RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 CNTNAP3Q9BZ76 1288 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 SFXN1Q9H9B4 322 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 BRMS1Q9HCU9 246 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 DLL3Q9NYJ7 618 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 CHMP5Q9NZZ3 219 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 GABBR1Q9UBS5 961 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 PCDHA4Q9UN74 947 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 AKT3Q9Y243 479 aa7.45□□□□□ -1.22
VCP-205ENST00000479300 MAP1BP46821 2468 aaKnown RBP7.44□□□□□ -1.22
VCP-205ENST00000479300 CACNA1IQ9P0X4 2223 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 CHMP2AO43633 222 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 TRAK2O60296 914 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 DKC1O60832 514 aaKnown RBP eCLIP7.44□□□□□ -1.22
VCP-205ENST00000479300 LRRN2O75325 713 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 DDHD2O94830 711 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 STBD1O95210 358 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 BAG4O95429 457 aaKnown RBP7.44□□□□□ -1.22
VCP-205ENST00000479300 EFEMP2O95967 443 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 SSBP05455 408 aaKnown RBP eCLIP7.44□□□□□ -1.22
VCP-205ENST00000479300 DCNP07585 359 aaKnown RBP7.44□□□□□ -1.22
VCP-205ENST00000479300 SP9P0CG40 484 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 MYBP10242 640 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 ZSCAN20P17040 1043 aaPredicted RBP7.44□□□□□ -1.22
VCP-205ENST00000479300 CIITAP33076 1130 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 ALDH7A1P49419 539 aaKnown RBP7.44□□□□□ -1.22
VCP-205ENST00000479300 DNM2P50570 870 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 TOB2Q14106 344 aaPredicted RBP7.44□□□□□ -1.22
VCP-205ENST00000479300 TRIM29Q14134 588 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 TARBP2Q15633 366 aaKnown RBP7.44□□□□□ -1.22
VCP-205ENST00000479300 NTRK3Q16288 839 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 LETM2Q2VYF4 491 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 HS1BP3Q53T59 392 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 CCDC149Q6ZUS6 474 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 OTOP3Q7RTS5 596 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 TAS1R1Q7RTX1 841 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 MIER3Q7Z3K6 550 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 ZSCAN30Q86W11 494 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 SLC44A3Q8N4M1 653 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 SUMF1Q8NBK3 374 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 TBCKQ8TEA7 893 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 GJA10Q969M2 543 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 ZNF707Q96C28 371 aaPredicted RBP7.44□□□□□ -1.22
VCP-205ENST00000479300 PPP1R9BQ96SB3 815 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 TRAIPQ9BWF2 469 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 MRPL9Q9BYD2 267 aaKnown RBP7.44□□□□□ -1.22
VCP-205ENST00000479300 TBC1D17Q9HA65 648 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 UPF2Q9HAU5 1272 aaKnown RBP7.44□□□□□ -1.22
VCP-205ENST00000479300 DISC1Q9NRI5 854 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 FBXL21Q9UKT6 434 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 CA14Q9ULX7 337 aa7.44□□□□□ -1.22
VCP-205ENST00000479300 CFAP47Q6ZTR5 3102 aa7.43□□□□□ -1.22
VCP-205ENST00000479300 F8W810 466 aa7.43□□□□□ -1.22
VCP-205ENST00000479300 RFPL2O75678 378 aa7.43□□□□□ -1.22
VCP-205ENST00000479300 PAPLNO95428 1278 aa7.43□□□□□ -1.22
VCP-205ENST00000479300 OATP04181 439 aa7.43□□□□□ -1.22
VCP-205ENST00000479300 MLLT3P42568 568 aaPredicted RBP7.43□□□□□ -1.22
VCP-205ENST00000479300 ANAPC15P60006 121 aa7.43□□□□□ -1.22
VCP-205ENST00000479300 CDC42EP1Q00587 391 aa7.43□□□□□ -1.22
VCP-205ENST00000479300 PRKCEQ02156 737 aa7.43□□□□□ -1.22
VCP-205ENST00000479300 SKOR2Q2VWA4 1001 aaPredicted RBP7.43□□□□□ -1.22
VCP-205ENST00000479300 NOMO2Q5JPE7 1267 aa7.43□□□□□ -1.22
VCP-205ENST00000479300 AGMOQ6ZNB7 445 aa7.43□□□□□ -1.22
VCP-205ENST00000479300 C15orf39Q6ZRI6 1047 aa7.43□□□□□ -1.22
VCP-205ENST00000479300 CMASQ8NFW8 434 aaPredicted RBP7.43□□□□□ -1.22
VCP-205ENST00000479300 RDM1Q8NG50 284 aa7.43□□□□□ -1.22
VCP-205ENST00000479300 KCNG4Q8TDN1 519 aa7.43□□□□□ -1.22
VCP-205ENST00000479300 GPR152Q8TDT2 470 aa7.43□□□□□ -1.22
VCP-205ENST00000479300 ACSF2Q96CM8 615 aaPredicted RBP7.43□□□□□ -1.22
VCP-205ENST00000479300 JPH2Q9BR39 696 aaPredicted RBP7.43□□□□□ -1.22
VCP-205ENST00000479300 SH2D3AQ9BRG2 576 aa7.43□□□□□ -1.22
VCP-205ENST00000479300 RPP25Q9BUL9 199 aaKnown RBP7.43□□□□□ -1.22
VCP-205ENST00000479300 FOXQ1Q9C009 403 aa7.43□□□□□ -1.22
VCP-205ENST00000479300 GBP3Q9H0R5 595 aa7.43□□□□□ -1.22
VCP-205ENST00000479300 SEMA4AQ9H3S1 761 aa7.43□□□□□ -1.22
VCP-205ENST00000479300 MAN1C1Q9NR34 630 aa7.43□□□□□ -1.22
VCP-205ENST00000479300 MARCH5Q9NX47 278 aa7.43□□□□□ -1.22
VCP-205ENST00000479300 IGSF9Q9P2J2 1179 aa7.43□□□□□ -1.22
VCP-205ENST00000479300 EPS15L1Q9UBC2 864 aa7.43□□□□□ -1.22
VCP-205ENST00000479300 WNT16Q9UBV4 365 aa7.43□□□□□ -1.22
VCP-205ENST00000479300 INPP5FQ9Y2H2 1132 aa7.43□□□□□ -1.22
VCP-205ENST00000479300 DOCK6Q96HP0 2047 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 A0A087WZ62 844 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 IGKV6-21A0A0C4DH24 114 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 TULP1O00294 542 aaPredicted RBP7.42□□□□□ -1.22
VCP-205ENST00000479300 DYNC1I1O14576 645 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 MSH4O15457 936 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 TEX28O15482 410 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 ZNF623O75123 536 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 SRFP11831 508 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 GCFC2P16383 781 aaKnown RBP7.42□□□□□ -1.22
VCP-205ENST00000479300 KLRC2P26717 231 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 DMTNQ08495 405 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 TBC1D8BQ0IIM8 1120 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 HTR4Q13639 388 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 PUM1Q14671 1186 aaKnown RBP eCLIP7.42□□□□□ -1.22
VCP-205ENST00000479300 RSPO4Q2I0M5 234 aaPredicted RBP7.42□□□□□ -1.22
VCP-205ENST00000479300 Q4G0T1 1027 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 SPECC1Q5M775 1068 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 UBXN11Q5T124 520 aa7.42□□□□□ -1.22
VCP-205ENST00000479300 MOXD1Q6UVY6 613 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms