RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C GAS1P22146 559 aaKnown RBP5.88□□□□□ -1.47
YPT1YFL038C GPI12P23797 304 aa5.88□□□□□ -1.47
YPT1YFL038C DCG1P32460 244 aa5.88□□□□□ -1.47
YPT1YFL038C PAD1P33751 242 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
YPT1YFL038C NSG1P38837 291 aa5.88□□□□□ -1.47
YPT1YFL038C VPS52P39904 641 aa5.88□□□□□ -1.47
YPT1YFL038C YMR144WP40214 342 aaKnown RBP5.88□□□□□ -1.47
YPT1YFL038C QDR1P40475 563 aa5.88□□□□□ -1.47
YPT1YFL038C UTP25P40498 721 aaKnown RBP5.88□□□□□ -1.47
YPT1YFL038C LSM1P47017 172 aaKnown RBP5.88□□□□□ -1.47
YPT1YFL038C LOH1P47055 219 aa5.88□□□□□ -1.47
YPT1YFL038C LYS20P48570 428 aaKnown RBP5.88□□□□□ -1.47
YPT1YFL038C FMP48P53233 369 aa5.88□□□□□ -1.47
YPT1YFL038C SIZ1Q04195 904 aa5.88□□□□□ -1.47
YPT1YFL038C YLR030WQ07967 263 aa5.88□□□□□ -1.47
YPT1YFL038C HRT1Q08273 121 aa5.88□□□□□ -1.47
YPT1YFL038C RDR1Q08904 546 aa5.88□□□□□ -1.47
YPT1YFL038C TMS1Q12116 473 aa5.88□□□□□ -1.47
YPT1YFL038C LYS21Q12122 440 aaKnown RBP5.88□□□□□ -1.47
YPT1YFL038C ATP14Q12349 124 aa5.88□□□□□ -1.47
YPT1YFL038C TRM13Q12383 476 aa5.88□□□□□ -1.47
YPT1YFL038C HOM3P10869 527 aa5.87□□□□□ -1.47
YPT1YFL038C RPL3P14126 387 aaKnown RBP5.87□□□□□ -1.47
YPT1YFL038C MXR2P25566 168 aa5.87□□□□□ -1.47
YPT1YFL038C STP22P25604 385 aa5.87□□□□□ -1.47
YPT1YFL038C IMG1P25626 169 aa5.87□□□□□ -1.47
YPT1YFL038C NAM9P27929 486 aa5.87□□□□□ -1.47
YPT1YFL038C MRP17P28778 131 aa5.87□□□□□ -1.47
YPT1YFL038C CAM1P29547 415 aaKnown RBP5.87□□□□□ -1.47
YPT1YFL038C RPS27AP35997 82 aaKnown RBP5.87□□□□□ -1.47
YPT1YFL038C FLO10P36170 1169 aa5.87□□□□□ -1.47
YPT1YFL038C RPS27BP38711 82 aa5.87□□□□□ -1.47
YPT1YFL038C YIL152WP40455 235 aa5.87□□□□□ -1.47
YPT1YFL038C YIL067CP40514 678 aa5.87□□□□□ -1.47
YPT1YFL038C YIL060WP40519 144 aa5.87□□□□□ -1.47
YPT1YFL038C UBX6P47049 396 aa5.87□□□□□ -1.47
YPT1YFL038C JAC1P53193 184 aa5.87□□□□□ -1.47
YPT1YFL038C MTM1P53320 366 aa5.87□□□□□ -1.47
YPT1YFL038C SUN4P53616 420 aa5.87□□□□□ -1.47
YPT1YFL038C SNP1Q00916 300 aaPredicted RBP5.87□□□□□ -1.47
YPT1YFL038C STP3Q05937 343 aa5.87□□□□□ -1.47
YPT1YFL038C YLR352WQ06479 807 aa5.87□□□□□ -1.47
YPT1YFL038C ENB1Q08299 606 aa5.87□□□□□ -1.47
YPT1YFL038C SYC1Q08553 188 aaPredicted RBP5.87□□□□□ -1.47
YPT1YFL038C FEX2Q08991 375 aa5.87□□□□□ -1.47
YPT1YFL038C RLM1Q12224 676 aa5.87□□□□□ -1.47
YPT1YFL038C GCD1P09032 578 aaPredicted RBP5.86□□□□□ -1.47
YPT1YFL038C MAG1P22134 296 aaKnown RBP5.86□□□□□ -1.47
YPT1YFL038C CWH43P25618 953 aa5.86□□□□□ -1.47
YPT1YFL038C YCR061WP25639 631 aa5.86□□□□□ -1.47
YPT1YFL038C CPR3P25719 182 aa5.86□□□□□ -1.47
YPT1YFL038C YBR238CP38330 731 aaKnown RBP5.86□□□□□ -1.47
YPT1YFL038C MTC4P38335 694 aaKnown RBP5.86□□□□□ -1.47
YPT1YFL038C CHS7P38843 316 aa5.86□□□□□ -1.47
YPT1YFL038C TIR3P40552 269 aa5.86□□□□□ -1.47
YPT1YFL038C SEH1P53011 349 aaKnown RBP5.86□□□□□ -1.47
YPT1YFL038C YGR266WP53326 701 aa5.86□□□□□ -1.47
YPT1YFL038C RHO5P53879 331 aaKnown RBP5.86□□□□□ -1.47
YPT1YFL038C NIS1P53939 407 aa5.86□□□□□ -1.47
YPT1YFL038C YLR460CP54007 376 aa5.86□□□□□ -1.47
YPT1YFL038C LAP3Q01532 483 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
YPT1YFL038C EKI1Q03764 534 aa5.86□□□□□ -1.47
YPT1YFL038C YLR031WQ07978 186 aa5.86□□□□□ -1.47
YPT1YFL038C ORT1Q12375 292 aa5.86□□□□□ -1.47
YPT1YFL038C TDH2P00358 332 aaKnown RBP5.85□□□□□ -1.47
YPT1YFL038C AAC1P04710 309 aa5.85□□□□□ -1.47
YPT1YFL038C OPI3P05375 206 aa5.85□□□□□ -1.47
YPT1YFL038C RPS13P05756 151 aaKnown RBP5.85□□□□□ -1.47
YPT1YFL038C DAT1P13483 248 aaKnown RBP5.85□□□□□ -1.47
YPT1YFL038C RPB8P20436 146 aa5.85□□□□□ -1.47
YPT1YFL038C STE50P25344 346 aa5.85□□□□□ -1.47
YPT1YFL038C SPT10P35208 640 aa5.85□□□□□ -1.47
YPT1YFL038C OSH7P38755 437 aa5.85□□□□□ -1.47
YPT1YFL038C YIL086CP40503 102 aa5.85□□□□□ -1.47
YPT1YFL038C YJR141WP47172 347 aaPredicted RBP5.85□□□□□ -1.47
YPT1YFL038C YGR042WP53227 271 aa5.85□□□□□ -1.47
YPT1YFL038C GTF1P53260 183 aaPredicted RBP5.85□□□□□ -1.47
YPT1YFL038C RSM27P53305 110 aa5.85□□□□□ -1.47
YPT1YFL038C SOK2P53438 785 aaPredicted RBP5.85□□□□□ -1.47
YPT1YFL038C MPA43P53583 542 aaPredicted RBP5.85□□□□□ -1.47
YPT1YFL038C GIM3P53900 129 aa5.85□□□□□ -1.47
YPT1YFL038C YLR152CP54072 576 aa5.85□□□□□ -1.47
YPT1YFL038C SMX3P54999 86 aaPredicted RBP5.85□□□□□ -1.47
YPT1YFL038C APM1Q00776 475 aaPredicted RBP5.85□□□□□ -1.47
YPT1YFL038C TIM44Q01852 431 aa5.85□□□□□ -1.47
YPT1YFL038C CTF19Q02732 369 aa5.85□□□□□ -1.47
YPT1YFL038C SNX41Q04053 625 aa5.85□□□□□ -1.47
YPT1YFL038C MRX8Q05473 314 aa5.85□□□□□ -1.47
YPT1YFL038C YOL073CQ08232 322 aa5.85□□□□□ -1.47
YPT1YFL038C BSC6Q08280 497 aa5.85□□□□□ -1.47
YPT1YFL038C REX3Q12090 404 aa5.85□□□□□ -1.47
YPT1YFL038C PRM4Q12498 284 aa5.85□□□□□ -1.47
YPT1YFL038C YHR213W-AQ8TGT4 77 aa5.85□□□□□ -1.47
YPT1YFL038C YLR358CO13565 187 aa5.84□□□□□ -1.47
YPT1YFL038C PHO2P07269 559 aa5.84□□□□□ -1.47
YPT1YFL038C PRB1P09232 635 aa5.84□□□□□ -1.47
YPT1YFL038C YSF3P0C074 85 aaPredicted RBP5.84□□□□□ -1.47
YPT1YFL038C ERG4P25340 473 aa5.84□□□□□ -1.47
YPT1YFL038C PET18P25362 215 aa5.84□□□□□ -1.47
YPT1YFL038C NAB2P32505 525 aaKnown RBP RIP-Chip data5.84□□□□□ -1.47not detected
Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms