RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 CRIPAKQ8N1N5 446 aa22.01■■□□□ 1.11
TOP3A-213ENST00000582230 ACO2Q99798 780 aaKnown RBP22.01■■□□□ 1.11
TOP3A-213ENST00000582230 TARS2Q9BW92 718 aaKnown RBP22.01■■□□□ 1.11
TOP3A-213ENST00000582230 PDZD7Q9H5P4 517 aa22.01■■□□□ 1.11
TOP3A-213ENST00000582230 EXOC7Q9UPT5 735 aa22.01■■□□□ 1.11
TOP3A-213ENST00000582230 TTLL13PA6NNM8 815 aa22■■□□□ 1.11
TOP3A-213ENST00000582230 GJB5O95377 273 aa22■■□□□ 1.11
TOP3A-213ENST00000582230 EDN1P05305 212 aa22■■□□□ 1.11
TOP3A-213ENST00000582230 PNOCQ13519 176 aa22■■□□□ 1.11
TOP3A-213ENST00000582230 KCNB1Q14721 858 aa22■■□□□ 1.11
TOP3A-213ENST00000582230 UBXN11Q5T124 520 aa22■■□□□ 1.11
TOP3A-213ENST00000582230 BICD1Q96G01 975 aa22■■□□□ 1.11
TOP3A-213ENST00000582230 ACCSQ96QU6 501 aa22■■□□□ 1.11
TOP3A-213ENST00000582230 ZBED2Q9BTP6 218 aa22■■□□□ 1.11
TOP3A-213ENST00000582230 TRIM6Q9C030 488 aaPredicted RBP22■■□□□ 1.11
TOP3A-213ENST00000582230 PCDHB2Q9Y5E7 798 aa22■■□□□ 1.11
TOP3A-213ENST00000582230 EIF3DO15371 548 aaKnown RBP eCLIP21.99■■□□□ 1.11
TOP3A-213ENST00000582230 TOM1L1O75674 476 aa21.99■■□□□ 1.11
TOP3A-213ENST00000582230 RHOBTB3O94955 611 aa21.99■■□□□ 1.11
TOP3A-213ENST00000582230 UPP2O95045 317 aa21.99■■□□□ 1.11
TOP3A-213ENST00000582230 PIGRP01833 764 aa21.99■■□□□ 1.11
TOP3A-213ENST00000582230 L1TD1Q5T7N2 865 aaKnown RBP21.99■■□□□ 1.11
TOP3A-213ENST00000582230 HACE1Q8IYU2 909 aa21.99■■□□□ 1.11
TOP3A-213ENST00000582230 HPS3Q969F9 1004 aa21.99■■□□□ 1.11
TOP3A-213ENST00000582230 PGBD4Q96DM1 585 aa21.99■■□□□ 1.11
TOP3A-213ENST00000582230 GSDMAQ96QA5 445 aa21.99■■□□□ 1.11
TOP3A-213ENST00000582230 PTPRHQ9HD43 1115 aa21.99■■□□□ 1.11
TOP3A-213ENST00000582230 RMND1Q9NWS8 449 aa21.99■■□□□ 1.11
TOP3A-213ENST00000582230 USP20Q9Y2K6 914 aa21.99■■□□□ 1.11
TOP3A-213ENST00000582230 HNRNPDLO14979 420 aaKnown RBP21.98■■□□□ 1.11
TOP3A-213ENST00000582230 HOXA2O43364 376 aa21.98■■□□□ 1.11
TOP3A-213ENST00000582230 MYBP10242 640 aa21.98■■□□□ 1.11
TOP3A-213ENST00000582230 MCM4P33991 863 aa21.98■■□□□ 1.11
TOP3A-213ENST00000582230 LIG4P49917 911 aa21.98■■□□□ 1.11
TOP3A-213ENST00000582230 CASP5P51878 434 aa21.98■■□□□ 1.11
TOP3A-213ENST00000582230 SMAD3P84022 425 aaKnown RBP21.98■■□□□ 1.11
TOP3A-213ENST00000582230 DCAF4L1Q3SXM0 396 aa21.98■■□□□ 1.11
TOP3A-213ENST00000582230 EPM2AIP1Q7L775 607 aaPredicted RBP21.98■■□□□ 1.11
TOP3A-213ENST00000582230 MRPL10Q7Z7H8 261 aaKnown RBP21.98■■□□□ 1.11
TOP3A-213ENST00000582230 ZNF598Q86UK7 904 aaKnown RBP21.98■■□□□ 1.11
TOP3A-213ENST00000582230 CDR2LQ86X02 465 aaPredicted RBP21.98■■□□□ 1.11
TOP3A-213ENST00000582230 SPATA20Q8TB22 786 aa21.98■■□□□ 1.11
TOP3A-213ENST00000582230 SMARCE1Q969G3 411 aa21.98■■□□□ 1.11
TOP3A-213ENST00000582230 RAD9AQ99638 391 aa21.98■■□□□ 1.11
TOP3A-213ENST00000582230 TCHPQ9BT92 498 aa21.98■■□□□ 1.11
TOP3A-213ENST00000582230 EIF2AQ9BY44 585 aaKnown RBP21.98■■□□□ 1.11
TOP3A-213ENST00000582230 TMEM206Q9H813 350 aa21.98■■□□□ 1.11
TOP3A-213ENST00000582230 INSL6Q9Y581 213 aa21.98■■□□□ 1.11
TOP3A-213ENST00000582230 TLL1O43897 1013 aa21.97■■□□□ 1.11
TOP3A-213ENST00000582230 DGKIO75912 1065 aa21.97■■□□□ 1.11
TOP3A-213ENST00000582230 NPTXRO95502 500 aa21.97■■□□□ 1.11
TOP3A-213ENST00000582230 PROZP22891 400 aa21.97■■□□□ 1.11
TOP3A-213ENST00000582230 ZNF568Q3ZCX4 644 aa21.97■■□□□ 1.11
TOP3A-213ENST00000582230 EEF1DP3Q658K8 133 aa21.97■■□□□ 1.11
TOP3A-213ENST00000582230 FAM109BQ6ICB4 259 aaPredicted RBP21.97■■□□□ 1.11
TOP3A-213ENST00000582230 MPZL3Q6UWV2 235 aa21.97■■□□□ 1.11
TOP3A-213ENST00000582230 TMCO2Q7Z6W1 182 aaPredicted RBP21.97■■□□□ 1.11
TOP3A-213ENST00000582230 ZNF507Q8TCN5 953 aa21.97■■□□□ 1.11
TOP3A-213ENST00000582230 RSPH1Q8WYR4 309 aa21.97■■□□□ 1.11
TOP3A-213ENST00000582230 FGFBP2Q9BYJ0 223 aa21.97■■□□□ 1.11
TOP3A-213ENST00000582230 GTPBP4Q9BZE4 634 aaKnown RBP21.97■■□□□ 1.11
TOP3A-213ENST00000582230 SLC39A2Q9NP94 309 aa21.97■■□□□ 1.11
TOP3A-213ENST00000582230 IPPQ9Y573 584 aa21.97■■□□□ 1.11
TOP3A-213ENST00000582230 PCDHA5Q9Y5H7 936 aa21.97■■□□□ 1.11
TOP3A-213ENST00000582230 PCDHA11Q9Y5I1 949 aa21.97■■□□□ 1.11
TOP3A-213ENST00000582230 UBE4BO95155 1302 aa21.97■■□□□ 1.11
TOP3A-213ENST00000582230 MICAL3Q7RTP6 2002 aa21.96■■□□□ 1.11
TOP3A-213ENST00000582230 CLDN3O15551 220 aa21.96■■□□□ 1.11
TOP3A-213ENST00000582230 PRPF6O94906 941 aaKnown RBP21.96■■□□□ 1.11
TOP3A-213ENST00000582230 MBD3O95983 291 aa21.96■■□□□ 1.11
TOP3A-213ENST00000582230 MCF2P10911 925 aa21.96■■□□□ 1.11
TOP3A-213ENST00000582230 ATF7P17544 494 aaPredicted RBP21.96■■□□□ 1.11
TOP3A-213ENST00000582230 IBSPP21815 317 aaPredicted RBP21.96■■□□□ 1.11
TOP3A-213ENST00000582230 HTRA4P83105 476 aaPredicted RBP21.96■■□□□ 1.11
TOP3A-213ENST00000582230 STK4Q13043 487 aa21.96■■□□□ 1.11
TOP3A-213ENST00000582230 RAB30Q15771 203 aa21.96■■□□□ 1.11
TOP3A-213ENST00000582230 SLFN12LQ6IEE8 588 aa21.96■■□□□ 1.11
TOP3A-213ENST00000582230 FAM117BQ6P1L5 589 aa21.96■■□□□ 1.11
TOP3A-213ENST00000582230 SYCP3Q8IZU3 236 aa21.96■■□□□ 1.11
TOP3A-213ENST00000582230 RNF169Q8NCN4 708 aa21.96■■□□□ 1.11
TOP3A-213ENST00000582230 SMG8Q8ND04 991 aaKnown RBP21.96■■□□□ 1.11
TOP3A-213ENST00000582230 YME1L1Q96TA2 773 aa21.96■■□□□ 1.11
TOP3A-213ENST00000582230 UBN1Q9NPG3 1134 aa21.96■■□□□ 1.11
TOP3A-213ENST00000582230 MSRAQ9UJ68 235 aa21.96■■□□□ 1.11
TOP3A-213ENST00000582230 MYH11P35749 1972 aa21.96■■□□□ 1.11
TOP3A-213ENST00000582230 GRXCR1A8MXD5 290 aa21.95■■□□□ 1.1
TOP3A-213ENST00000582230 KIF20AO95235 890 aa21.95■■□□□ 1.1
TOP3A-213ENST00000582230 ITGA4P13612 1032 aa21.95■■□□□ 1.1
TOP3A-213ENST00000582230 MCL1Q07820 350 aa21.95■■□□□ 1.1
TOP3A-213ENST00000582230 KCNA1Q09470 495 aa21.95■■□□□ 1.1
TOP3A-213ENST00000582230 GLIS3Q8NEA6 775 aa21.95■■□□□ 1.1
TOP3A-213ENST00000582230 CDT1Q9H211 546 aa21.95■■□□□ 1.1
TOP3A-213ENST00000582230 ANKFY1Q9P2R3 1169 aa21.95■■□□□ 1.1
TOP3A-213ENST00000582230 ABLIM1O14639 778 aa21.94■■□□□ 1.1
TOP3A-213ENST00000582230 MATR3P43243 847 aaKnown RBP eCLIP21.94■■□□□ 1.1
TOP3A-213ENST00000582230 RABGGTBP53611 331 aa21.94■■□□□ 1.1
TOP3A-213ENST00000582230 NOLC1Q14978 699 aaKnown RBP eCLIP21.94■■□□□ 1.1
TOP3A-213ENST00000582230 BMT2Q1RMZ1 405 aa21.94■■□□□ 1.1
TOP3A-213ENST00000582230 ABI1Q8IZP0 508 aa21.94■■□□□ 1.1
TOP3A-213ENST00000582230 KIAA0895Q8NCT3 520 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms