RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C TSR2Q06672 205 aaKnown RBP-0.79□□□□□ -2.54
SPG3YDR504C YBL112CQ3E7Y4 105 aa-0.79□□□□□ -2.54
SPG3YDR504C SIF2P38262 535 aa-0.8□□□□□ -2.54
SPG3YDR504C MRS2Q01926 470 aa-0.8□□□□□ -2.54
SPG3YDR504C ECM18Q04623 453 aa-0.8□□□□□ -2.54
SPG3YDR504C YLR012CQ07927 99 aa-0.8□□□□□ -2.54
SPG3YDR504C MHT1Q12525 324 aa-0.8□□□□□ -2.54
SPG3YDR504C LAG2Q92325 660 aa-0.8□□□□□ -2.54
SPG3YDR504C PUP2P32379 260 aa-0.81□□□□□ -2.54
SPG3YDR504C MEI5P32489 222 aa-0.81□□□□□ -2.54
SPG3YDR504C PEX32P38292 413 aa-0.81□□□□□ -2.54
SPG3YDR504C ICE2P40499 491 aa-0.81□□□□□ -2.54
SPG3YDR504C RPE1P46969 238 aa-0.81□□□□□ -2.54
SPG3YDR504C YHC3P47040 408 aa-0.81□□□□□ -2.54
SPG3YDR504C YPL039WQ03080 316 aa-0.81□□□□□ -2.54
SPG3YDR504C RPL1AP0CX43 217 aaKnown RBP-0.82□□□□□ -2.54
SPG3YDR504C RPL1BP0CX44 217 aaKnown RBP-0.82□□□□□ -2.54
SPG3YDR504C VMA2P16140 517 aaKnown RBP-0.82□□□□□ -2.54
SPG3YDR504C PEX4P29340 183 aa-0.82□□□□□ -2.54
SPG3YDR504C SOP4P39543 234 aaPredicted RBP-0.82□□□□□ -2.54
SPG3YDR504C KRE29P40026 464 aa-0.82□□□□□ -2.54
SPG3YDR504C BUD25P85052 153 aa-0.82□□□□□ -2.54
SPG3YDR504C YPL119C-AQ3E751 87 aa-0.82□□□□□ -2.54
SPG3YDR504C PDX1P16451 410 aa-0.83□□□□□ -2.54
SPG3YDR504C CCA1P21269 546 aa-0.83□□□□□ -2.54
SPG3YDR504C RPC53P25441 422 aa-0.83□□□□□ -2.54
SPG3YDR504C BMH1P29311 267 aaKnown RBP-0.83□□□□□ -2.54
SPG3YDR504C CYT2Q00873 224 aa-0.83□□□□□ -2.54
SPG3YDR504C ACC1Q00955 2233 aaKnown RBP-0.83□□□□□ -2.54
SPG3YDR504C DDI2P0CH63 225 aa-0.84□□□□□ -2.54
SPG3YDR504C DDI3P0CH64 225 aa-0.84□□□□□ -2.54
SPG3YDR504C DOG1P38774 246 aa-0.84□□□□□ -2.54
SPG3YDR504C MPA43P53583 542 aaPredicted RBP-0.84□□□□□ -2.54
SPG3YDR504C CTR3Q06686 241 aa-0.84□□□□□ -2.54
SPG3YDR504C SAS5Q99314 248 aa-0.84□□□□□ -2.54
SPG3YDR504C MAS1P10507 462 aa-0.85□□□□□ -2.55
SPG3YDR504C GPA2P10823 449 aa-0.85□□□□□ -2.55
SPG3YDR504C ERG25P53045 309 aa-0.85□□□□□ -2.55
SPG3YDR504C IFM1P25038 676 aa-0.86□□□□□ -2.55
SPG3YDR504C DRE2P36152 348 aa-0.86□□□□□ -2.55
SPG3YDR504C YHR022CP38763 256 aa-0.86□□□□□ -2.55
SPG3YDR504C CAJ1P39101 391 aa-0.86□□□□□ -2.55
SPG3YDR504C YEL067CP39978 195 aa-0.86□□□□□ -2.55
SPG3YDR504C YIL089WP40500 205 aa-0.86□□□□□ -2.55
SPG3YDR504C TAD2P47058 250 aa-0.86□□□□□ -2.55
SPG3YDR504C YLR446WQ06204 433 aa-0.86□□□□□ -2.55
SPG3YDR504C CDC31P06704 161 aaKnown RBP-0.87□□□□□ -2.55
SPG3YDR504C PPH21P23594 369 aa-0.87□□□□□ -2.55
SPG3YDR504C CIN8P27895 1000 aa-0.87□□□□□ -2.55
SPG3YDR504C GDH2P33327 1092 aaKnown RBP-0.87□□□□□ -2.55
SPG3YDR504C YMR134WP40207 237 aa-0.87□□□□□ -2.55
SPG3YDR504C KEL2P50090 882 aa-0.87□□□□□ -2.55
SPG3YDR504C YNR062CP53748 327 aa-0.87□□□□□ -2.55
SPG3YDR504C MRPS8Q03799 155 aa-0.87□□□□□ -2.55
SPG3YDR504C SPE3Q12074 293 aaKnown RBP-0.87□□□□□ -2.55
SPG3YDR504C VAB2P40003 282 aa-0.88□□□□□ -2.55
SPG3YDR504C PXR1P53335 271 aaPredicted RBP-0.88□□□□□ -2.55
SPG3YDR504C UBC7Q02159 165 aa-0.88□□□□□ -2.55
SPG3YDR504C MEU1Q07938 337 aaKnown RBP RIP-Chip data-0.88□□□□□ -2.55not detected
SPG3YDR504C RBK1P25332 333 aa-0.89□□□□□ -2.55
SPG3YDR504C PHO88P38264 188 aaPredicted RBP-0.89□□□□□ -2.55
SPG3YDR504C AVT7P40501 490 aa-0.89□□□□□ -2.55
SPG3YDR504C YPT32P51996 222 aaKnown RBP-0.89□□□□□ -2.55
SPG3YDR504C ERG2P32352 222 aa-0.9□□□□□ -2.55
SPG3YDR504C PHO89P38361 574 aa-0.9□□□□□ -2.55
SPG3YDR504C YJR079WP47126 109 aa-0.9□□□□□ -2.55
SPG3YDR504C PEX10Q05568 337 aa-0.9□□□□□ -2.55
SPG3YDR504C YOL160WQ08321 113 aa-0.9□□□□□ -2.55
SPG3YDR504C DPB2P24482 689 aaPredicted RBP-0.91□□□□□ -2.56
SPG3YDR504C YHR122WP38829 231 aa-0.91□□□□□ -2.56
SPG3YDR504C EFM4P40516 257 aa-0.91□□□□□ -2.56
SPG3YDR504C SMT3Q12306 101 aaKnown RBP-0.91□□□□□ -2.56
SPG3YDR504C THR4P16120 514 aaKnown RBP-0.92□□□□□ -2.56
SPG3YDR504C COT1P32798 439 aa-0.92□□□□□ -2.56
SPG3YDR504C BUD27P43573 796 aaKnown RBP RIP-Chip data-0.92□□□□□ -2.56not detected
SPG3YDR504C ERV29P53337 310 aa-0.92□□□□□ -2.56
SPG3YDR504C FLO9P39712 1322 aa-0.92□□□□□ -2.56
SPG3YDR504C AQY2P0CD90 149 aa-0.93□□□□□ -2.56
SPG3YDR504C HMX1P32339 317 aa-0.93□□□□□ -2.56
SPG3YDR504C MDL1P33310 695 aa-0.93□□□□□ -2.56
SPG3YDR504C POP8P38208 133 aa-0.93□□□□□ -2.56
SPG3YDR504C SHQ1P40486 507 aaPredicted RBP-0.93□□□□□ -2.56
SPG3YDR504C SNX41Q04053 625 aa-0.93□□□□□ -2.56
SPG3YDR504C YMR310CQ04867 317 aaPredicted RBP-0.93□□□□□ -2.56
SPG3YDR504C YFH1Q07540 174 aa-0.93□□□□□ -2.56
SPG3YDR504C GEP5Q12393 293 aa-0.93□□□□□ -2.56
SPG3YDR504C RAD3P06839 778 aa-0.94□□□□□ -2.56
SPG3YDR504C YHI9P38765 294 aa-0.94□□□□□ -2.56
SPG3YDR504C YFL040WP43562 540 aa-0.94□□□□□ -2.56
SPG3YDR504C TAF6P53040 516 aa-0.94□□□□□ -2.56
SPG3YDR504C SUB1P54000 292 aaKnown RBP-0.94□□□□□ -2.56
SPG3YDR504C QCR8P08525 94 aa-0.95□□□□□ -2.56
SPG3YDR504C MDH3P32419 343 aaKnown RBP RIP-Chip data-0.95□□□□□ -2.56not detected
SPG3YDR504C CSG2P35206 410 aa-0.95□□□□□ -2.56
SPG3YDR504C MCH2P36032 473 aa-0.95□□□□□ -2.56
SPG3YDR504C ARN2P38724 620 aa-0.95□□□□□ -2.56
SPG3YDR504C SEN34P39707 275 aa-0.95□□□□□ -2.56
SPG3YDR504C YDL121CQ07541 149 aa-0.95□□□□□ -2.56
SPG3YDR504C UTP23Q12339 254 aaKnown RBP-0.95□□□□□ -2.56
SPG3YDR504C RPS3P05750 240 aaKnown RBP-0.96□□□□□ -2.56
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms