RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN12, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN12YFR052W YGL101WP53144 215 aa4.43□□□□□ -1.7
RPN12YFR052W ASI3P53983 676 aa4.43□□□□□ -1.7
RPN12YFR052W RRP9Q06506 573 aaKnown RBP4.43□□□□□ -1.7
RPN12YFR052W TAZ1Q06510 381 aa4.43□□□□□ -1.7
RPN12YFR052W RAF1Q06891 181 aa4.43□□□□□ -1.7
RPN12YFR052W NIP7Q08962 181 aaKnown RBP4.43□□□□□ -1.7
RPN12YFR052W APC2Q12440 853 aa4.43□□□□□ -1.7
RPN12YFR052W RTN2Q12443 393 aa4.43□□□□□ -1.7
RPN12YFR052W KIN28P06242 306 aa4.42□□□□□ -1.7
RPN12YFR052W DPM1P14020 267 aaKnown RBP4.42□□□□□ -1.7
RPN12YFR052W PCL1P24867 279 aa4.42□□□□□ -1.7
RPN12YFR052W RPC82P32349 654 aa4.42□□□□□ -1.7
RPN12YFR052W PUP2P32379 260 aa4.42□□□□□ -1.7
RPN12YFR052W MRPS5P33759 307 aa4.42□□□□□ -1.7
RPN12YFR052W MTR2P34232 184 aaKnown RBP4.42□□□□□ -1.7
RPN12YFR052W CHL4P38907 458 aa4.42□□□□□ -1.7
RPN12YFR052W EXG2P52911 562 aa4.42□□□□□ -1.7
RPN12YFR052W PCP1P53259 346 aa4.42□□□□□ -1.7
RPN12YFR052W PGA1P53896 198 aa4.42□□□□□ -1.7
RPN12YFR052W SNZ1Q03148 297 aa4.42□□□□□ -1.7
RPN12YFR052W YMD8Q03697 442 aa4.42□□□□□ -1.7
RPN12YFR052W OST6Q03723 332 aa4.42□□□□□ -1.7
RPN12YFR052W BNA7Q04066 261 aa4.42□□□□□ -1.7
RPN12YFR052W API2Q04413 109 aa4.42□□□□□ -1.7
RPN12YFR052W YLR345WQ06137 509 aa4.42□□□□□ -1.7
RPN12YFR052W RTC5Q12108 567 aaKnown RBP4.42□□□□□ -1.7
RPN12YFR052W TAF3Q12297 353 aa4.42□□□□□ -1.7
RPN12YFR052W DBP10Q12389 995 aaKnown RBP4.42□□□□□ -1.7
RPN12YFR052W YPL119C-AQ3E751 87 aa4.42□□□□□ -1.7
RPN12YFR052W MHF1Q3E835 90 aa4.42□□□□□ -1.7
RPN12YFR052W OPI3P05375 206 aa4.41□□□□□ -1.7
RPN12YFR052W MET2P08465 486 aa4.41□□□□□ -1.7
RPN12YFR052W SED4P25365 1065 aa4.41□□□□□ -1.7
RPN12YFR052W CAM1P29547 415 aaKnown RBP4.41□□□□□ -1.7
RPN12YFR052W OAC1P32332 324 aa4.41□□□□□ -1.7
RPN12YFR052W YGP1P38616 354 aaKnown RBP4.41□□□□□ -1.7
RPN12YFR052W ARN2P38724 620 aa4.41□□□□□ -1.7
RPN12YFR052W MOB2P43563 287 aa4.41□□□□□ -1.7
RPN12YFR052W SSY5P47002 699 aa4.41□□□□□ -1.7
RPN12YFR052W DPB11P47027 764 aaPredicted RBP4.41□□□□□ -1.7
RPN12YFR052W MDE1P47095 244 aa4.41□□□□□ -1.7
RPN12YFR052W NUP116Q02630 1113 aa4.41□□□□□ -1.7
RPN12YFR052W YAP6Q03935 383 aa4.41□□□□□ -1.7
RPN12YFR052W MIM1Q08176 113 aa4.41□□□□□ -1.7
RPN12YFR052W RNH203Q12338 110 aa4.41□□□□□ -1.7
RPN12YFR052W CDC36P06100 191 aaPredicted RBP4.4□□□□□ -1.71
RPN12YFR052W RPS16AP0CX51 143 aaKnown RBP4.4□□□□□ -1.71
RPN12YFR052W RPS16BP0CX52 143 aaKnown RBP4.4□□□□□ -1.71
RPN12YFR052W PDA1P16387 420 aaKnown RBP4.4□□□□□ -1.71
RPN12YFR052W STE18P18852 110 aa4.4□□□□□ -1.71
RPN12YFR052W EXG1P23776 448 aaKnown RBP4.4□□□□□ -1.71
RPN12YFR052W YCL042WP25572 119 aa4.4□□□□□ -1.71
RPN12YFR052W MAL32P38158 584 aa4.4□□□□□ -1.71
RPN12YFR052W YHL037CP38733 133 aa4.4□□□□□ -1.71
RPN12YFR052W ECM1P39715 212 aa4.4□□□□□ -1.71
RPN12YFR052W IDS2P46958 469 aa4.4□□□□□ -1.71
RPN12YFR052W MAL12P53341 584 aa4.4□□□□□ -1.71
RPN12YFR052W MRPL19P53875 158 aa4.4□□□□□ -1.71
RPN12YFR052W NUP49Q02199 472 aa4.4□□□□□ -1.71
RPN12YFR052W TMA10Q06177 86 aa4.4□□□□□ -1.71
RPN12YFR052W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71not detected
RPN12YFR052W NCE102Q12207 173 aaRIP-Chip data4.4□□□□□ -1.71not detected
RPN12YFR052W SIA1Q12212 622 aa4.4□□□□□ -1.71
RPN12YFR052W PRB1P09232 635 aa4.39□□□□□ -1.71
RPN12YFR052W URE2P23202 354 aaKnown RBP4.39□□□□□ -1.71
RPN12YFR052W STE50P25344 346 aa4.39□□□□□ -1.71
RPN12YFR052W PPG1P32838 368 aa4.39□□□□□ -1.71
RPN12YFR052W YBR285WP38354 144 aa4.39□□□□□ -1.71
RPN12YFR052W PHO90P39535 881 aa4.39□□□□□ -1.71
RPN12YFR052W AIM10P39965 576 aaKnown RBP4.39□□□□□ -1.71
RPN12YFR052W SIT1P39980 628 aa4.39□□□□□ -1.71
RPN12YFR052W YER084WP40057 128 aa4.39□□□□□ -1.71
RPN12YFR052W GAT2P40209 560 aa4.39□□□□□ -1.71
RPN12YFR052W YMR144WP40214 342 aaKnown RBP4.39□□□□□ -1.71
RPN12YFR052W AVT7P40501 490 aa4.39□□□□□ -1.71
RPN12YFR052W POP1P41812 875 aa4.39□□□□□ -1.71
RPN12YFR052W RET2P43621 546 aa4.39□□□□□ -1.71
RPN12YFR052W SFH5P47008 294 aa4.39□□□□□ -1.71
RPN12YFR052W VMA10P48836 114 aaKnown RBP4.39□□□□□ -1.71
RPN12YFR052W NIT3P49954 291 aa4.39□□□□□ -1.71
RPN12YFR052W RMD9P53140 646 aaKnown RBP4.39□□□□□ -1.71
RPN12YFR052W NQM1P53228 333 aaPredicted RBP4.39□□□□□ -1.71
RPN12YFR052W VOA1P53262 265 aa4.39□□□□□ -1.71
RPN12YFR052W COG5P53951 403 aa4.39□□□□□ -1.71
RPN12YFR052W PET191Q02772 108 aa4.39□□□□□ -1.71
RPN12YFR052W RCE1Q03530 315 aa4.39□□□□□ -1.71
RPN12YFR052W IPK1Q06667 281 aa4.39□□□□□ -1.71
RPN12YFR052W RXT3Q07458 294 aa4.39□□□□□ -1.71
RPN12YFR052W YDL114WQ07530 308 aa4.39□□□□□ -1.71
RPN12YFR052W RKM1Q08961 583 aaPredicted RBP4.39□□□□□ -1.71
RPN12YFR052W YOR289WQ12012 251 aaPredicted RBP4.39□□□□□ -1.71
RPN12YFR052W PST2Q12335 198 aaKnown RBP4.39□□□□□ -1.71
RPN12YFR052W SPO7P18410 259 aa4.38□□□□□ -1.71
RPN12YFR052W PHO80P20052 293 aa4.38□□□□□ -1.71
RPN12YFR052W FAR1P21268 830 aa4.38□□□□□ -1.71
RPN12YFR052W KRR1P25586 316 aaPredicted RBP4.38□□□□□ -1.71
RPN12YFR052W ITR1P30605 584 aa4.38□□□□□ -1.71
RPN12YFR052W NDC1P32500 655 aa4.38□□□□□ -1.71
RPN12YFR052W RPC34P32910 317 aa4.38□□□□□ -1.71
RPN12YFR052W AFR1P33304 620 aa4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 139.1 ms