528 aa12.74□□□□□ -0.37
SHR5YOL110W XBP1P40489 647 aa12.74□□□□□ -0.37
SHR5YOL110W AAD14P42884 376 aa12.74□□□□□ -0.37
SHR5YOL110W YJR120WP47157 116 aa12.74□□□□□ -0.37
SHR5YOL110W MTM1P53320 366 aa12.74□□□□□ -0.37
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms