RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W TUS1Q06412 1307 aa3.89□□□□□ -1.79
CKS1YBR135W VPS13Q07878 3144 aa3.88□□□□□ -1.79
CKS1YBR135W CTA1P15202 515 aa3.88□□□□□ -1.79
CKS1YBR135W HSP26P15992 214 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
CKS1YBR135W PCL1P24867 279 aa3.88□□□□□ -1.79
CKS1YBR135W RPC25P35718 212 aa3.88□□□□□ -1.79
CKS1YBR135W YBR241CP38142 488 aa3.88□□□□□ -1.79
CKS1YBR135W GPI18P38211 433 aa3.88□□□□□ -1.79
CKS1YBR135W PHO88P38264 188 aaPredicted RBP3.88□□□□□ -1.79
CKS1YBR135W DSE1P40077 573 aa3.88□□□□□ -1.79
CKS1YBR135W BIO4P53630 237 aa3.88□□□□□ -1.79
CKS1YBR135W HAL1Q01766 294 aa3.88□□□□□ -1.79
CKS1YBR135W YDR115WQ04598 105 aa3.88□□□□□ -1.79
CKS1YBR135W URA10P30402 227 aa3.87□□□□□ -1.79
CKS1YBR135W PDC2P32896 925 aa3.87□□□□□ -1.79
CKS1YBR135W YKT6P36015 200 aaKnown RBP3.87□□□□□ -1.79
CKS1YBR135W SHE3P38272 425 aaKnown RBP3.87□□□□□ -1.79
CKS1YBR135W PEX22P39718 180 aa3.87□□□□□ -1.79
CKS1YBR135W COX16P47081 118 aa3.87□□□□□ -1.79
CKS1YBR135W GIM3P53900 129 aa3.87□□□□□ -1.79
CKS1YBR135W MRPS16Q02608 121 aa3.87□□□□□ -1.79
CKS1YBR135W YPL080CQ02826 108 aa3.87□□□□□ -1.79
CKS1YBR135W SMD2Q06217 110 aaKnown RBP3.87□□□□□ -1.79
CKS1YBR135W MRPL23Q12487 163 aaPredicted RBP3.87□□□□□ -1.79
CKS1YBR135W RPL21BQ12672 160 aaKnown RBP3.87□□□□□ -1.79
CKS1YBR135W ECM29P38737 1868 aa3.87□□□□□ -1.79
CKS1YBR135W YKL071WP36086 256 aa3.86□□□□□ -1.79
CKS1YBR135W MRPL27P36526 146 aaPredicted RBP3.86□□□□□ -1.79
CKS1YBR135W YHR035WP38769 630 aa3.86□□□□□ -1.79
CKS1YBR135W YPS5P53057 165 aa3.86□□□□□ -1.79
CKS1YBR135W YGL185CP53100 379 aa3.86□□□□□ -1.79
CKS1YBR135W KAP95Q06142 861 aaKnown RBP3.86□□□□□ -1.79
CKS1YBR135W RRT8Q08219 342 aa3.86□□□□□ -1.79
CKS1YBR135W LDB17Q12342 491 aa3.86□□□□□ -1.79
CKS1YBR135W PRM4Q12498 284 aa3.86□□□□□ -1.79
CKS1YBR135W FOL3Q12676 427 aaPredicted RBP3.86□□□□□ -1.79
CKS1YBR135W YPR117WQ06116 2489 aa3.86□□□□□ -1.79
CKS1YBR135W STE2D6VTK4 431 aa3.85□□□□□ -1.79
CKS1YBR135W SPS100P13130 326 aa3.85□□□□□ -1.79
CKS1YBR135W MAK31P23059 88 aa3.85□□□□□ -1.79
CKS1YBR135W ZRT1P32804 376 aa3.85□□□□□ -1.79
CKS1YBR135W KTI12P34253 313 aaKnown RBP3.85□□□□□ -1.79
CKS1YBR135W UTH1P36135 365 aa3.85□□□□□ -1.79
CKS1YBR135W STB1P42845 420 aa3.85□□□□□ -1.79
CKS1YBR135W LIA1P47120 325 aaKnown RBP3.85□□□□□ -1.79
CKS1YBR135W GTO1P48239 356 aa3.85□□□□□ -1.79
CKS1YBR135W TPC1P53257 314 aa3.85□□□□□ -1.79
CKS1YBR135W RMI1Q02685 241 aa3.85□□□□□ -1.79
CKS1YBR135W INP2Q03824 705 aa3.85□□□□□ -1.79
CKS1YBR135W MRX9Q07349 420 aaKnown RBP3.85□□□□□ -1.79
CKS1YBR135W YPQ1Q12010 308 aa3.85□□□□□ -1.79
CKS1YBR135W APC9Q12107 265 aa3.85□□□□□ -1.79
CKS1YBR135W SIA1Q12212 622 aa3.85□□□□□ -1.79
CKS1YBR135W ADF1Q2V2Q1 113 aa3.85□□□□□ -1.79
CKS1YBR135W RAD7P06779 565 aa3.84□□□□□ -1.79
CKS1YBR135W GPI12P23797 304 aa3.84□□□□□ -1.79
CKS1YBR135W MEK1P24719 497 aaPredicted RBP3.84□□□□□ -1.79
CKS1YBR135W DOA4P32571 926 aa3.84□□□□□ -1.79
CKS1YBR135W ECT1P33412 323 aa3.84□□□□□ -1.79
CKS1YBR135W RCK1P38622 512 aa3.84□□□□□ -1.79
CKS1YBR135W LIF1P53150 421 aa3.84□□□□□ -1.79
CKS1YBR135W YNL260CP53846 198 aa3.84□□□□□ -1.79
CKS1YBR135W MRX11Q03079 207 aa3.84□□□□□ -1.79
CKS1YBR135W MYO5Q04439 1219 aaKnown RBP3.84□□□□□ -1.79
CKS1YBR135W BCP1Q06338 283 aa3.84□□□□□ -1.79
CKS1YBR135W PBP4Q07362 185 aaKnown RBP3.84□□□□□ -1.79
CKS1YBR135W DTD1Q07648 150 aaKnown RBP3.84□□□□□ -1.79
CKS1YBR135W SRO7Q12038 1033 aa3.84□□□□□ -1.79
CKS1YBR135W POX1P13711 748 aa3.83□□□□□ -1.8
CKS1YBR135W SNA3P14359 133 aa3.83□□□□□ -1.8
CKS1YBR135W BGL2P15703 313 aaKnown RBP3.83□□□□□ -1.8
CKS1YBR135W KRE6P32486 720 aa3.83□□□□□ -1.8
CKS1YBR135W YKL070WP36087 169 aa3.83□□□□□ -1.8
CKS1YBR135W YMR262WP38430 313 aa3.83□□□□□ -1.8
CKS1YBR135W YGL262WP53054 175 aa3.83□□□□□ -1.8
CKS1YBR135W HOP2P53187 214 aa3.83□□□□□ -1.8
CKS1YBR135W TPS1Q00764 495 aaKnown RBP3.83□□□□□ -1.8
CKS1YBR135W SNX41Q04053 625 aa3.83□□□□□ -1.8
CKS1YBR135W SUE1Q06524 206 aa3.83□□□□□ -1.8
CKS1YBR135W MMT2Q08970 484 aa3.83□□□□□ -1.8
CKS1YBR135W ERP3Q12403 225 aa3.83□□□□□ -1.8
CKS1YBR135W CBP6P07253 162 aaPredicted RBP3.82□□□□□ -1.8
CKS1YBR135W ASP3-2P0CX77 362 aa3.82□□□□□ -1.8
CKS1YBR135W ASP3-3P0CX78 362 aa3.82□□□□□ -1.8
CKS1YBR135W ASP3-4P0CX79 362 aa3.82□□□□□ -1.8
CKS1YBR135W ASP3-1P0CZ17 362 aa3.82□□□□□ -1.8
CKS1YBR135W VPS3P23643 1011 aa3.82□□□□□ -1.8
CKS1YBR135W CBF5P33322 483 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8 RIP-Chip
CKS1YBR135W SWD2P36104 329 aaPredicted RBP3.82□□□□□ -1.8
CKS1YBR135W EFM1P38732 585 aa3.82□□□□□ -1.8
CKS1YBR135W SOP4P39543 234 aaPredicted RBP3.82□□□□□ -1.8
CKS1YBR135W EMC2P47133 292 aaKnown RBP3.82□□□□□ -1.8
CKS1YBR135W MND1P53102 219 aa3.82□□□□□ -1.8
CKS1YBR135W NRM1P53718 249 aa3.82□□□□□ -1.8
CKS1YBR135W KTR6P54070 446 aa3.82□□□□□ -1.8
CKS1YBR135W SNZ1Q03148 297 aa3.82□□□□□ -1.8
CKS1YBR135W ADD37Q03233 198 aa3.82□□□□□ -1.8
CKS1YBR135W TDH1P00360 332 aaKnown RBP3.81□□□□□ -1.8
CKS1YBR135W SOD1P00445 154 aaKnown RBP3.81□□□□□ -1.8
CKS1YBR135W RME1P32338 300 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 52 ms