RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF120YNL278W YJL118WP47022 219 aa2.53□□□□□ -2.01
CAF120YNL278W AVT1P47082 602 aa2.53□□□□□ -2.01
CAF120YNL278W SOK2P53438 785 aaPredicted RBP2.53□□□□□ -2.01
CAF120YNL278W IDP3P53982 420 aaKnown RBP2.53□□□□□ -2.01
CAF120YNL278W EKI1Q03764 534 aa2.53□□□□□ -2.01
CAF120YNL278W RRG8Q06109 277 aa2.53□□□□□ -2.01
CAF120YNL278W RRP40Q08285 240 aaKnown RBP2.53□□□□□ -2.01
CAF120YNL278W YOR365CQ08844 703 aa2.53□□□□□ -2.01
CAF120YNL278W YDL211CQ12121 372 aa2.53□□□□□ -2.01
CAF120YNL278W YPR063CQ12160 140 aa2.53□□□□□ -2.01
CAF120YNL278W TRP4P07285 380 aaPredicted RBP2.52□□□□□ -2.01
CAF120YNL278W YOL163WP0CF20 169 aa2.52□□□□□ -2.01
CAF120YNL278W RPL24BP24000 155 aaKnown RBP2.52□□□□□ -2.01
CAF120YNL278W IFM1P25038 676 aa2.52□□□□□ -2.01
CAF120YNL278W CNB1P25296 175 aa2.52□□□□□ -2.01
CAF120YNL278W ELO2P25358 347 aa2.52□□□□□ -2.01
CAF120YNL278W ADH7P25377 361 aa2.52□□□□□ -2.01
CAF120YNL278W YMC1P32331 307 aa2.52□□□□□ -2.01
CAF120YNL278W SGE1P33335 543 aa2.52□□□□□ -2.01
CAF120YNL278W AUR1P36107 401 aaPredicted RBP2.52□□□□□ -2.01
CAF120YNL278W AHP1P38013 176 aaKnown RBP2.52□□□□□ -2.01
CAF120YNL278W SHU2P38957 223 aa2.52□□□□□ -2.01
CAF120YNL278W YJL206CP39529 758 aa2.52□□□□□ -2.01
CAF120YNL278W XBP1P40489 647 aa2.52□□□□□ -2.01
CAF120YNL278W CDC40P40968 455 aaPredicted RBP2.52□□□□□ -2.01
CAF120YNL278W FMP32P43557 207 aa2.52□□□□□ -2.01
CAF120YNL278W LSM8P47093 109 aaKnown RBP2.52□□□□□ -2.01
CAF120YNL278W YGR045CP53229 120 aa2.52□□□□□ -2.01
CAF120YNL278W GPI1P53306 609 aa2.52□□□□□ -2.01
CAF120YNL278W CAF40P53829 373 aa2.52□□□□□ -2.01
CAF120YNL278W AAT1Q01802 451 aa2.52□□□□□ -2.01
CAF120YNL278W TIM44Q01852 431 aa2.52□□□□□ -2.01
CAF120YNL278W CRR1Q05790 422 aa2.52□□□□□ -2.01
CAF120YNL278W NEJ1Q06148 342 aa2.52□□□□□ -2.01
CAF120YNL278W PLB3Q08108 686 aa2.52□□□□□ -2.01
CAF120YNL278W ALG6Q12001 544 aaKnown RBP2.52□□□□□ -2.01
CAF120YNL278W PFA4Q12006 378 aa2.52□□□□□ -2.01
CAF120YNL278W RGT2Q12300 763 aa2.52□□□□□ -2.01
CAF120YNL278W Q0010Q9ZZX9 128 aa2.52□□□□□ -2.01
CAF120YNL278W YPT1P01123 206 aaKnown RBP2.52□□□□□ -2.01
CAF120YNL278W ADE5,7P07244 802 aaKnown RBP2.52□□□□□ -2.01
CAF120YNL278W MET2P08465 486 aa2.52□□□□□ -2.01
CAF120YNL278W ZWF1P11412 505 aaKnown RBP2.52□□□□□ -2.01
CAF120YNL278W SCH9P11792 824 aaKnown RBP2.52□□□□□ -2.01
CAF120YNL278W MET16P18408 261 aaPredicted RBP2.52□□□□□ -2.01
CAF120YNL278W STE18P18852 110 aa2.52□□□□□ -2.01
CAF120YNL278W PRE2P30656 287 aaKnown RBP2.52□□□□□ -2.01
CAF120YNL278W RML2P32611 393 aa2.52□□□□□ -2.01
CAF120YNL278W COX13P32799 129 aa2.52□□□□□ -2.01
CAF120YNL278W IMD2P38697 523 aaKnown RBP2.52□□□□□ -2.01
CAF120YNL278W PTC7P38797 343 aa2.52□□□□□ -2.01
CAF120YNL278W NPT1P39683 429 aaKnown RBP2.52□□□□□ -2.01
CAF120YNL278W YFR020WP43600 232 aa2.52□□□□□ -2.01
CAF120YNL278W MUP1P50276 574 aa2.52□□□□□ -2.01
CAF120YNL278W NQM1P53228 333 aaPredicted RBP2.52□□□□□ -2.01
CAF120YNL278W MTM1P53320 366 aa2.52□□□□□ -2.01
CAF120YNL278W MTQ1P53944 314 aa2.52□□□□□ -2.01
CAF120YNL278W TMN2Q04562 672 aa2.52□□□□□ -2.01
CAF120YNL278W MRPL51Q06090 140 aaPredicted RBP2.52□□□□□ -2.01
CAF120YNL278W IRC13Q08630 104 aa2.52□□□□□ -2.01
CAF120YNL278W YPR202WQ08993 238 aa2.52□□□□□ -2.01
CAF120YNL278W YOR029WQ12243 111 aa2.52□□□□□ -2.01
CAF120YNL278W PAA1Q12447 191 aaKnown RBP2.52□□□□□ -2.01
CAF120YNL278W MHT1Q12525 324 aa2.52□□□□□ -2.01
CAF120YNL278W YKL033W-AQ86ZR7 236 aa2.52□□□□□ -2.01
CAF120YNL278W YHR213W-AQ8TGT4 77 aa2.52□□□□□ -2.01
CAF120YNL278W COX3P00420 269 aa2.51□□□□□ -2.01
CAF120YNL278W RPP1AP05318 106 aaPredicted RBP2.51□□□□□ -2.01
CAF120YNL278W ERS1P17261 260 aa2.51□□□□□ -2.01
CAF120YNL278W BUB2P26448 306 aaPredicted RBP2.51□□□□□ -2.01
CAF120YNL278W RPS5P26783 225 aaKnown RBP2.51□□□□□ -2.01
CAF120YNL278W NTH1P32356 751 aa2.51□□□□□ -2.01
CAF120YNL278W ARA1P38115 344 aa2.51□□□□□ -2.01
CAF120YNL278W SLM4P38247 162 aa2.51□□□□□ -2.01
CAF120YNL278W PHO89P38361 574 aa2.51□□□□□ -2.01
CAF120YNL278W YNL195CP40168 261 aa2.51□□□□□ -2.01
CAF120YNL278W RIB4P50861 169 aaPredicted RBP2.51□□□□□ -2.01
CAF120YNL278W UFD1P53044 361 aa2.51□□□□□ -2.01
CAF120YNL278W COS12P53053 380 aa2.51□□□□□ -2.01
CAF120YNL278W BIO4P53630 237 aa2.51□□□□□ -2.01
CAF120YNL278W ARL3Q02804 198 aa2.51□□□□□ -2.01
CAF120YNL278W TRS31Q03337 283 aa2.51□□□□□ -2.01
CAF120YNL278W YDR476CQ03362 224 aa2.51□□□□□ -2.01
CAF120YNL278W SWC7Q06707 132 aa2.51□□□□□ -2.01
CAF120YNL278W YFH1Q07540 174 aa2.51□□□□□ -2.01
CAF120YNL278W RRG7Q08774 242 aaPredicted RBP2.51□□□□□ -2.01
CAF120YNL278W YPL199CQ08954 240 aa2.51□□□□□ -2.01
CAF120YNL278W APC9Q12107 265 aa2.51□□□□□ -2.01
CAF120YNL278W UPC2Q12151 913 aa2.51□□□□□ -2.01
CAF120YNL278W DCN1Q12395 269 aa2.51□□□□□ -2.01
CAF120YNL278W YLR302CO13544 120 aa2.51□□□□□ -2.01
CAF120YNL278W HTB1P02293 131 aaKnown RBP2.51□□□□□ -2.01
CAF120YNL278W HTB2P02294 131 aa2.51□□□□□ -2.01
CAF120YNL278W SAG1P20840 650 aa2.51□□□□□ -2.01
CAF120YNL278W SRB5P32585 307 aa2.51□□□□□ -2.01
CAF120YNL278W SOF1P33750 489 aaKnown RBP2.51□□□□□ -2.01
CAF120YNL278W SKT5P34226 696 aa2.51□□□□□ -2.01
CAF120YNL278W RIB5P38145 238 aa2.51□□□□□ -2.01
CAF120YNL278W PFS1P38872 237 aa2.51□□□□□ -2.01
CAF120YNL278W PDS1P40316 373 aaPredicted RBP2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms