RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EAR1	YMR171C	COS1	P53822	381 aa		4.19	□□□□□ -1.74
EAR1	YMR171C	DML1	Q03652	475 aa		4.19	□□□□□ -1.74
EAR1	YMR171C	RNH202	Q05635	350 aa		4.19	□□□□□ -1.74
EAR1	YMR171C	PDR8	Q06149	701 aa		4.19	□□□□□ -1.74
EAR1	YMR171C	FEX2	Q08991	375 aa		4.19	□□□□□ -1.74
EAR1	YMR171C	PFA4	Q12006	378 aa		4.19	□□□□□ -1.74
EAR1	YMR171C	YBR126W-A	Q8TGU7	68 aa		4.19	□□□□□ -1.74
EAR1	YMR171C	YER145C-A	A0A023PYF4	145 aa		4.18	□□□□□ -1.74
EAR1	YMR171C	GCN4	P03069	281 aa		4.18	□□□□□ -1.74
EAR1	YMR171C	STE7	P06784	515 aa		4.18	□□□□□ -1.74
EAR1	YMR171C	CHO1	P08456	276 aa		4.18	□□□□□ -1.74
EAR1	YMR171C	DSF1	P0CX08	502 aa		4.18	□□□□□ -1.74
EAR1	YMR171C	YNR073C	P0CX09	502 aa		4.18	□□□□□ -1.74
EAR1	YMR171C	YCR006C	P25350	157 aa		4.18	□□□□□ -1.74
EAR1	YMR171C	SHE1	P38200	338 aa		4.18	□□□□□ -1.74
EAR1	YMR171C	GGC1	P38988	300 aa		4.18	□□□□□ -1.74
EAR1	YMR171C	HEM14	P40012	539 aa		4.18	□□□□□ -1.74
EAR1	YMR171C	APQ12	P40532	138 aa		4.18	□□□□□ -1.74
EAR1	YMR171C	SNO3	P43544	222 aa		4.18	□□□□□ -1.74
EAR1	YMR171C	ALB1	P47019	175 aa	Predicted RBP	4.18	□□□□□ -1.74
EAR1	YMR171C	NUP57	P48837	541 aa		4.18	□□□□□ -1.74
EAR1	YMR171C	PYK2	P52489	506 aa	Known RBP	4.18	□□□□□ -1.74
EAR1	YMR171C	ELP6	Q04868	273 aa		4.18	□□□□□ -1.74
EAR1	YMR171C	FRE3	Q08905	711 aa		4.18	□□□□□ -1.74
EAR1	YMR171C	RRP12	Q12754	1228 aa	Known RBP	4.18	□□□□□ -1.74
EAR1	YMR171C	HIS3	P06633	220 aa		4.17	□□□□□ -1.74
EAR1	YMR171C	CAR2	P07991	424 aa	Known RBP	4.17	□□□□□ -1.74
EAR1	YMR171C	YOL163W	P0CF20	169 aa		4.17	□□□□□ -1.74
EAR1	YMR171C	PRE7	P23724	241 aa	Known RBP	4.17	□□□□□ -1.74
EAR1	YMR171C	COQ3	P27680	312 aa		4.17	□□□□□ -1.74
EAR1	YMR171C	ITR1	P30605	584 aa		4.17	□□□□□ -1.74
EAR1	YMR171C	SKN1	P33336	771 aa		4.17	□□□□□ -1.74
EAR1	YMR171C	ASC1	P38011	319 aa	Known RBP	4.17	□□□□□ -1.74
EAR1	YMR171C	MNN2	P38069	597 aa		4.17	□□□□□ -1.74
EAR1	YMR171C	LEU5	P38702	357 aa		4.17	□□□□□ -1.74
EAR1	YMR171C	RRF1	P38771	230 aa		4.17	□□□□□ -1.74
EAR1	YMR171C	PTI1	P39927	425 aa	Predicted RBP	4.17	□□□□□ -1.74
EAR1	YMR171C	RPE1	P46969	238 aa		4.17	□□□□□ -1.74
EAR1	YMR171C	BAT2	P47176	376 aa	Known RBP	4.17	□□□□□ -1.74
EAR1	YMR171C	UBC12	P52491	188 aa		4.17	□□□□□ -1.74
EAR1	YMR171C	COG7	P53195	279 aa		4.17	□□□□□ -1.74
EAR1	YMR171C	HXT11	P54862	567 aa		4.17	□□□□□ -1.74
EAR1	YMR171C	PRM15	Q03262	622 aa		4.17	□□□□□ -1.74
EAR1	YMR171C	MFB1	Q04922	465 aa		4.17	□□□□□ -1.74
EAR1	YMR171C	BOP2	Q06150	570 aa		4.17	□□□□□ -1.74
EAR1	YMR171C	ARV1	Q06541	321 aa		4.17	□□□□□ -1.74
EAR1	YMR171C	YLR031W	Q07978	186 aa		4.17	□□□□□ -1.74
EAR1	YMR171C	MCH4	Q08268	501 aa		4.17	□□□□□ -1.74
EAR1	YMR171C	SYC1	Q08553	188 aa	Predicted RBP	4.17	□□□□□ -1.74
EAR1	YMR171C	PER33	Q12144	273 aa		4.17	□□□□□ -1.74
EAR1	YMR171C	YLR099W-A	Q3E798	87 aa		4.17	□□□□□ -1.74
EAR1	YMR171C	QCR7	P00128	127 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	GAL4	P04386	881 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	EXG1	P23776	448 aa	Known RBP	4.16	□□□□□ -1.74
EAR1	YMR171C	YCR102C	P25608	368 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	MGM101	P32787	269 aa	Known RBP	4.16	□□□□□ -1.74
EAR1	YMR171C	MSN2	P33748	704 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	TUL1	P36096	758 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	AIM2	P39721	246 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	DPB11	P47027	764 aa	Predicted RBP	4.16	□□□□□ -1.74
EAR1	YMR171C	JAC1	P53193	184 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	VOA1	P53262	265 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	PNG1	Q02890	363 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	MSS11	Q03825	758 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	RRN11	Q04712	507 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	REX4	Q08237	289 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	BSC1	Q12140	328 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	TPO4	Q12256	659 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	YDL007C-A	Q2V2Q0	85 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	TAO3	P40468	2376 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	RPS18A	P0CX55	146 aa	Known RBP	4.16	□□□□□ -1.74
EAR1	YMR171C	RPS18B	P0CX56	146 aa	Predicted RBP	4.16	□□□□□ -1.74
EAR1	YMR171C	ERD2	P18414	219 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	PHO80	P20052	293 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	OLE1	P21147	510 aa	Known RBP	4.16	□□□□□ -1.74
EAR1	YMR171C	CAM1	P29547	415 aa	Known RBP	4.16	□□□□□ -1.74
EAR1	YMR171C	KKQ8	P36004	724 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	AUR1	P36107	401 aa	Predicted RBP	4.16	□□□□□ -1.74
EAR1	YMR171C	RRN10	P38204	145 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	RRP4	P38792	359 aa	Known RBP	4.16	□□□□□ -1.74
EAR1	YMR171C	CHL4	P38907	458 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	YMR144W	P40214	342 aa	Known RBP	4.16	□□□□□ -1.74
EAR1	YMR171C	RFC4	P40339	323 aa	Known RBP	4.16	□□□□□ -1.74
EAR1	YMR171C	PKP1	P40530	394 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	TIR3	P40552	269 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	AZF1	P41696	914 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	PRM10	P42946	383 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	BNA6	P43619	295 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	AIM25	P47140	327 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	RAD17	P48581	401 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	FLC3	P53121	802 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	POP6	P53218	158 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	SYF2	P53277	215 aa	Predicted RBP	4.16	□□□□□ -1.74
EAR1	YMR171C	MTQ1	P53944	314 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	SCS7	Q03529	384 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	OST6	Q03723	332 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	SPC19	Q03954	165 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	YMR315W	Q04869	349 aa	Known RBP	4.16	□□□□□ -1.74
EAR1	YMR171C	PLB3	Q08108	686 aa		4.16	□□□□□ -1.74
EAR1	YMR171C	SKI7	Q08491	747 aa	Predicted RBP	4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 165.1 ms