RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W VPS38Q05919 439 aa3.6□□□□□ -1.83
SPT3YDR392W NMD4Q12129 218 aa3.6□□□□□ -1.83
SPT3YDR392W DDP1Q99321 188 aaKnown RBP3.6□□□□□ -1.83
SPT3YDR392W COX2P00410 251 aa3.59□□□□□ -1.83
SPT3YDR392W CDC8P00572 216 aa3.59□□□□□ -1.83
SPT3YDR392W TAL1P15019 335 aaKnown RBP3.59□□□□□ -1.83
SPT3YDR392W RPN2P32565 945 aaKnown RBP3.59□□□□□ -1.83
SPT3YDR392W YKT6P36015 200 aaKnown RBP3.59□□□□□ -1.83
SPT3YDR392W VBA2P38358 474 aaKnown RBP3.59□□□□□ -1.83
SPT3YDR392W LIN1P38852 340 aaPredicted RBP3.59□□□□□ -1.83
SPT3YDR392W YML6P51998 286 aa3.59□□□□□ -1.83
SPT3YDR392W NSA1P53136 463 aaPredicted RBP3.59□□□□□ -1.83
SPT3YDR392W RHO4Q00246 291 aa3.59□□□□□ -1.83
SPT3YDR392W GOT1Q03554 138 aa3.59□□□□□ -1.83
SPT3YDR392W RCF1Q03713 159 aa3.59□□□□□ -1.83
SPT3YDR392W PLP1Q04004 230 aa3.59□□□□□ -1.83
SPT3YDR392W SFH1Q06168 426 aa3.59□□□□□ -1.83
SPT3YDR392W URA3P03962 267 aa3.58□□□□□ -1.84
SPT3YDR392W ILV2P07342 687 aaKnown RBP3.58□□□□□ -1.84
SPT3YDR392W CDC10P25342 322 aaKnown RBP3.58□□□□□ -1.84
SPT3YDR392W PDB1P32473 366 aaKnown RBP3.58□□□□□ -1.84
SPT3YDR392W SRB4P32569 687 aa3.58□□□□□ -1.84
SPT3YDR392W COS9P36034 407 aa3.58□□□□□ -1.84
SPT3YDR392W SSP120P39931 234 aaKnown RBP3.58□□□□□ -1.84
SPT3YDR392W COG3P40094 801 aa3.58□□□□□ -1.84
SPT3YDR392W MIC19P43594 170 aa3.58□□□□□ -1.84
SPT3YDR392W AIM22P47051 409 aa3.58□□□□□ -1.84
SPT3YDR392W MGR3Q04472 501 aa3.58□□□□□ -1.84
SPT3YDR392W FRE3Q08905 711 aa3.58□□□□□ -1.84
SPT3YDR392W NIP7Q08962 181 aaKnown RBP3.58□□□□□ -1.84
SPT3YDR392W YDL009CQ12210 107 aa3.58□□□□□ -1.84
SPT3YDR392W PDE2P06776 526 aa3.57□□□□□ -1.84
SPT3YDR392W KSS1P14681 368 aa3.57□□□□□ -1.84
SPT3YDR392W HSP26P15992 214 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
SPT3YDR392W FAR1P21268 830 aa3.57□□□□□ -1.84
SPT3YDR392W YCR061WP25639 631 aa3.57□□□□□ -1.84
SPT3YDR392W GDH2P33327 1092 aaKnown RBP3.57□□□□□ -1.84
SPT3YDR392W ZRT3P34240 503 aa3.57□□□□□ -1.84
SPT3YDR392W JNM1P36224 373 aa3.57□□□□□ -1.84
SPT3YDR392W ANS1P38832 159 aa3.57□□□□□ -1.84
SPT3YDR392W SPC72P39723 622 aa3.57□□□□□ -1.84
SPT3YDR392W YER184CP39961 794 aa3.57□□□□□ -1.84
SPT3YDR392W PCL6P40038 420 aa3.57□□□□□ -1.84
SPT3YDR392W MRX1P40050 688 aa3.57□□□□□ -1.84
SPT3YDR392W GPP2P40106 250 aaKnown RBP3.57□□□□□ -1.84
SPT3YDR392W YNL208WP40159 199 aaKnown RBP3.57□□□□□ -1.84
SPT3YDR392W AXL1P40851 1208 aa3.57□□□□□ -1.84
SPT3YDR392W ECM27P47144 725 aa3.57□□□□□ -1.84
SPT3YDR392W SHY1P53266 389 aa3.57□□□□□ -1.84
SPT3YDR392W YNL140CP53910 189 aa3.57□□□□□ -1.84
SPT3YDR392W URH1Q04179 340 aa3.57□□□□□ -1.84
SPT3YDR392W SPC24Q04477 213 aa3.57□□□□□ -1.84
SPT3YDR392W SWF1Q04629 336 aa3.57□□□□□ -1.84
SPT3YDR392W GPN2Q08726 347 aaPredicted RBP3.57□□□□□ -1.84
SPT3YDR392W SLF1Q12034 447 aaKnown RBP3.57□□□□□ -1.84
SPT3YDR392W YMR230W-AQ3E7B5 62 aa3.57□□□□□ -1.84
SPT3YDR392W RPB8P20436 146 aa3.56□□□□□ -1.84
SPT3YDR392W GSH1P32477 678 aa3.56□□□□□ -1.84
SPT3YDR392W UTR5P32630 166 aa3.56□□□□□ -1.84
SPT3YDR392W RIB7P33312 244 aa3.56□□□□□ -1.84
SPT3YDR392W YOR062CP36025 268 aa3.56□□□□□ -1.84
SPT3YDR392W FZO1P38297 855 aa3.56□□□□□ -1.84
SPT3YDR392W SDS24P38314 527 aa3.56□□□□□ -1.84
SPT3YDR392W ARO9P38840 513 aaPredicted RBP3.56□□□□□ -1.84
SPT3YDR392W SMK1P41808 388 aa3.56□□□□□ -1.84
SPT3YDR392W CAB4P53332 305 aa3.56□□□□□ -1.84
SPT3YDR392W ARP10Q04549 284 aa3.56□□□□□ -1.84
SPT3YDR392W ATG17Q06410 417 aa3.56□□□□□ -1.84
SPT3YDR392W PWP1P21304 576 aaKnown RBP3.55□□□□□ -1.84
SPT3YDR392W RNA14P25298 677 aaKnown RBP3.55□□□□□ -1.84
SPT3YDR392W HIS2P38635 335 aa3.55□□□□□ -1.84
SPT3YDR392W SCS2P40075 244 aaKnown RBP3.55□□□□□ -1.84
SPT3YDR392W QRI7P43122 407 aa3.55□□□□□ -1.84
SPT3YDR392W YJR154WP47181 346 aa3.55□□□□□ -1.84
SPT3YDR392W RBL2P48606 106 aaKnown RBP3.55□□□□□ -1.84
SPT3YDR392W YNR071CP53757 342 aa3.55□□□□□ -1.84
SPT3YDR392W DIG1Q03063 452 aaKnown RBP3.55□□□□□ -1.84
SPT3YDR392W FMP42Q04991 504 aa3.55□□□□□ -1.84
SPT3YDR392W YLR108CQ12259 485 aa3.55□□□□□ -1.84
SPT3YDR392W RPL42AP0CX27 106 aaKnown RBP3.54□□□□□ -1.84
SPT3YDR392W RPL42BP0CX28 106 aaKnown RBP3.54□□□□□ -1.84
SPT3YDR392W YBL029WP38201 376 aa3.54□□□□□ -1.84
SPT3YDR392W YHR180WP38868 163 aa3.54□□□□□ -1.84
SPT3YDR392W YND1P40009 630 aa3.54□□□□□ -1.84
SPT3YDR392W ARB1P40024 610 aaKnown RBP3.54□□□□□ -1.84
SPT3YDR392W YEN1P40028 759 aa3.54□□□□□ -1.84
SPT3YDR392W YFL067WP43537 175 aa3.54□□□□□ -1.84
SPT3YDR392W NHP10Q03435 203 aa3.54□□□□□ -1.84
SPT3YDR392W INP1Q03694 420 aa3.54□□□□□ -1.84
SPT3YDR392W YML108WQ03759 105 aa3.54□□□□□ -1.84
SPT3YDR392W YLR287CQ05881 355 aa3.54□□□□□ -1.84
SPT3YDR392W IRC19Q07843 230 aa3.54□□□□□ -1.84
SPT3YDR392W VIK1Q12045 647 aa3.54□□□□□ -1.84
SPT3YDR392W GET4Q12125 312 aa3.54□□□□□ -1.84
SPT3YDR392W MSH5Q12175 901 aa3.54□□□□□ -1.84
SPT3YDR392W IZH2Q12442 317 aa3.54□□□□□ -1.84
SPT3YDR392W AVL9Q12500 764 aa3.54□□□□□ -1.84
SPT3YDR392W SPO16P17122 198 aa3.53□□□□□ -1.84
SPT3YDR392W PHO13P19881 312 aa3.53□□□□□ -1.84
SPT3YDR392W TOM40P23644 387 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms