RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP42	YDR192C	SOR1	P35497	357 aa	Known RBP	4.14	□□□□□ -1.75
NUP42	YDR192C	KKQ8	P36004	724 aa		4.14	□□□□□ -1.75
NUP42	YDR192C	MRPL37	P36532	105 aa		4.14	□□□□□ -1.75
NUP42	YDR192C	TAE1	P38340	232 aa		4.14	□□□□□ -1.75
NUP42	YDR192C	DED81	P38707	554 aa	Known RBP	4.14	□□□□□ -1.75
NUP42	YDR192C	LYS1	P38998	373 aa	RIP-Chip data	4.14	□□□□□ -1.75	not detected
NUP42	YDR192C	PCF11	P39081	626 aa	Predicted RBP	4.14	□□□□□ -1.75
NUP42	YDR192C	YJL213W	P40896	331 aa		4.14	□□□□□ -1.75
NUP42	YDR192C	YGR201C	P42936	225 aa		4.14	□□□□□ -1.75
NUP42	YDR192C	PAC10	P48363	199 aa		4.14	□□□□□ -1.75
NUP42	YDR192C	ROG1	P53118	685 aa		4.14	□□□□□ -1.75
NUP42	YDR192C	POP6	P53218	158 aa		4.14	□□□□□ -1.75
NUP42	YDR192C	AQR1	P53943	586 aa		4.14	□□□□□ -1.75
NUP42	YDR192C	RHO3	Q00245	231 aa	Known RBP	4.14	□□□□□ -1.75
NUP42	YDR192C	KRE28	Q04431	385 aa		4.14	□□□□□ -1.75
NUP42	YDR192C	YMR317W	Q04893	1140 aa		4.14	□□□□□ -1.75
NUP42	YDR192C	SPO77	Q06134	477 aa		4.14	□□□□□ -1.75
NUP42	YDR192C	GPI11	Q06636	219 aa		4.14	□□□□□ -1.75
NUP42	YDR192C	ASA1	Q06822	443 aa		4.14	□□□□□ -1.75
NUP42	YDR192C	SOR2	Q07786	357 aa		4.14	□□□□□ -1.75
NUP42	YDR192C	YPL245W	Q12179	454 aa	Known RBP	4.14	□□□□□ -1.75
NUP42	YDR192C	AYT1	Q12226	474 aa		4.14	□□□□□ -1.75
NUP42	YDR192C	PST1	Q12355	444 aa		4.14	□□□□□ -1.75
NUP42	YDR192C	YDL199C	Q12407	687 aa		4.14	□□□□□ -1.75
NUP42	YDR192C	UNG1	P12887	359 aa		4.13	□□□□□ -1.75
NUP42	YDR192C	RRP7	P25368	297 aa	Predicted RBP	4.13	□□□□□ -1.75
NUP42	YDR192C	TRX3	P25372	127 aa		4.13	□□□□□ -1.75
NUP42	YDR192C	GLC7	P32598	312 aa	Known RBP	4.13	□□□□□ -1.75
NUP42	YDR192C	MRPL6	P32904	214 aa		4.13	□□□□□ -1.75
NUP42	YDR192C	YKR015C	P36111	568 aa		4.13	□□□□□ -1.75
NUP42	YDR192C	BAT1	P38891	393 aa	Known RBP	4.13	□□□□□ -1.75
NUP42	YDR192C	MTW1	P39731	289 aa		4.13	□□□□□ -1.75
NUP42	YDR192C	RPR2	P40571	144 aa		4.13	□□□□□ -1.75
NUP42	YDR192C	HMS2	P47175	358 aa		4.13	□□□□□ -1.75
NUP42	YDR192C	RPS12	P48589	143 aa	Known RBP	4.13	□□□□□ -1.75
NUP42	YDR192C	YGR168C	P53293	376 aa		4.13	□□□□□ -1.75
NUP42	YDR192C	OCA2	P53949	197 aa		4.13	□□□□□ -1.75
NUP42	YDR192C	GIP3	Q03016	1276 aa		4.13	□□□□□ -1.75
NUP42	YDR192C	YOL131W	Q08270	108 aa		4.13	□□□□□ -1.75
NUP42	YDR192C	YPL199C	Q08954	240 aa		4.13	□□□□□ -1.75
NUP42	YDR192C	SLF1	Q12034	447 aa	Known RBP	4.13	□□□□□ -1.75
NUP42	YDR192C	SRO7	Q12038	1033 aa		4.13	□□□□□ -1.75
NUP42	YDR192C	GLE1	Q12315	538 aa		4.13	□□□□□ -1.75
NUP42	YDR192C	IES3	Q12345	250 aa		4.13	□□□□□ -1.75
NUP42	YDR192C	SNF8	Q12483	233 aa		4.13	□□□□□ -1.75
NUP42	YDR192C	MHF1	Q3E835	90 aa		4.13	□□□□□ -1.75
NUP42	YDR192C	IRA1	P18963	3092 aa		4.13	□□□□□ -1.75
NUP42	YDR192C	DAP2	P18962	818 aa		4.12	□□□□□ -1.75
NUP42	YDR192C	RPS1B	P23248	255 aa	Known RBP	4.12	□□□□□ -1.75
NUP42	YDR192C	LSB5	P25369	354 aa		4.12	□□□□□ -1.75
NUP42	YDR192C	YCR022C	P25620	114 aa		4.12	□□□□□ -1.75
NUP42	YDR192C	TIP1	P27654	210 aa	Predicted RBP	4.12	□□□□□ -1.75
NUP42	YDR192C	MGM101	P32787	269 aa	Known RBP	4.12	□□□□□ -1.75
NUP42	YDR192C	RIB1	P38066	345 aa		4.12	□□□□□ -1.75
NUP42	YDR192C	ZTA1	P38230	334 aa	Known RBP	4.12	□□□□□ -1.75
NUP42	YDR192C	PEX18	P38855	283 aa		4.12	□□□□□ -1.75
NUP42	YDR192C	ATG7	P38862	630 aa		4.12	□□□□□ -1.75
NUP42	YDR192C	PAC11	P40960	533 aa		4.12	□□□□□ -1.75
NUP42	YDR192C	HOC1	P47124	396 aa		4.12	□□□□□ -1.75
NUP42	YDR192C	TIS11	P47977	285 aa		4.12	□□□□□ -1.75
NUP42	YDR192C	YDL186W	P48568	277 aa		4.12	□□□□□ -1.75
NUP42	YDR192C	AVT4	P50944	713 aa		4.12	□□□□□ -1.75
NUP42	YDR192C	SHE4	P51534	789 aa		4.12	□□□□□ -1.75
NUP42	YDR192C	COS10	P52924	374 aa		4.12	□□□□□ -1.75
NUP42	YDR192C	RMR1	P53060	241 aa		4.12	□□□□□ -1.75
NUP42	YDR192C	YNR048W	P53740	393 aa		4.12	□□□□□ -1.75
NUP42	YDR192C	COG5	P53951	403 aa		4.12	□□□□□ -1.75
NUP42	YDR192C	TRM82	Q03774	444 aa		4.12	□□□□□ -1.75
NUP42	YDR192C	LOT6	Q07923	191 aa		4.12	□□□□□ -1.75
NUP42	YDR192C	SKI7	Q08491	747 aa	Predicted RBP	4.12	□□□□□ -1.75
NUP42	YDR192C	TIM18	Q08749	192 aa		4.12	□□□□□ -1.75
NUP42	YDR192C	YOR114W	Q12219	294 aa		4.12	□□□□□ -1.75
NUP42	YDR192C	PDE2	P06776	526 aa		4.11	□□□□□ -1.75
NUP42	YDR192C	CTR86	P25355	563 aa		4.11	□□□□□ -1.75
NUP42	YDR192C	NTG1	P31378	399 aa		4.11	□□□□□ -1.75
NUP42	YDR192C	VMA6	P32366	345 aa	Known RBP	4.11	□□□□□ -1.75
NUP42	YDR192C	SEC17	P32602	292 aa		4.11	□□□□□ -1.75
NUP42	YDR192C	DOA1	P36037	715 aa		4.11	□□□□□ -1.75
NUP42	YDR192C	SOL2	P37262	315 aa		4.11	□□□□□ -1.75
NUP42	YDR192C	TIM17	P39515	158 aa		4.11	□□□□□ -1.75
NUP42	YDR192C	MST28	P39552	234 aa		4.11	□□□□□ -1.75
NUP42	YDR192C	SER3	P40054	469 aa		4.11	□□□□□ -1.75
NUP42	YDR192C	DDI1	P40087	428 aa		4.11	□□□□□ -1.75
NUP42	YDR192C	NBP35	P52920	328 aa		4.11	□□□□□ -1.75
NUP42	YDR192C	GPI15	P53961	229 aa		4.11	□□□□□ -1.75
NUP42	YDR192C	PEX25	Q02969	394 aa		4.11	□□□□□ -1.75
NUP42	YDR192C	PRP3	Q03338	469 aa	Predicted RBP	4.11	□□□□□ -1.75
NUP42	YDR192C	RSN1	Q03516	953 aa		4.11	□□□□□ -1.75
NUP42	YDR192C	BOP2	Q06150	570 aa		4.11	□□□□□ -1.75
NUP42	YDR192C	FDH1	Q08911	376 aa		4.11	□□□□□ -1.75
NUP42	YDR192C	YOR342C	Q12182	319 aa		4.11	□□□□□ -1.75
NUP42	YDR192C	MED11	Q99278	115 aa		4.11	□□□□□ -1.75
NUP42	YDR192C	BEM2	P39960	2167 aa	Known RBP	4.11	□□□□□ -1.75
NUP42	YDR192C	REP1	P03871	373 aa		4.1	□□□□□ -1.75
NUP42	YDR192C	ZWF1	P11412	505 aa	Known RBP	4.1	□□□□□ -1.75
NUP42	YDR192C	MER1	P16523	270 aa		4.1	□□□□□ -1.75
NUP42	YDR192C	MCK1	P21965	375 aa	Known RBP	4.1	□□□□□ -1.75
NUP42	YDR192C	PPH21	P23594	369 aa		4.1	□□□□□ -1.75
NUP42	YDR192C	MEI5	P32489	222 aa		4.1	□□□□□ -1.75
NUP42	YDR192C	UTP11	P34247	250 aa	Predicted RBP	4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms