RNA–Protein interactions for RNA: YMR106C

YKU80, Transcript of Subunit of the telomeric Ku complex (Yku70p-Yku80p), yeastyeast

Gene YKU80, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKU80YMR106C QDR3P38227 689 aa2.28□□□□□ -2.04
YKU80YMR106C TRM7P38238 310 aaKnown RBP2.28□□□□□ -2.04
YKU80YMR106C IPI1P38803 334 aaPredicted RBP2.28□□□□□ -2.04
YKU80YMR106C ARO9P38840 513 aaPredicted RBP2.28□□□□□ -2.04
YKU80YMR106C EXO1P39875 702 aa2.28□□□□□ -2.04
YKU80YMR106C ARG2P40360 574 aa2.28□□□□□ -2.04
YKU80YMR106C YCH1P42937 148 aa2.28□□□□□ -2.04
YKU80YMR106C GAT1P43574 510 aa2.28□□□□□ -2.04
YKU80YMR106C CTK3P46963 296 aaPredicted RBP2.28□□□□□ -2.04
YKU80YMR106C TPN1P53099 579 aa2.28□□□□□ -2.04
YKU80YMR106C MMS2P53152 137 aa2.28□□□□□ -2.04
YKU80YMR106C PEX31P53203 462 aa2.28□□□□□ -2.04
YKU80YMR106C MPA43P53583 542 aaPredicted RBP2.28□□□□□ -2.04
YKU80YMR106C CAF40P53829 373 aa2.28□□□□□ -2.04
YKU80YMR106C APS2Q00381 147 aa2.28□□□□□ -2.04
YKU80YMR106C PFA5Q03289 374 aa2.28□□□□□ -2.04
YKU80YMR106C YMR027WQ04371 470 aa2.28□□□□□ -2.04
YKU80YMR106C GMC1Q04399 608 aa2.28□□□□□ -2.04
YKU80YMR106C YDR124WQ04608 324 aa2.28□□□□□ -2.04
YKU80YMR106C YMR253CQ04835 414 aa2.28□□□□□ -2.04
YKU80YMR106C COA4Q05809 96 aa2.28□□□□□ -2.04
YKU80YMR106C GAS2Q06135 555 aa2.28□□□□□ -2.04
YKU80YMR106C UIP4Q08926 304 aa2.28□□□□□ -2.04
YKU80YMR106C PST2Q12335 198 aaKnown RBP2.28□□□□□ -2.04
YKU80YMR106C BUD4P47136 1447 aa2.28□□□□□ -2.04
YKU80YMR106C CYC3P06182 269 aa2.28□□□□□ -2.04
YKU80YMR106C HAP2P06774 265 aa2.28□□□□□ -2.04
YKU80YMR106C RPL31BP0C2H9 113 aaKnown RBP2.28□□□□□ -2.04
YKU80YMR106C YML003WP0CF16 290 aa2.28□□□□□ -2.04
YKU80YMR106C IMA3P0CW40 589 aa2.28□□□□□ -2.04
YKU80YMR106C IMA4P0CW41 589 aa2.28□□□□□ -2.04
YKU80YMR106C CDC43P18898 376 aa2.28□□□□□ -2.04
YKU80YMR106C SAM2P19358 384 aaKnown RBP2.28□□□□□ -2.04
YKU80YMR106C SEC59P20048 519 aa2.28□□□□□ -2.04
YKU80YMR106C LRE1P25579 583 aaKnown RBP2.28□□□□□ -2.04
YKU80YMR106C YCR102CP25608 368 aa2.28□□□□□ -2.04
YKU80YMR106C NUP2P32499 720 aa2.28□□□□□ -2.04
YKU80YMR106C YEF1P32622 495 aa2.28□□□□□ -2.04
YKU80YMR106C NRP1P32770 719 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
YKU80YMR106C SIP2P34164 415 aaKnown RBP2.28□□□□□ -2.04
YKU80YMR106C YKR041WP36134 250 aa2.28□□□□□ -2.04
YKU80YMR106C YBR062CP38239 180 aa2.28□□□□□ -2.04
YKU80YMR106C YBR137WP38276 179 aa2.28□□□□□ -2.04
YKU80YMR106C MTC4P38335 694 aaKnown RBP2.28□□□□□ -2.04
YKU80YMR106C LEU5P38702 357 aa2.28□□□□□ -2.04
YKU80YMR106C PCL5P38794 229 aa2.28□□□□□ -2.04
YKU80YMR106C YHR127WP38833 243 aaKnown RBP2.28□□□□□ -2.04
YKU80YMR106C VMA7P39111 118 aa2.28□□□□□ -2.04
YKU80YMR106C PRE6P40303 254 aaKnown RBP2.28□□□□□ -2.04
YKU80YMR106C LYS12P40495 371 aaKnown RBP2.28□□□□□ -2.04
YKU80YMR106C PAC11P40960 533 aa2.28□□□□□ -2.04
YKU80YMR106C YJL016WP47072 561 aa2.28□□□□□ -2.04
YKU80YMR106C RPS12P48589 143 aaKnown RBP2.28□□□□□ -2.04
YKU80YMR106C MIC26P50087 233 aa2.28□□□□□ -2.04
YKU80YMR106C VEL1P53058 206 aa2.28□□□□□ -2.04
YKU80YMR106C FHN1P53279 174 aa2.28□□□□□ -2.04
YKU80YMR106C YGR168CP53293 376 aa2.28□□□□□ -2.04
YKU80YMR106C RSM27P53305 110 aa2.28□□□□□ -2.04
YKU80YMR106C MSO1P53604 210 aaKnown RBP2.28□□□□□ -2.04
YKU80YMR106C YNL040WP53960 456 aaPredicted RBP2.28□□□□□ -2.04
YKU80YMR106C YPL077CQ02831 240 aa2.28□□□□□ -2.04
YKU80YMR106C YPL113CQ02961 396 aa2.28□□□□□ -2.04
YKU80YMR106C YDR249CQ03787 373 aa2.28□□□□□ -2.04
YKU80YMR106C YML096WQ04489 525 aa2.28□□□□□ -2.04
YKU80YMR106C TMN2Q04562 672 aa2.28□□□□□ -2.04
YKU80YMR106C BNA5Q05979 453 aa2.28□□□□□ -2.04
YKU80YMR106C ATG39Q06159 398 aa2.28□□□□□ -2.04
YKU80YMR106C NKP2Q06162 153 aa2.28□□□□□ -2.04
YKU80YMR106C IMA2Q08295 589 aa2.28□□□□□ -2.04
YKU80YMR106C YOR387CQ08910 206 aa2.28□□□□□ -2.04
YKU80YMR106C YPL257WQ08974 193 aa2.28□□□□□ -2.04
YKU80YMR106C YOR283WQ12040 230 aaKnown RBP2.28□□□□□ -2.04
YKU80YMR106C IZH4Q99393 312 aa2.28□□□□□ -2.04
YKU80YMR106C PSK1P31374 1356 aa2.28□□□□□ -2.05
YKU80YMR106C MHP1P43638 1398 aa2.28□□□□□ -2.05
YKU80YMR106C SMC4Q12267 1418 aa2.28□□□□□ -2.05
YKU80YMR106C TPI1P00942 248 aaKnown RBP2.27□□□□□ -2.05
YKU80YMR106C RPL28P02406 149 aaKnown RBP2.27□□□□□ -2.05
YKU80YMR106C ADE4P04046 510 aaKnown RBP2.27□□□□□ -2.05
YKU80YMR106C EXO70P19658 623 aa2.27□□□□□ -2.05
YKU80YMR106C PHO80P20052 293 aa2.27□□□□□ -2.05
YKU80YMR106C EPT1P22140 391 aa2.27□□□□□ -2.05
YKU80YMR106C MIR1P23641 311 aaKnown RBP2.27□□□□□ -2.05
YKU80YMR106C YCR023CP25351 611 aa2.27□□□□□ -2.05
YKU80YMR106C ILV6P25605 309 aaKnown RBP2.27□□□□□ -2.05
YKU80YMR106C HOM6P31116 359 aaKnown RBP2.27□□□□□ -2.05
YKU80YMR106C PMT2P31382 759 aa2.27□□□□□ -2.05
YKU80YMR106C MSK1P32048 576 aa2.27□□□□□ -2.05
YKU80YMR106C RNP1P32385 249 aa2.27□□□□□ -2.05
YKU80YMR106C JEN1P36035 616 aa2.27□□□□□ -2.05
YKU80YMR106C GMH1P36125 273 aa2.27□□□□□ -2.05
YKU80YMR106C SKG1P36169 355 aa2.27□□□□□ -2.05
YKU80YMR106C ROT2P38138 954 aa2.27□□□□□ -2.05
YKU80YMR106C ARP1P38696 384 aa2.27□□□□□ -2.05
YKU80YMR106C SHO1P40073 367 aa2.27□□□□□ -2.05
YKU80YMR106C ERJ5P43613 295 aaPredicted RBP2.27□□□□□ -2.05
YKU80YMR106C IKS1P47042 667 aa2.27□□□□□ -2.05
YKU80YMR106C IRC18P47056 224 aa2.27□□□□□ -2.05
YKU80YMR106C BRR6P53062 197 aa2.27□□□□□ -2.05
YKU80YMR106C COG7P53195 279 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms