RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 ITGB1P05556 798 aa4.14□□□□□ -1.75
SNX4-202ENST00000465505 POU3F2P20265 443 aaPredicted RBP4.14□□□□□ -1.75
SNX4-202ENST00000465505 CD40P25942 277 aa4.14□□□□□ -1.75
SNX4-202ENST00000465505 DSG1Q02413 1049 aa4.14□□□□□ -1.75
SNX4-202ENST00000465505 METTL24Q5JXM2 366 aa4.14□□□□□ -1.75
SNX4-202ENST00000465505 UNC5BQ8IZJ1 945 aa4.14□□□□□ -1.75
SNX4-202ENST00000465505 SYNPOQ8N3V7 929 aa4.14□□□□□ -1.75
SNX4-202ENST00000465505 OTUD6BQ8N6M0 293 aa4.14□□□□□ -1.75
SNX4-202ENST00000465505 EFHBQ8N7U6 833 aa4.14□□□□□ -1.75
SNX4-202ENST00000465505 CHTF18Q8WVB6 975 aa4.14□□□□□ -1.75
SNX4-202ENST00000465505 SNRNP27Q8WVK2 155 aaKnown RBP4.14□□□□□ -1.75
SNX4-202ENST00000465505 EVI5LQ96CN4 794 aa4.14□□□□□ -1.75
SNX4-202ENST00000465505 CRAMP1Q96RY5 1269 aa4.14□□□□□ -1.75
SNX4-202ENST00000465505 PDCD2LQ9BRP1 358 aa4.14□□□□□ -1.75
SNX4-202ENST00000465505 FEZ2Q9UHY8 353 aaPredicted RBP4.14□□□□□ -1.75
SNX4-202ENST00000465505 PRDM4Q9UKN5 801 aa4.14□□□□□ -1.75
SNX4-202ENST00000465505 SORCS3Q9UPU3 1222 aa4.14□□□□□ -1.75
SNX4-202ENST00000465505 HS3ST4Q9Y661 456 aa4.14□□□□□ -1.75
SNX4-202ENST00000465505 CENPJQ9HC77 1338 aaPredicted RBP4.14□□□□□ -1.75
SNX4-202ENST00000465505 ZNF891A8MT65 544 aaPredicted RBP4.13□□□□□ -1.75
SNX4-202ENST00000465505 GAS7O60861 476 aa4.13□□□□□ -1.75
SNX4-202ENST00000465505 PPFIA2O75334 1257 aa4.13□□□□□ -1.75
SNX4-202ENST00000465505 PFKMP08237 780 aa4.13□□□□□ -1.75
SNX4-202ENST00000465505 BMP5P22003 454 aa4.13□□□□□ -1.75
SNX4-202ENST00000465505 ZFP36P26651 326 aaKnown RBP4.13□□□□□ -1.75
SNX4-202ENST00000465505 ADRA1BP35368 520 aa4.13□□□□□ -1.75
SNX4-202ENST00000465505 CASRP41180 1078 aa4.13□□□□□ -1.75
SNX4-202ENST00000465505 CALD1Q05682 793 aaKnown RBP4.13□□□□□ -1.75
SNX4-202ENST00000465505 MRPL49Q13405 166 aaKnown RBP4.13□□□□□ -1.75
SNX4-202ENST00000465505 LY6G5CQ5SRR4 150 aa4.13□□□□□ -1.75
SNX4-202ENST00000465505 TAS1R1Q7RTX1 841 aa4.13□□□□□ -1.75
SNX4-202ENST00000465505 SYNE4Q8N205 404 aa4.13□□□□□ -1.75
SNX4-202ENST00000465505 CDYL2Q8N8U2 506 aa4.13□□□□□ -1.75
SNX4-202ENST00000465505 OR52N2Q8NGI0 321 aa4.13□□□□□ -1.75
SNX4-202ENST00000465505 OR5M3Q8NGP4 307 aa4.13□□□□□ -1.75
SNX4-202ENST00000465505 CPT1CQ8TCG5 803 aa4.13□□□□□ -1.75
SNX4-202ENST00000465505 PROKR1Q8TCW9 393 aa4.13□□□□□ -1.75
SNX4-202ENST00000465505 CPPED1Q9BRF8 314 aaPredicted RBP4.13□□□□□ -1.75
SNX4-202ENST00000465505 FDXACB1Q9BRP7 624 aaPredicted RBP4.13□□□□□ -1.75
SNX4-202ENST00000465505 ZSWIM4Q9H7M6 989 aa4.13□□□□□ -1.75
SNX4-202ENST00000465505 METTL14Q9HCE5 456 aaKnown RBP4.13□□□□□ -1.75
SNX4-202ENST00000465505 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.13□□□□□ -1.75
SNX4-202ENST00000465505 PCDHB6Q9Y5E3 794 aa4.13□□□□□ -1.75
SNX4-202ENST00000465505 AHRRA9YTQ3 701 aa4.12□□□□□ -1.75
SNX4-202ENST00000465505 NRP1O14786 923 aa4.12□□□□□ -1.75
SNX4-202ENST00000465505 TRIM24O15164 1050 aa4.12□□□□□ -1.75
SNX4-202ENST00000465505 RRP9O43818 475 aaKnown RBP4.12□□□□□ -1.75
SNX4-202ENST00000465505 KPNA6O60684 536 aa4.12□□□□□ -1.75
SNX4-202ENST00000465505 DNAJC6O75061 913 aa4.12□□□□□ -1.75
SNX4-202ENST00000465505 RAB11FIP3O75154 756 aa4.12□□□□□ -1.75
SNX4-202ENST00000465505 SEC24DO94855 1032 aaPredicted RBP4.12□□□□□ -1.75
SNX4-202ENST00000465505 SCAF4O95104 1147 aaKnown RBP4.12□□□□□ -1.75
SNX4-202ENST00000465505 ZRANB2O95218 330 aaKnown RBP eCLIP4.12□□□□□ -1.75
SNX4-202ENST00000465505 NEK4P51957 841 aa4.12□□□□□ -1.75
SNX4-202ENST00000465505 FOXD4Q12950 439 aaPredicted RBP4.12□□□□□ -1.75
SNX4-202ENST00000465505 PTPAQ15257 358 aa4.12□□□□□ -1.75
SNX4-202ENST00000465505 VPS72Q15906 364 aa4.12□□□□□ -1.75
SNX4-202ENST00000465505 C21orf62-AS1Q17RA5 79 aa4.12□□□□□ -1.75
SNX4-202ENST00000465505 ZBTB41Q5SVQ8 909 aa4.12□□□□□ -1.75
SNX4-202ENST00000465505 GPR158Q5T848 1215 aa4.12□□□□□ -1.75
SNX4-202ENST00000465505 ESPNLQ6ZVH7 1005 aa4.12□□□□□ -1.75
SNX4-202ENST00000465505 FAM83AQ86UY5 434 aa4.12□□□□□ -1.75
SNX4-202ENST00000465505 EGFL6Q8IUX8 553 aa4.12□□□□□ -1.75
SNX4-202ENST00000465505 PASD1Q8IV76 773 aa4.12□□□□□ -1.75
SNX4-202ENST00000465505 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.12□□□□□ -1.75
SNX4-202ENST00000465505 GAB3Q8WWW8 586 aa4.12□□□□□ -1.75
SNX4-202ENST00000465505 UBXN4Q92575 508 aa4.12□□□□□ -1.75
SNX4-202ENST00000465505 LSM14BQ9BX40 385 aaKnown RBP4.12□□□□□ -1.75
SNX4-202ENST00000465505 CPEB1Q9BZB8 566 aaKnown RBP4.12□□□□□ -1.75
SNX4-202ENST00000465505 KCNH6Q9H252 994 aa4.12□□□□□ -1.75
SNX4-202ENST00000465505 ZNF768Q9H5H4 540 aaKnown RBP4.12□□□□□ -1.75
SNX4-202ENST00000465505 THG1LQ9NWX6 298 aaKnown RBP4.12□□□□□ -1.75
SNX4-202ENST00000465505 USP36Q9P275 1121 aaKnown RBP4.12□□□□□ -1.75
SNX4-202ENST00000465505 MSRAQ9UJ68 235 aa4.12□□□□□ -1.75
SNX4-202ENST00000465505 PACSIN3Q9UKS6 424 aa4.12□□□□□ -1.75
SNX4-202ENST00000465505 USP18Q9UMW8 372 aa4.12□□□□□ -1.75
SNX4-202ENST00000465505 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.12□□□□□ -1.75
SNX4-202ENST00000465505 CD2APQ9Y5K6 639 aa4.12□□□□□ -1.75
SNX4-202ENST00000465505 PCSK5Q92824 1860 aa4.11□□□□□ -1.75
SNX4-202ENST00000465505 A0A1W2PR48 441 aa4.11□□□□□ -1.75
SNX4-202ENST00000465505 PRSS38A1L453 326 aa4.11□□□□□ -1.75
SNX4-202ENST00000465505 GRID2IPA4D2P6 1211 aa4.11□□□□□ -1.75
SNX4-202ENST00000465505 CCER2I3L3R5 266 aa4.11□□□□□ -1.75
SNX4-202ENST00000465505 GOLIM4O00461 696 aa4.11□□□□□ -1.75
SNX4-202ENST00000465505 ANP32CO43423 234 aa4.11□□□□□ -1.75
SNX4-202ENST00000465505 RECQL4O94761 1208 aa4.11□□□□□ -1.75
SNX4-202ENST00000465505 RHOBTB3O94955 611 aa4.11□□□□□ -1.75
SNX4-202ENST00000465505 ABHD16AO95870 558 aa4.11□□□□□ -1.75
SNX4-202ENST00000465505 PCBP1Q15365 356 aaKnown RBP eCLIP4.11□□□□□ -1.75
SNX4-202ENST00000465505 TCEA2Q15560 299 aa4.11□□□□□ -1.75
SNX4-202ENST00000465505 CCDC144BQ3MJ40 725 aa4.11□□□□□ -1.75
SNX4-202ENST00000465505 PLEKHG4Q58EX7 1191 aa4.11□□□□□ -1.75
SNX4-202ENST00000465505 DPY19L2P1Q6NXN4 242 aa4.11□□□□□ -1.75
SNX4-202ENST00000465505 LRRC55Q6ZSA7 311 aa4.11□□□□□ -1.75
SNX4-202ENST00000465505 LRRTM3Q86VH5 581 aa4.11□□□□□ -1.75
SNX4-202ENST00000465505 LYSMD2Q8IV50 215 aa4.11□□□□□ -1.75
SNX4-202ENST00000465505 MSL3Q8N5Y2 521 aaKnown RBP4.11□□□□□ -1.75
SNX4-202ENST00000465505 GLB1L3Q8NCI6 653 aaPredicted RBP4.11□□□□□ -1.75
SNX4-202ENST00000465505 RNPC3Q96LT9 517 aaKnown RBP4.11□□□□□ -1.75
SNX4-202ENST00000465505 TMPRSS11EQ9UL52 423 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms