RNA–Protein interactions for RNA: YHR039C-A

VMA10, Transcript of Subunit G of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA10, Length 345 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA10YHR039C-A HSM3P38348 480 aa2.41□□□□□ -2.02
VMA10YHR039C-A UFE1P41834 346 aa2.41□□□□□ -2.02
VMA10YHR039C-A MIC19P43594 170 aa2.41□□□□□ -2.02
VMA10YHR039C-A ACT1P60010 375 aaKnown RBP2.41□□□□□ -2.02
VMA10YHR039C-A RNY1Q02933 434 aaKnown RBP2.41□□□□□ -2.02
VMA10YHR039C-A UTP15Q04305 513 aaKnown RBP2.41□□□□□ -2.02
VMA10YHR039C-A TAF9Q05027 157 aa2.41□□□□□ -2.02
VMA10YHR039C-A YLR173WQ06247 608 aa2.41□□□□□ -2.02
VMA10YHR039C-A ARV1Q06541 321 aa2.41□□□□□ -2.02
VMA10YHR039C-A DIB1Q06819 143 aaPredicted RBP2.41□□□□□ -2.02
VMA10YHR039C-A RPS19AP07280 144 aaKnown RBP2.4□□□□□ -2.03
VMA10YHR039C-A RPS19BP07281 144 aaPredicted RBP2.4□□□□□ -2.03
VMA10YHR039C-A COX10P21592 462 aa2.4□□□□□ -2.03
VMA10YHR039C-A RRT12P25381 491 aa2.4□□□□□ -2.03
VMA10YHR039C-A POF1P25576 258 aa2.4□□□□□ -2.03
VMA10YHR039C-A RPB9P27999 122 aa2.4□□□□□ -2.03
VMA10YHR039C-A SKI2P35207 1287 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
VMA10YHR039C-A MRPS9P38120 278 aa2.4□□□□□ -2.03
VMA10YHR039C-A DDI1P40087 428 aa2.4□□□□□ -2.03
VMA10YHR039C-A YFL064CP43540 174 aa2.4□□□□□ -2.03
VMA10YHR039C-A PEX31P53203 462 aa2.4□□□□□ -2.03
VMA10YHR039C-A YGR067CP53243 804 aa2.4□□□□□ -2.03
VMA10YHR039C-A YNL134CP53912 376 aaKnown RBP2.4□□□□□ -2.03
VMA10YHR039C-A TRM44Q02648 567 aaKnown RBP2.4□□□□□ -2.03
VMA10YHR039C-A SFH1Q06168 426 aa2.4□□□□□ -2.03
VMA10YHR039C-A LOA1Q06508 300 aa2.4□□□□□ -2.03
VMA10YHR039C-A YPL278CQ08990 100 aa2.4□□□□□ -2.03
VMA10YHR039C-A YAL063C-AQ3E791 96 aa2.4□□□□□ -2.03
VMA10YHR039C-A AUS1Q08409 1394 aa2.39□□□□□ -2.03
VMA10YHR039C-A RPS3P05750 240 aaKnown RBP2.39□□□□□ -2.03
VMA10YHR039C-A CWP1P28319 239 aa2.39□□□□□ -2.03
VMA10YHR039C-A MID2P36027 376 aa2.39□□□□□ -2.03
VMA10YHR039C-A AIM29P36154 155 aa2.39□□□□□ -2.03
VMA10YHR039C-A MRPL3P36516 390 aa2.39□□□□□ -2.03
VMA10YHR039C-A ATG12P38316 186 aa2.39□□□□□ -2.03
VMA10YHR039C-A YFL012WP43580 148 aa2.39□□□□□ -2.03
VMA10YHR039C-A TAD2P47058 250 aa2.39□□□□□ -2.03
VMA10YHR039C-A COQ5P49017 307 aa2.39□□□□□ -2.03
VMA10YHR039C-A NUP84P52891 726 aa2.39□□□□□ -2.03
VMA10YHR039C-A LIF1P53150 421 aa2.39□□□□□ -2.03
VMA10YHR039C-A MNT4P53745 580 aa2.39□□□□□ -2.03
VMA10YHR039C-A ALG11P53954 548 aaKnown RBP2.39□□□□□ -2.03
VMA10YHR039C-A YPL113CQ02961 396 aa2.39□□□□□ -2.03
VMA10YHR039C-A VPS60Q03390 229 aa2.39□□□□□ -2.03
VMA10YHR039C-A OST6Q03723 332 aa2.39□□□□□ -2.03
VMA10YHR039C-A GRX3Q03835 250 aa2.39□□□□□ -2.03
VMA10YHR039C-A BTS1Q12051 335 aa2.39□□□□□ -2.03
VMA10YHR039C-A FLO11P08640 1367 aa2.38□□□□□ -2.03
VMA10YHR039C-A HIS1P00498 297 aaKnown RBP2.38□□□□□ -2.03
VMA10YHR039C-A VPS1P21576 704 aaKnown RBP2.38□□□□□ -2.03
VMA10YHR039C-A DAL82P21705 255 aa2.38□□□□□ -2.03
VMA10YHR039C-A ATG15P25641 520 aa2.38□□□□□ -2.03
VMA10YHR039C-A SPT8P38915 602 aa2.38□□□□□ -2.03
VMA10YHR039C-A AVT7P40501 490 aa2.38□□□□□ -2.03
VMA10YHR039C-A SER33P40510 469 aa2.38□□□□□ -2.03
VMA10YHR039C-A YIL054WP40524 105 aa2.38□□□□□ -2.03
VMA10YHR039C-A AGX1P43567 385 aa2.38□□□□□ -2.03
VMA10YHR039C-A YGL118CP53132 145 aa2.38□□□□□ -2.03
VMA10YHR039C-A SRL4Q03085 281 aa2.38□□□□□ -2.03
VMA10YHR039C-A ADH6Q04894 360 aaKnown RBP2.38□□□□□ -2.03
VMA10YHR039C-A SEC10Q06245 871 aa2.38□□□□□ -2.03
VMA10YHR039C-A TY3A-GQ12173 290 aa2.38□□□□□ -2.03
VMA10YHR039C-A MED4Q12343 284 aa2.38□□□□□ -2.03
VMA10YHR039C-A TY3A-IQ99219 290 aa2.38□□□□□ -2.03
VMA10YHR039C-A CHD1P32657 1468 aa2.38□□□□□ -2.03
VMA10YHR039C-A YAL064W-BO13512 126 aa2.37□□□□□ -2.03
VMA10YHR039C-A RAD3P06839 778 aa2.37□□□□□ -2.03
VMA10YHR039C-A FUS3P16892 353 aaKnown RBP2.37□□□□□ -2.03
VMA10YHR039C-A PRS4P38063 326 aaPredicted RBP2.37□□□□□ -2.03
VMA10YHR039C-A YHR045WP38775 560 aa2.37□□□□□ -2.03
VMA10YHR039C-A BIG1P38813 335 aa2.37□□□□□ -2.03
VMA10YHR039C-A ASP1P38986 381 aaPredicted RBP2.37□□□□□ -2.03
VMA10YHR039C-A BDH1P39714 382 aa2.37□□□□□ -2.03
VMA10YHR039C-A FRT2P39734 528 aa2.37□□□□□ -2.03
VMA10YHR039C-A KRE29P40026 464 aa2.37□□□□□ -2.03
VMA10YHR039C-A BNA6P43619 295 aa2.37□□□□□ -2.03
VMA10YHR039C-A PRP24P49960 444 aaKnown RBP2.37□□□□□ -2.03
VMA10YHR039C-A SWS2P53937 143 aa2.37□□□□□ -2.03
VMA10YHR039C-A TIM11P81449 96 aaPredicted RBP2.37□□□□□ -2.03
VMA10YHR039C-A SDC1Q03323 175 aa2.37□□□□□ -2.03
VMA10YHR039C-A BOP2Q06150 570 aa2.37□□□□□ -2.03
VMA10YHR039C-A CTR3Q06686 241 aa2.37□□□□□ -2.03
VMA10YHR039C-A SDO1Q07953 250 aaKnown RBP2.37□□□□□ -2.03
VMA10YHR039C-A PER33Q12144 273 aa2.37□□□□□ -2.03
VMA10YHR039C-A SME1Q12330 94 aaPredicted RBP2.37□□□□□ -2.03
VMA10YHR039C-A ATG31Q12421 196 aa2.37□□□□□ -2.03
VMA10YHR039C-A YOS9Q99220 542 aa2.37□□□□□ -2.03
VMA10YHR039C-A MRP1P10662 321 aaKnown RBP2.36□□□□□ -2.03
VMA10YHR039C-A CKA2P19454 339 aa2.36□□□□□ -2.03
VMA10YHR039C-A IMP1P28627 190 aa2.36□□□□□ -2.03
VMA10YHR039C-A PEX3P28795 441 aa2.36□□□□□ -2.03
VMA10YHR039C-A ZIP1P31111 875 aa2.36□□□□□ -2.03
VMA10YHR039C-A ARO4P32449 370 aaKnown RBP2.36□□□□□ -2.03
VMA10YHR039C-A ALK2P32789 676 aaPredicted RBP2.36□□□□□ -2.03
VMA10YHR039C-A PRS2P38620 318 aaKnown RBP2.36□□□□□ -2.03
VMA10YHR039C-A SHC1P39000 512 aa2.36□□□□□ -2.03
VMA10YHR039C-A SEN34P39707 275 aa2.36□□□□□ -2.03
VMA10YHR039C-A EDC2P40023 145 aaPredicted RBP2.36□□□□□ -2.03
VMA10YHR039C-A YIL012WP40551 113 aa2.36□□□□□ -2.03
VMA10YHR039C-A ASG7P46993 209 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 53.9 ms