RNA–Protein interactions for RNA: YGR245C

SDA1, Transcript of Protein required for actin organization and passage through Start, yeast

Gene SDA1, Length 2,304 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDA1	YGR245C	SLD7	Q08457	257 aa		4.6	□□□□□ -1.67
SDA1	YGR245C	MDM35	O60200	86 aa		4.59	□□□□□ -1.67
SDA1	YGR245C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
SDA1	YGR245C	FRE2	P36033	711 aa		4.59	□□□□□ -1.67
SDA1	YGR245C	DOA1	P36037	715 aa		4.59	□□□□□ -1.67
SDA1	YGR245C	YCR041W	P37265	110 aa		4.59	□□□□□ -1.67
SDA1	YGR245C	LYS1	P38998	373 aa	RIP-Chip data	4.59	□□□□□ -1.67	not detected
SDA1	YGR245C	SEO1	P39709	593 aa		4.59	□□□□□ -1.67
SDA1	YGR245C	COA1	P40452	197 aa		4.59	□□□□□ -1.67
SDA1	YGR245C	ERG10	P41338	398 aa	Known RBP	4.59	□□□□□ -1.67
SDA1	YGR245C	GAT1	P43574	510 aa		4.59	□□□□□ -1.67
SDA1	YGR245C	REX2	P54964	269 aa	Known RBP	4.59	□□□□□ -1.67
SDA1	YGR245C	SWP1	Q02795	286 aa		4.59	□□□□□ -1.67
SDA1	YGR245C	YLR283W	Q05867	314 aa		4.59	□□□□□ -1.67
SDA1	YGR245C	SWC7	Q06707	132 aa		4.59	□□□□□ -1.67
SDA1	YGR245C	YLR046C	Q12253	270 aa		4.59	□□□□□ -1.67
SDA1	YGR245C	APC2	Q12440	853 aa		4.59	□□□□□ -1.67
SDA1	YGR245C	ASK1	P35734	292 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	MRP21	P38175	177 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	HAT2	P39984	401 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	SHO1	P40073	367 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	ORM1	P53224	222 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	GTR2	P53290	341 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	NHP10	Q03435	203 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	CSN9	Q03981	162 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	GPI17	Q04080	534 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	CAC2	Q04199	468 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	LOT6	Q07923	191 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	REX4	Q08237	289 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	RSA1	Q08932	381 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	SIA1	Q12212	622 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	PEX11	Q12462	236 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	TPK3	P05986	398 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	GCN3	P14741	305 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	CCA1	P21269	546 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	RNQ1	P25367	405 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	ATO2	P32907	282 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	PTC1	P35182	281 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	YKL071W	P36086	256 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	YEL020C	P39994	560 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	YRB1	P41920	201 aa	Known RBP	4.58	□□□□□ -1.68
SDA1	YGR245C	YGR210C	P42942	411 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	SSN8	P47821	323 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
SDA1	YGR245C	GAL83	Q04739	417 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	PAM18	Q07914	168 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	ACF2	Q12168	779 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	MED11	Q99278	115 aa		4.58	□□□□□ -1.68
SDA1	YGR245C	THP2	O13539	261 aa	Known RBP	4.57	□□□□□ -1.68
SDA1	YGR245C	RAD7	P06779	565 aa		4.57	□□□□□ -1.68
SDA1	YGR245C	RHO1	P06780	209 aa	Known RBP	4.57	□□□□□ -1.68
SDA1	YGR245C	CMK2	P22517	447 aa		4.57	□□□□□ -1.68
SDA1	YGR245C	VMA5	P31412	392 aa	Known RBP	4.57	□□□□□ -1.68
SDA1	YGR245C	AVT6	P40074	448 aa		4.57	□□□□□ -1.68
SDA1	YGR245C	YRB2	P40517	327 aa		4.57	□□□□□ -1.68
SDA1	YGR245C	GLG2	P47011	380 aa		4.57	□□□□□ -1.68
SDA1	YGR245C	HAM1	P47119	197 aa	Known RBP	4.57	□□□□□ -1.68
SDA1	YGR245C	BIR1	P47134	954 aa		4.57	□□□□□ -1.68
SDA1	YGR245C	PRP38	Q00723	242 aa	Predicted RBP	4.57	□□□□□ -1.68
SDA1	YGR245C	SDO1	Q07953	250 aa	Known RBP	4.57	□□□□□ -1.68
SDA1	YGR245C	RPN8	Q08723	338 aa	Known RBP	4.57	□□□□□ -1.68
SDA1	YGR245C	YOR387C	Q08910	206 aa		4.57	□□□□□ -1.68
SDA1	YGR245C	LSB5	P25369	354 aa		4.57	□□□□□ -1.68
SDA1	YGR245C	BUB2	P26448	306 aa	Predicted RBP	4.57	□□□□□ -1.68
SDA1	YGR245C	AIM29	P36154	155 aa		4.57	□□□□□ -1.68
SDA1	YGR245C	LDB7	P38210	180 aa		4.57	□□□□□ -1.68
SDA1	YGR245C	DHH1	P39517	506 aa	Known RBP	4.57	□□□□□ -1.68
SDA1	YGR245C	YCH1	P42937	148 aa		4.57	□□□□□ -1.68
SDA1	YGR245C	IBD2	P53892	351 aa		4.57	□□□□□ -1.68
SDA1	YGR245C	RMI1	Q02685	241 aa		4.57	□□□□□ -1.68
SDA1	YGR245C	RVB1	Q03940	463 aa	Known RBP	4.57	□□□□□ -1.68
SDA1	YGR245C	TPO3	Q06451	622 aa		4.57	□□□□□ -1.68
SDA1	YGR245C	GRS2	Q06817	618 aa		4.57	□□□□□ -1.68
SDA1	YGR245C	SGT1	Q08446	395 aa		4.57	□□□□□ -1.68
SDA1	YGR245C	YOS9	Q99220	542 aa		4.57	□□□□□ -1.68
SDA1	YGR245C	DET1	Q99288	334 aa	Known RBP	4.57	□□□□□ -1.68
SDA1	YGR245C	YSR3	P23501	404 aa		4.56	□□□□□ -1.68
SDA1	YGR245C	ITR2	P30606	609 aa		4.56	□□□□□ -1.68
SDA1	YGR245C	YPT52	P36018	234 aa	Known RBP	4.56	□□□□□ -1.68
SDA1	YGR245C	PHD1	P36093	366 aa		4.56	□□□□□ -1.68
SDA1	YGR245C	CAF4	P36130	643 aa		4.56	□□□□□ -1.68
SDA1	YGR245C	PRS4	P38063	326 aa	Predicted RBP	4.56	□□□□□ -1.68
SDA1	YGR245C	DTR1	P38125	572 aa		4.56	□□□□□ -1.68
SDA1	YGR245C	QRI1	P43123	477 aa	Known RBP	4.56	□□□□□ -1.68
SDA1	YGR245C	MKC7	P53379	596 aa		4.56	□□□□□ -1.68
SDA1	YGR245C	PIR1	Q03178	341 aa		4.56	□□□□□ -1.68
SDA1	YGR245C	GAS3	Q03655	524 aa		4.56	□□□□□ -1.68
SDA1	YGR245C	PBP4	Q07362	185 aa	Known RBP	4.56	□□□□□ -1.68
SDA1	YGR245C	GAT3	Q07928	141 aa		4.56	□□□□□ -1.68
SDA1	YGR245C	SAM4	Q08985	325 aa	Known RBP	4.56	□□□□□ -1.68
SDA1	YGR245C	BSC1	Q12140	328 aa		4.56	□□□□□ -1.68
SDA1	YGR245C	PER33	Q12144	273 aa		4.56	□□□□□ -1.68
SDA1	YGR245C	AMD1	P15274	810 aa	Known RBP	4.56	□□□□□ -1.68
SDA1	YGR245C	URE2	P23202	354 aa	Known RBP	4.56	□□□□□ -1.68
SDA1	YGR245C	PTP1	P25044	335 aa		4.56	□□□□□ -1.68
SDA1	YGR245C	COX13	P32799	129 aa		4.56	□□□□□ -1.68
SDA1	YGR245C	SPC34	P36131	295 aa		4.56	□□□□□ -1.68
SDA1	YGR245C	BAT1	P38891	393 aa	Known RBP	4.56	□□□□□ -1.68
SDA1	YGR245C	KRE29	P40026	464 aa		4.56	□□□□□ -1.68
SDA1	YGR245C	HIT1	P46973	164 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 393.5 ms