RNA–Protein interactions for RNA: YDL191W

RPL35A, Transcript of Ribosomal 60S subunit protein L35A, yeast

Gene RPL35A, Length 363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL35A	YDL191W	YPL247C	Q12523	523 aa		0.63	□□□□□ -2.31
RPL35A	YDL191W	NBL1	Q3E7Y6	73 aa		0.63	□□□□□ -2.31
RPL35A	YDL191W	ATG15	P25641	520 aa		0.62	□□□□□ -2.31
RPL35A	YDL191W	SPT8	P38915	602 aa		0.62	□□□□□ -2.31
RPL35A	YDL191W	RPL10	P41805	221 aa	Known RBP	0.62	□□□□□ -2.31
RPL35A	YDL191W	RPE1	P46969	238 aa		0.62	□□□□□ -2.31
RPL35A	YDL191W	YGL114W	P53134	725 aa		0.62	□□□□□ -2.31
RPL35A	YDL191W	CAB4	P53332	305 aa		0.62	□□□□□ -2.31
RPL35A	YDL191W	YNL143C	P53908	130 aa		0.62	□□□□□ -2.31
RPL35A	YDL191W	MRS2	Q01926	470 aa		0.62	□□□□□ -2.31
RPL35A	YDL191W	BUR2	Q05949	395 aa		0.62	□□□□□ -2.31
RPL35A	YDL191W	YDR262W	Q12331	272 aa		0.62	□□□□□ -2.31
RPL35A	YDL191W	SPO24	Q3E752	67 aa		0.62	□□□□□ -2.31
RPL35A	YDL191W	TOM40	P23644	387 aa	Known RBP	0.61	□□□□□ -2.31
RPL35A	YDL191W	BMH1	P29311	267 aa	Known RBP	0.61	□□□□□ -2.31
RPL35A	YDL191W	VPH1	P32563	840 aa	Known RBP	0.61	□□□□□ -2.31
RPL35A	YDL191W	DOA4	P32571	926 aa		0.61	□□□□□ -2.31
RPL35A	YDL191W	YJL118W	P47022	219 aa		0.61	□□□□□ -2.31
RPL35A	YDL191W	PUT1	P09368	476 aa		0.6	□□□□□ -2.31
RPL35A	YDL191W	CAT2	P32796	670 aa	Known RBP	0.6	□□□□□ -2.31
RPL35A	YDL191W	ZRT1	P32804	376 aa		0.6	□□□□□ -2.31
RPL35A	YDL191W	IMP3	P32899	183 aa	Predicted RBP	0.6	□□□□□ -2.31
RPL35A	YDL191W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	0.6	□□□□□ -2.31	not detected
RPL35A	YDL191W	PHO89	P38361	574 aa		0.6	□□□□□ -2.31
RPL35A	YDL191W	YDR089W	P38966	869 aa		0.6	□□□□□ -2.31
RPL35A	YDL191W	TIF34	P40217	347 aa	Known RBP	0.6	□□□□□ -2.31
RPL35A	YDL191W	YGR168C	P53293	376 aa		0.6	□□□□□ -2.31
RPL35A	YDL191W	EOS1	P53938	366 aa		0.6	□□□□□ -2.31
RPL35A	YDL191W	RAD7	P06779	565 aa		0.59	□□□□□ -2.31
RPL35A	YDL191W	SGA1	P08019	549 aa		0.59	□□□□□ -2.31
RPL35A	YDL191W	YOL162W	P0CF19	215 aa		0.59	□□□□□ -2.31
RPL35A	YDL191W	ERG2	P32352	222 aa		0.59	□□□□□ -2.31
RPL35A	YDL191W	KRE6	P32486	720 aa		0.59	□□□□□ -2.31
RPL35A	YDL191W	SCM4	P32564	187 aa		0.59	□□□□□ -2.31
RPL35A	YDL191W	SFC1	P33303	322 aa		0.59	□□□□□ -2.31
RPL35A	YDL191W	YHI9	P38765	294 aa		0.59	□□□□□ -2.31
RPL35A	YDL191W	YER135C	P40082	130 aa		0.59	□□□□□ -2.31
RPL35A	YDL191W	PEP8	P40335	379 aa		0.59	□□□□□ -2.31
RPL35A	YDL191W	UBC13	P52490	153 aa		0.59	□□□□□ -2.31
RPL35A	YDL191W	SWC4	P53201	476 aa		0.59	□□□□□ -2.31
RPL35A	YDL191W	RSC1	P53236	928 aa		0.59	□□□□□ -2.31
RPL35A	YDL191W	STE23	Q06010	1027 aa		0.59	□□□□□ -2.31
RPL35A	YDL191W	NOT5	Q12514	560 aa	Predicted RBP	0.59	□□□□□ -2.31
RPL35A	YDL191W	CDC7	P06243	507 aa		0.58	□□□□□ -2.32
RPL35A	YDL191W	AEP1	P32493	518 aa		0.58	□□□□□ -2.32
RPL35A	YDL191W	YPC1	P38298	316 aa		0.58	□□□□□ -2.32
RPL35A	YDL191W	AVT7	P40501	490 aa		0.58	□□□□□ -2.32
RPL35A	YDL191W	INA22	P40576	216 aa		0.58	□□□□□ -2.32
RPL35A	YDL191W	GON7	P46984	123 aa		0.58	□□□□□ -2.32
RPL35A	YDL191W	DAD3	P69850	94 aa		0.58	□□□□□ -2.32
RPL35A	YDL191W	CAB5	Q03941	241 aa		0.58	□□□□□ -2.32
RPL35A	YDL191W	YMR114C	Q04471	368 aa	Known RBP	0.58	□□□□□ -2.32
RPL35A	YDL191W	ECM18	Q04623	453 aa		0.58	□□□□□ -2.32
RPL35A	YDL191W	YOL019W	Q08157	551 aa		0.58	□□□□□ -2.32
RPL35A	YDL191W	YBL112C	Q3E7Y4	105 aa		0.58	□□□□□ -2.32
RPL35A	YDL191W	COT1	P32798	439 aa		0.57	□□□□□ -2.32
RPL35A	YDL191W	DRE2	P36152	348 aa		0.57	□□□□□ -2.32
RPL35A	YDL191W	ADH5	P38113	351 aa	Known RBP	0.57	□□□□□ -2.32
RPL35A	YDL191W	DSE2	P38844	325 aa		0.57	□□□□□ -2.32
RPL35A	YDL191W	SEN34	P39707	275 aa		0.57	□□□□□ -2.32
RPL35A	YDL191W	JEM1	P40358	645 aa		0.57	□□□□□ -2.32
RPL35A	YDL191W	SHQ1	P40486	507 aa	Predicted RBP	0.57	□□□□□ -2.32
RPL35A	YDL191W	OKP1	P53298	406 aa		0.57	□□□□□ -2.32
RPL35A	YDL191W	RRP42	Q12277	265 aa	Predicted RBP	0.57	□□□□□ -2.32
RPL35A	YDL191W	IZH4	Q99393	312 aa		0.57	□□□□□ -2.32
RPL35A	YDL191W	POP8	P38208	133 aa		0.56	□□□□□ -2.32
RPL35A	YDL191W	YPL039W	Q03080	316 aa		0.56	□□□□□ -2.32
RPL35A	YDL191W	SMT3	Q12306	101 aa	Known RBP	0.56	□□□□□ -2.32
RPL35A	YDL191W	RPL18A	P0CX49	186 aa	Known RBP	0.55	□□□□□ -2.32
RPL35A	YDL191W	RPL18B	P0CX50	186 aa	Known RBP	0.55	□□□□□ -2.32
RPL35A	YDL191W	TAL1	P15019	335 aa	Known RBP	0.55	□□□□□ -2.32
RPL35A	YDL191W	MPP10	P47083	593 aa	Known RBP	0.55	□□□□□ -2.32
RPL35A	YDL191W	NUP57	P48837	541 aa		0.55	□□□□□ -2.32
RPL35A	YDL191W	YPT32	P51996	222 aa	Known RBP	0.55	□□□□□ -2.32
RPL35A	YDL191W	MZM1	Q03429	123 aa	Predicted RBP	0.55	□□□□□ -2.32
RPL35A	YDL191W	PEX12	Q04370	399 aa		0.55	□□□□□ -2.32
RPL35A	YDL191W	DBP9	Q06218	594 aa	Known RBP	0.55	□□□□□ -2.32
RPL35A	YDL191W	FRE6	Q12473	712 aa		0.55	□□□□□ -2.32
RPL35A	YDL191W	YPR064W	Q12492	139 aa		0.55	□□□□□ -2.32
RPL35A	YDL191W	RNR2	P09938	399 aa	Known RBP	0.54	□□□□□ -2.32
RPL35A	YDL191W	RPL31A	P0C2H8	113 aa	Known RBP	0.54	□□□□□ -2.32
RPL35A	YDL191W	CSG2	P35206	410 aa		0.54	□□□□□ -2.32
RPL35A	YDL191W	YKR045C	P36138	183 aa		0.54	□□□□□ -2.32
RPL35A	YDL191W	SNX4	P47057	423 aa		0.54	□□□□□ -2.32
RPL35A	YDL191W	TAD2	P47058	250 aa		0.54	□□□□□ -2.32
RPL35A	YDL191W	NUP49	Q02199	472 aa		0.54	□□□□□ -2.32
RPL35A	YDL191W	PRM15	Q03262	622 aa		0.54	□□□□□ -2.32
RPL35A	YDL191W	YML018C	Q03730	393 aa		0.54	□□□□□ -2.32
RPL35A	YDL191W	SAM4	Q08985	325 aa	Known RBP	0.54	□□□□□ -2.32
RPL35A	YDL191W	YPR1	Q12458	312 aa		0.54	□□□□□ -2.32
RPL35A	YDL191W	RAD3	P06839	778 aa		0.53	□□□□□ -2.32
RPL35A	YDL191W	CCA1	P21269	546 aa		0.53	□□□□□ -2.32
RPL35A	YDL191W	DPB2	P24482	689 aa	Predicted RBP	0.53	□□□□□ -2.32
RPL35A	YDL191W	GDH2	P33327	1092 aa	Known RBP	0.53	□□□□□ -2.32
RPL35A	YDL191W	YKL162C	P36052	402 aa		0.53	□□□□□ -2.32
RPL35A	YDL191W	RXT2	P38255	430 aa		0.53	□□□□□ -2.32
RPL35A	YDL191W	YHB1	P39676	399 aa	Known RBP	0.53	□□□□□ -2.32
RPL35A	YDL191W	GDS1	P41913	522 aa		0.53	□□□□□ -2.32
RPL35A	YDL191W	CIS3	P47001	227 aa		0.53	□□□□□ -2.32
RPL35A	YDL191W	CUE3	P53137	624 aa	Known RBP	0.53	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms