RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 CHCHD3Q9NX63 227 aaKnown RBP12.47□□□□□ -0.41
SHPRH-211ENST00000629427 AGO2Q9UKV8 859 aaKnown RBP12.47□□□□□ -0.41
SHPRH-211ENST00000629427 ROBO2Q9HCK4 1378 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 SKIP12755 728 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 BLVRAP53004 296 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 TADA2BQ86TJ2 420 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 ENAHQ8N8S7 591 aaPredicted RBP12.47□□□□□ -0.41
SHPRH-211ENST00000629427 FBXL5Q9UKA1 691 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 EN1Q05925 392 aaPredicted RBP12.47□□□□□ -0.41
SHPRH-211ENST00000629427 RRM2BQ7LG56 351 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 CALR3Q96L12 384 aaKnown RBP12.47□□□□□ -0.41
SHPRH-211ENST00000629427 LRRC37BQ96QE4 947 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 CENPKQ9BS16 269 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 KDM4CQ9H3R0 1056 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 AIPL1Q9NZN9 384 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 LAMC1P11047 1609 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 IQCA1LA6NCM1 817 aa12.46□□□□□ -0.41
SHPRH-211ENST00000629427 PYGBP11216 843 aa12.46□□□□□ -0.41
SHPRH-211ENST00000629427 TMED1Q13445 227 aa12.46□□□□□ -0.41
SHPRH-211ENST00000629427 ELP3Q9H9T3 547 aa12.46□□□□□ -0.41
SHPRH-211ENST00000629427 ABHD10Q9NUJ1 306 aa12.46□□□□□ -0.41
SHPRH-211ENST00000629427 QRICH2Q9H0J4 1663 aa12.46□□□□□ -0.41
SHPRH-211ENST00000629427 MFAP3LO75121 409 aa12.46□□□□□ -0.41
SHPRH-211ENST00000629427 SPAG7O75391 227 aa12.46□□□□□ -0.41
SHPRH-211ENST00000629427 PSMC5P62195 406 aa12.46□□□□□ -0.41
SHPRH-211ENST00000629427 DRAP1Q14919 205 aaPredicted RBP12.46□□□□□ -0.41
SHPRH-211ENST00000629427 ABTB1Q969K4 478 aaPredicted RBP12.46□□□□□ -0.41
SHPRH-211ENST00000629427 ZCCHC11Q5TAX3 1644 aaKnown RBP12.46□□□□□ -0.41
SHPRH-211ENST00000629427 ARHGAP10A1A4S6 786 aa12.46□□□□□ -0.41
SHPRH-211ENST00000629427 MAP4P27816 1152 aaKnown RBP12.46□□□□□ -0.41
SHPRH-211ENST00000629427 FASTKD1Q53R41 847 aaKnown RBP12.46□□□□□ -0.41
SHPRH-211ENST00000629427 NAF1Q96HR8 494 aaKnown RBP12.46□□□□□ -0.41
SHPRH-211ENST00000629427 CCDC188H7C350 402 aa12.46□□□□□ -0.41
SHPRH-211ENST00000629427 MMEP08473 750 aa12.46□□□□□ -0.41
SHPRH-211ENST00000629427 DEUP1Q05D60 604 aa12.46□□□□□ -0.41
SHPRH-211ENST00000629427 TBC1D10CQ8IV04 446 aa12.46□□□□□ -0.41
SHPRH-211ENST00000629427 SEL1LQ9UBV2 794 aa12.46□□□□□ -0.41
SHPRH-211ENST00000629427 COPB2P35606 906 aa12.46□□□□□ -0.42
SHPRH-211ENST00000629427 TXNRD1Q16881 649 aa12.46□□□□□ -0.42
SHPRH-211ENST00000629427 ITPRIPL1Q6GPH6 555 aa12.46□□□□□ -0.42
SHPRH-211ENST00000629427 GPD1LQ8N335 351 aa12.46□□□□□ -0.42
SHPRH-211ENST00000629427 PARVAQ9NVD7 372 aa12.46□□□□□ -0.42
SHPRH-211ENST00000629427 CTIFO43310 598 aaKnown RBP12.46□□□□□ -0.42
SHPRH-211ENST00000629427 ATP9BO43861 1147 aa12.46□□□□□ -0.42
SHPRH-211ENST00000629427 ATP1A3P13637 1013 aa12.46□□□□□ -0.42
SHPRH-211ENST00000629427 YWHABP31946 246 aaKnown RBP12.46□□□□□ -0.42
SHPRH-211ENST00000629427 ZNF211Q13398 564 aaPredicted RBP12.46□□□□□ -0.42
SHPRH-211ENST00000629427 NECTIN1Q15223 517 aa12.46□□□□□ -0.42
SHPRH-211ENST00000629427 KLHL38Q2WGJ6 581 aa12.46□□□□□ -0.42
SHPRH-211ENST00000629427 MFN1Q8IWA4 741 aa12.46□□□□□ -0.42
SHPRH-211ENST00000629427 ZNF507Q8TCN5 953 aa12.46□□□□□ -0.42
SHPRH-211ENST00000629427 SRPK1Q96SB4 655 aaKnown RBP12.46□□□□□ -0.42
SHPRH-211ENST00000629427 JPH1Q9HDC5 661 aaPredicted RBP12.46□□□□□ -0.42
SHPRH-211ENST00000629427 SENP1Q9P0U3 644 aa12.46□□□□□ -0.42
SHPRH-211ENST00000629427 ASB14A6NK59 587 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 APOL1O14791 398 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 ZFXP17010 805 aaPredicted RBP12.45□□□□□ -0.42
SHPRH-211ENST00000629427 CAV1Q03135 178 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 MTMR2Q13614 643 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 CASP8Q14790 479 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 RNF149Q8NC42 400 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 CELF1Q92879 486 aaKnown RBP12.45□□□□□ -0.42
SHPRH-211ENST00000629427 CCDC90BQ9GZT6 254 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 LRRC53A6NM62 1247 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 VGLL3A8MV65 326 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 CD2BP2O95400 341 aaKnown RBP12.45□□□□□ -0.42
SHPRH-211ENST00000629427 DAB2P98082 770 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 CDK17Q00537 523 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 WASHC5Q12768 1159 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 GTF2H3Q13889 308 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 KYAT1Q16773 422 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 SH3TC2Q8TF17 1288 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 EXOC4Q96A65 974 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 PPP1R36Q96LQ0 422 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 DDX56Q9NY93 547 aaKnown RBP12.45□□□□□ -0.42
SHPRH-211ENST00000629427 PCDHB8Q9UN66 801 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 MAGI2Q86UL8 1455 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 ZBTB17Q13105 803 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 PPP1R18Q6NYC8 613 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 PPP2R3CQ969Q6 453 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 PGBD4Q96DM1 585 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 MTBPQ96DY7 904 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 LY9Q9HBG7 655 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 BARHL2Q9NY43 387 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 STX18Q9P2W9 335 aaKnown RBP12.45□□□□□ -0.42
SHPRH-211ENST00000629427 PCDHGB4Q9UN71 923 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 PRRG1O14668 218 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 TXNP10599 105 aaKnown RBP12.45□□□□□ -0.42
SHPRH-211ENST00000629427 NT5C2P49902 561 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 ST8SIA6P61647 398 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 RGS9BPQ6ZS82 235 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 TBC1D1Q86TI0 1168 aaPredicted RBP12.45□□□□□ -0.42
SHPRH-211ENST00000629427 MIF4GDA9UHW6 222 aaKnown RBP12.45□□□□□ -0.42
SHPRH-211ENST00000629427 H7C1W4 665 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 IRF1P10914 325 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 CDH6P55285 790 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 BCAR1P56945 870 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 EFHBQ8N7U6 833 aa12.45□□□□□ -0.42
SHPRH-211ENST00000629427 RRP15Q9Y3B9 282 aaKnown RBP12.45□□□□□ -0.42
SHPRH-211ENST00000629427 ATP8B1O43520 1251 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms