RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C SCW4P53334 386 aaKnown RBP1.94□□□□□ -2.1
UFD4YKL010C ODC1Q03028 310 aa1.94□□□□□ -2.1
UFD4YKL010C ATG10Q07879 167 aa1.94□□□□□ -2.1
UFD4YKL010C YLR030WQ07967 263 aa1.94□□□□□ -2.1
UFD4YKL010C TIM9O74700 87 aa1.94□□□□□ -2.1
UFD4YKL010C IPP1P00817 287 aaKnown RBP1.94□□□□□ -2.1
UFD4YKL010C GPX1P36014 167 aa1.94□□□□□ -2.1
UFD4YKL010C ECM31P38122 312 aa1.94□□□□□ -2.1
UFD4YKL010C MIT1P40002 666 aa1.94□□□□□ -2.1
UFD4YKL010C RTT105P40063 208 aa1.94□□□□□ -2.1
UFD4YKL010C NEO1P40527 1151 aa1.94□□□□□ -2.1
UFD4YKL010C BAP3P41815 604 aa1.94□□□□□ -2.1
UFD4YKL010C LOH1P47055 219 aa1.94□□□□□ -2.1
UFD4YKL010C ECM27P47144 725 aa1.94□□□□□ -2.1
UFD4YKL010C VOA1P53262 265 aa1.94□□□□□ -2.1
UFD4YKL010C DBP6P53734 629 aaKnown RBP1.94□□□□□ -2.1
UFD4YKL010C CWC24P53769 259 aa1.94□□□□□ -2.1
UFD4YKL010C SNP1Q00916 300 aaPredicted RBP1.94□□□□□ -2.1
UFD4YKL010C ARX1Q03862 593 aaKnown RBP1.94□□□□□ -2.1
UFD4YKL010C NAT4Q04751 285 aa1.94□□□□□ -2.1
UFD4YKL010C VID22Q05934 901 aa1.94□□□□□ -2.1
UFD4YKL010C ANT1Q06497 328 aa1.94□□□□□ -2.1
UFD4YKL010C SWA2Q06677 668 aa1.94□□□□□ -2.1
UFD4YKL010C SYC1Q08553 188 aaPredicted RBP1.94□□□□□ -2.1
UFD4YKL010C GUP2Q08929 609 aa1.94□□□□□ -2.1
UFD4YKL010C DAP1Q12091 152 aa1.94□□□□□ -2.1
UFD4YKL010C PRB1P09232 635 aa1.93□□□□□ -2.1
UFD4YKL010C GRX2P17695 143 aaKnown RBP1.93□□□□□ -2.1
UFD4YKL010C PPH21P23594 369 aa1.93□□□□□ -2.1
UFD4YKL010C NFS1P25374 497 aa1.93□□□□□ -2.1
UFD4YKL010C MDL1P33310 695 aa1.93□□□□□ -2.1
UFD4YKL010C LEU5P38702 357 aa1.93□□□□□ -2.1
UFD4YKL010C YHR035WP38769 630 aa1.93□□□□□ -2.1
UFD4YKL010C YMR144WP40214 342 aaKnown RBP1.93□□□□□ -2.1
UFD4YKL010C YIL060WP40519 144 aa1.93□□□□□ -2.1
UFD4YKL010C DOC1P53068 250 aa1.93□□□□□ -2.1
UFD4YKL010C HOL1P53389 586 aa1.93□□□□□ -2.1
UFD4YKL010C MRPL50P53724 139 aa1.93□□□□□ -2.1
UFD4YKL010C COS1P53822 381 aa1.93□□□□□ -2.1
UFD4YKL010C MRPL22P53881 309 aa1.93□□□□□ -2.1
UFD4YKL010C FIN1Q03898 291 aa1.93□□□□□ -2.1
UFD4YKL010C SNX41Q04053 625 aa1.93□□□□□ -2.1
UFD4YKL010C SNO4Q04902 237 aa1.93□□□□□ -2.1
UFD4YKL010C HSP33Q08914 237 aaKnown RBP1.93□□□□□ -2.1
UFD4YKL010C HSP32Q08992 237 aa1.93□□□□□ -2.1
UFD4YKL010C YOR114WQ12219 294 aa1.93□□□□□ -2.1
UFD4YKL010C REP2P03872 296 aa1.93□□□□□ -2.1
UFD4YKL010C GCD1P09032 578 aaPredicted RBP1.93□□□□□ -2.1
UFD4YKL010C STE50P25344 346 aa1.93□□□□□ -2.1
UFD4YKL010C ACB1P31787 87 aa1.93□□□□□ -2.1
UFD4YKL010C JEN1P36035 616 aa1.93□□□□□ -2.1
UFD4YKL010C TCM62P38228 572 aaKnown RBP1.93□□□□□ -2.1
UFD4YKL010C RTC2P38279 296 aa1.93□□□□□ -2.1
UFD4YKL010C VBA2P38358 474 aaKnown RBP1.93□□□□□ -2.1
UFD4YKL010C BAT1P38891 393 aaKnown RBP1.93□□□□□ -2.1
UFD4YKL010C SGF73P53165 657 aa1.93□□□□□ -2.1
UFD4YKL010C SYF2P53277 215 aaPredicted RBP1.93□□□□□ -2.1
UFD4YKL010C SAY1P53324 424 aa1.93□□□□□ -2.1
UFD4YKL010C YNR061CP53747 219 aa1.93□□□□□ -2.1
UFD4YKL010C MDM32Q12171 622 aa1.93□□□□□ -2.1
UFD4YKL010C TRM13Q12383 476 aa1.93□□□□□ -2.1
UFD4YKL010C YOR343CQ12484 108 aa1.93□□□□□ -2.1
UFD4YKL010C VMA9Q3E7B6 73 aa1.93□□□□□ -2.1
UFD4YKL010C GAL1P04385 528 aa1.93□□□□□ -2.1
UFD4YKL010C GAL4P04386 881 aa1.93□□□□□ -2.1
UFD4YKL010C MIR1P23641 311 aaKnown RBP1.93□□□□□ -2.1
UFD4YKL010C YKL162CP36052 402 aa1.93□□□□□ -2.1
UFD4YKL010C SHE2P36068 246 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
UFD4YKL010C YBR096WP38256 230 aa1.93□□□□□ -2.1
UFD4YKL010C YBR238CP38330 731 aaKnown RBP1.93□□□□□ -2.1
UFD4YKL010C LAS21P40367 830 aa1.93□□□□□ -2.1
UFD4YKL010C POG1P40473 351 aa1.93□□□□□ -2.1
UFD4YKL010C CAF16P43569 289 aa1.93□□□□□ -2.1
UFD4YKL010C ESF2P53743 316 aaKnown RBP1.93□□□□□ -2.1
UFD4YKL010C APJ1P53940 528 aa1.93□□□□□ -2.1
UFD4YKL010C DCI1Q08558 271 aa1.93□□□□□ -2.1
UFD4YKL010C HNT3Q08702 217 aa1.93□□□□□ -2.1
UFD4YKL010C ORT1Q12375 292 aa1.93□□□□□ -2.1
UFD4YKL010C YBR085C-AO43137 85 aa1.93□□□□□ -2.1
UFD4YKL010C YPK2P18961 677 aa1.93□□□□□ -2.1
UFD4YKL010C MGR1P25573 417 aa1.93□□□□□ -2.1
UFD4YKL010C YJU2P28320 278 aaPredicted RBP1.93□□□□□ -2.1
UFD4YKL010C EHD3P28817 500 aa1.93□□□□□ -2.1
UFD4YKL010C PMT2P31382 759 aa1.93□□□□□ -2.1
UFD4YKL010C MTH1P35198 433 aa1.93□□□□□ -2.1
UFD4YKL010C POP8P38208 133 aa1.93□□□□□ -2.1
UFD4YKL010C AVT7P40501 490 aa1.93□□□□□ -2.1
UFD4YKL010C MET28P40573 187 aa1.93□□□□□ -2.1
UFD4YKL010C SLS1P42900 643 aa1.93□□□□□ -2.1
UFD4YKL010C VPS73P53142 486 aaKnown RBP1.93□□□□□ -2.1
UFD4YKL010C FMP48P53233 369 aa1.93□□□□□ -2.1
UFD4YKL010C SFB2P53953 876 aa1.93□□□□□ -2.1
UFD4YKL010C PET191Q02772 108 aa1.93□□□□□ -2.1
UFD4YKL010C YDR391CQ04170 232 aa1.93□□□□□ -2.1
UFD4YKL010C UTP15Q04305 513 aaKnown RBP1.93□□□□□ -2.1
UFD4YKL010C YLR257WQ06146 321 aaKnown RBP1.93□□□□□ -2.1
UFD4YKL010C YIL046W-AQ3E7Z4 54 aa1.93□□□□□ -2.1
UFD4YKL010C MRP2P10663 115 aaPredicted RBP1.92□□□□□ -2.1
UFD4YKL010C RER1P25560 188 aa1.92□□□□□ -2.1
UFD4YKL010C ORC2P32833 620 aa1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms