RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C YPL264CQ08980 353 aa3.28□□□□□ -1.88
SCL1YGL011C SSA3P09435 649 aaKnown RBP3.27□□□□□ -1.89
SCL1YGL011C OM45P16547 393 aa3.27□□□□□ -1.89
SCL1YGL011C DAL81P21657 970 aa3.27□□□□□ -1.89
SCL1YGL011C YSR3P23501 404 aa3.27□□□□□ -1.89
SCL1YGL011C IMP1P28627 190 aa3.27□□□□□ -1.89
SCL1YGL011C RIB7P33312 244 aa3.27□□□□□ -1.89
SCL1YGL011C MRPL3P36516 390 aa3.27□□□□□ -1.89
SCL1YGL011C YIL059CP40520 121 aa3.27□□□□□ -1.89
SCL1YGL011C PRP24P49960 444 aaKnown RBP3.27□□□□□ -1.89
SCL1YGL011C UFD1P53044 361 aa3.27□□□□□ -1.89
SCL1YGL011C TPN1P53099 579 aa3.27□□□□□ -1.89
SCL1YGL011C YPL113CQ02961 396 aa3.27□□□□□ -1.89
SCL1YGL011C VTI1Q04338 217 aa3.27□□□□□ -1.89
SCL1YGL011C PRE7P23724 241 aaKnown RBP3.26□□□□□ -1.89
SCL1YGL011C SUA5P32579 426 aa3.26□□□□□ -1.89
SCL1YGL011C GCG1P32656 232 aaKnown RBP3.26□□□□□ -1.89
SCL1YGL011C KRE29P40026 464 aa3.26□□□□□ -1.89
SCL1YGL011C AVT7P40501 490 aa3.26□□□□□ -1.89
SCL1YGL011C CPR7P47103 393 aa3.26□□□□□ -1.89
SCL1YGL011C LIF1P53150 421 aa3.26□□□□□ -1.89
SCL1YGL011C SPP2Q02521 185 aa3.26□□□□□ -1.89
SCL1YGL011C PET494P07390 489 aaPredicted RBP3.25□□□□□ -1.89
SCL1YGL011C ATG15P25641 520 aa3.25□□□□□ -1.89
SCL1YGL011C CSE1P33307 960 aa3.25□□□□□ -1.89
SCL1YGL011C EBP2P36049 427 aaKnown RBP3.25□□□□□ -1.89
SCL1YGL011C LSB1P53281 241 aa3.25□□□□□ -1.89
SCL1YGL011C CPD1P53314 239 aa3.25□□□□□ -1.89
SCL1YGL011C YML018CQ03730 393 aa3.25□□□□□ -1.89
SCL1YGL011C VBA1Q04301 562 aa3.25□□□□□ -1.89
SCL1YGL011C GTO3Q04806 366 aa3.25□□□□□ -1.89
SCL1YGL011C RRP36Q12481 300 aaPredicted RBP3.25□□□□□ -1.89
SCL1YGL011C RPS23AP0CX29 145 aaKnown RBP3.24□□□□□ -1.89
SCL1YGL011C RPS23BP0CX30 145 aa3.24□□□□□ -1.89
SCL1YGL011C ARO4P32449 370 aaKnown RBP3.24□□□□□ -1.89
SCL1YGL011C SEN34P39707 275 aa3.24□□□□□ -1.89
SCL1YGL011C CDC14Q00684 551 aa3.24□□□□□ -1.89
SCL1YGL011C MRS2Q01926 470 aa3.24□□□□□ -1.89
SCL1YGL011C SGT2Q12118 346 aaKnown RBP3.24□□□□□ -1.89
SCL1YGL011C ATG12P38316 186 aa3.23□□□□□ -1.89
SCL1YGL011C MRX5P47007 382 aa3.23□□□□□ -1.89
SCL1YGL011C PEX31P53203 462 aa3.23□□□□□ -1.89
SCL1YGL011C TAF9Q05027 157 aa3.23□□□□□ -1.89
SCL1YGL011C INO80P53115 1489 aa3.22□□□□□ -1.89
SCL1YGL011C MRPL37P36532 105 aa3.22□□□□□ -1.89
SCL1YGL011C YBL081WP38180 368 aaKnown RBP3.22□□□□□ -1.89
SCL1YGL011C EMC2P47133 292 aaKnown RBP3.22□□□□□ -1.89
SCL1YGL011C IBA57P47158 497 aa3.22□□□□□ -1.89
SCL1YGL011C RPN14P53196 417 aa3.22□□□□□ -1.89
SCL1YGL011C OSH6Q02201 448 aa3.22□□□□□ -1.89
SCL1YGL011C VPS60Q03390 229 aa3.22□□□□□ -1.89
SCL1YGL011C CSI1Q04368 295 aa3.22□□□□□ -1.89
SCL1YGL011C DXO1Q06349 442 aa3.22□□□□□ -1.89
SCL1YGL011C YDL144CQ07589 356 aa3.22□□□□□ -1.89
SCL1YGL011C SSK22P25390 1331 aaPredicted RBP3.21□□□□□ -1.89
SCL1YGL011C RPS3P05750 240 aaKnown RBP3.21□□□□□ -1.9
SCL1YGL011C PHO80P20052 293 aa3.21□□□□□ -1.9
SCL1YGL011C YHL044WP38727 235 aa3.21□□□□□ -1.9
SCL1YGL011C RCY1P39531 840 aa3.21□□□□□ -1.9
SCL1YGL011C AVT6P40074 448 aa3.21□□□□□ -1.9
SCL1YGL011C SYS1P41544 203 aa3.21□□□□□ -1.9
SCL1YGL011C LOA1Q06508 300 aa3.21□□□□□ -1.9
SCL1YGL011C YLL007CQ07799 665 aa3.21□□□□□ -1.9
SCL1YGL011C IES3Q12345 250 aa3.21□□□□□ -1.9
SCL1YGL011C POF1P25576 258 aa3.2□□□□□ -1.9
SCL1YGL011C COT1P32798 439 aa3.2□□□□□ -1.9
SCL1YGL011C MED8P38304 223 aa3.2□□□□□ -1.9
SCL1YGL011C SCC4P40090 624 aa3.2□□□□□ -1.9
SCL1YGL011C YFR045WP43617 309 aa3.2□□□□□ -1.9
SCL1YGL011C COG7P53195 279 aa3.2□□□□□ -1.9
SCL1YGL011C SFH1Q06168 426 aa3.2□□□□□ -1.9
SCL1YGL011C ARV1Q06541 321 aa3.2□□□□□ -1.9
SCL1YGL011C RPP0P05317 312 aaKnown RBP3.19□□□□□ -1.9
SCL1YGL011C YAK1P14680 807 aa3.19□□□□□ -1.9
SCL1YGL011C POP8P38208 133 aa3.19□□□□□ -1.9
SCL1YGL011C ECM14P38836 430 aa3.19□□□□□ -1.9
SCL1YGL011C COA1P40452 197 aa3.19□□□□□ -1.9
SCL1YGL011C ECO1P43605 281 aa3.19□□□□□ -1.9
SCL1YGL011C SWT21P53873 357 aaPredicted RBP3.19□□□□□ -1.9
SCL1YGL011C NNT1Q05874 261 aa3.19□□□□□ -1.9
SCL1YGL011C GMC2Q06201 188 aa3.19□□□□□ -1.9
SCL1YGL011C YPR063CQ12160 140 aa3.19□□□□□ -1.9
SCL1YGL011C RFM1Q12192 310 aa3.19□□□□□ -1.9
SCL1YGL011C YPS3Q12303 508 aa3.19□□□□□ -1.9
SCL1YGL011C MET16P18408 261 aaPredicted RBP3.18□□□□□ -1.9
SCL1YGL011C CAT2P32796 670 aaKnown RBP3.18□□□□□ -1.9
SCL1YGL011C SMC2P38989 1170 aaKnown RBP3.18□□□□□ -1.9
SCL1YGL011C SER33P40510 469 aa3.18□□□□□ -1.9
SCL1YGL011C FMP41P53889 259 aaKnown RBP3.18□□□□□ -1.9
SCL1YGL011C YMR316C-AI2HB70 103 aa3.17□□□□□ -1.9
SCL1YGL011C KRE6P32486 720 aa3.17□□□□□ -1.9
SCL1YGL011C TRM44Q02648 567 aaKnown RBP3.17□□□□□ -1.9
SCL1YGL011C SDC1Q03323 175 aa3.17□□□□□ -1.9
SCL1YGL011C COX20Q04935 205 aa3.17□□□□□ -1.9
SCL1YGL011C ATG5Q12380 294 aa3.17□□□□□ -1.9
SCL1YGL011C PAN1P32521 1480 aa3.16□□□□□ -1.9
SCL1YGL011C YAL064W-BO13512 126 aa3.16□□□□□ -1.9
SCL1YGL011C OSM1P21375 501 aaKnown RBP3.16□□□□□ -1.9
SCL1YGL011C TKL2P33315 681 aa3.16□□□□□ -1.9
SCL1YGL011C HSM3P38348 480 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms