RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 RAD9AQ99638 391 aa20.24■□□□□ 0.83
RFTN1-202ENST00000431547 ZBED2Q9BTP6 218 aa20.24■□□□□ 0.83
RFTN1-202ENST00000431547 TARS2Q9BW92 718 aaKnown RBP20.24■□□□□ 0.83
RFTN1-202ENST00000431547 PDZD7Q9H5P4 517 aa20.24■□□□□ 0.83
RFTN1-202ENST00000431547 PTPRHQ9HD43 1115 aa20.24■□□□□ 0.83
RFTN1-202ENST00000431547 HOOK1Q9UJC3 728 aaKnown RBP20.24■□□□□ 0.83
RFTN1-202ENST00000431547 PCDHB2Q9Y5E7 798 aa20.24■□□□□ 0.83
RFTN1-202ENST00000431547 HTRA4P83105 476 aaPredicted RBP20.23■□□□□ 0.83
RFTN1-202ENST00000431547 PSMD2Q13200 908 aa20.23■□□□□ 0.83
RFTN1-202ENST00000431547 HABP4Q5JVS0 413 aaKnown RBP20.23■□□□□ 0.83
RFTN1-202ENST00000431547 FAM26FQ5R3K3 315 aa20.23■□□□□ 0.83
RFTN1-202ENST00000431547 FAM117BQ6P1L5 589 aa20.23■□□□□ 0.83
RFTN1-202ENST00000431547 CDR2LQ86X02 465 aaPredicted RBP20.23■□□□□ 0.83
RFTN1-202ENST00000431547 MAP4K3Q8IVH8 894 aa20.23■□□□□ 0.83
RFTN1-202ENST00000431547 HPS3Q969F9 1004 aa20.23■□□□□ 0.83
RFTN1-202ENST00000431547 EIF2AQ9BY44 585 aaKnown RBP20.23■□□□□ 0.83
RFTN1-202ENST00000431547 INSL6Q9Y581 213 aa20.23■□□□□ 0.83
RFTN1-202ENST00000431547 PCDHA11Q9Y5I1 949 aa20.23■□□□□ 0.83
RFTN1-202ENST00000431547 TLL1O43897 1013 aa20.22■□□□□ 0.83
RFTN1-202ENST00000431547 TOM1L1O75674 476 aa20.22■□□□□ 0.83
RFTN1-202ENST00000431547 DGKIO75912 1065 aa20.22■□□□□ 0.83
RFTN1-202ENST00000431547 GCNT3O95395 438 aa20.22■□□□□ 0.83
RFTN1-202ENST00000431547 PIGRP01833 764 aa20.22■□□□□ 0.83
RFTN1-202ENST00000431547 RPN1P04843 607 aaKnown RBP20.22■□□□□ 0.83
RFTN1-202ENST00000431547 ATF7P17544 494 aaPredicted RBP20.22■□□□□ 0.83
RFTN1-202ENST00000431547 CASP5P51878 434 aa20.22■□□□□ 0.83
RFTN1-202ENST00000431547 RABGGTBP53611 331 aa20.22■□□□□ 0.83
RFTN1-202ENST00000431547 RAB30Q15771 203 aa20.22■□□□□ 0.83
RFTN1-202ENST00000431547 KMT5BQ4FZB7 885 aa20.22■□□□□ 0.83
RFTN1-202ENST00000431547 EEF1DP3Q658K8 133 aa20.22■□□□□ 0.83
RFTN1-202ENST00000431547 STXBP4Q6ZWJ1 553 aa20.22■□□□□ 0.83
RFTN1-202ENST00000431547 APBB1IPQ7Z5R6 666 aaPredicted RBP20.22■□□□□ 0.83
RFTN1-202ENST00000431547 SMG8Q8ND04 991 aaKnown RBP20.22■□□□□ 0.83
RFTN1-202ENST00000431547 PGBD4Q96DM1 585 aa20.22■□□□□ 0.83
RFTN1-202ENST00000431547 ADPGKQ9BRR6 497 aa20.22■□□□□ 0.83
RFTN1-202ENST00000431547 FGFBP2Q9BYJ0 223 aa20.22■□□□□ 0.83
RFTN1-202ENST00000431547 HOXA2O43364 376 aa20.21■□□□□ 0.83
RFTN1-202ENST00000431547 MYBP10242 640 aa20.21■□□□□ 0.83
RFTN1-202ENST00000431547 PROZP22891 400 aa20.21■□□□□ 0.83
RFTN1-202ENST00000431547 PNOCQ13519 176 aa20.21■□□□□ 0.83
RFTN1-202ENST00000431547 L1TD1Q5T7N2 865 aaKnown RBP20.21■□□□□ 0.83
RFTN1-202ENST00000431547 EPM2AIP1Q7L775 607 aaPredicted RBP20.21■□□□□ 0.83
RFTN1-202ENST00000431547 CCDC47Q96A33 483 aaKnown RBP20.21■□□□□ 0.83
RFTN1-202ENST00000431547 ZNF689Q96CS4 500 aaPredicted RBP20.21■□□□□ 0.83
RFTN1-202ENST00000431547 ACCSQ96QU6 501 aa20.21■□□□□ 0.83
RFTN1-202ENST00000431547 PBX4Q9BYU1 374 aa20.21■□□□□ 0.83
RFTN1-202ENST00000431547 TRIM6Q9C030 488 aaPredicted RBP20.21■□□□□ 0.83
RFTN1-202ENST00000431547 EXOC1Q9NV70 894 aa20.21■□□□□ 0.83
RFTN1-202ENST00000431547 MSRAQ9UJ68 235 aa20.21■□□□□ 0.83
RFTN1-202ENST00000431547 IPPQ9Y573 584 aa20.21■□□□□ 0.83
RFTN1-202ENST00000431547 RANBP2P49792 3224 aaKnown RBP20.2■□□□□ 0.82
RFTN1-202ENST00000431547 ABLIM1O14639 778 aa20.2■□□□□ 0.82
RFTN1-202ENST00000431547 EIF3DO15371 548 aaKnown RBP eCLIP20.2■□□□□ 0.82
RFTN1-202ENST00000431547 RHOBTB3O94955 611 aa20.2■□□□□ 0.82
RFTN1-202ENST00000431547 NPTXRO95502 500 aa20.2■□□□□ 0.82
RFTN1-202ENST00000431547 IBSPP21815 317 aaPredicted RBP20.2■□□□□ 0.82
RFTN1-202ENST00000431547 PBX2P40425 430 aa20.2■□□□□ 0.82
RFTN1-202ENST00000431547 KCNB1Q14721 858 aa20.2■□□□□ 0.82
RFTN1-202ENST00000431547 DCAF4L1Q3SXM0 396 aa20.2■□□□□ 0.82
RFTN1-202ENST00000431547 MPZL3Q6UWV2 235 aa20.2■□□□□ 0.82
RFTN1-202ENST00000431547 HACE1Q8IYU2 909 aa20.2■□□□□ 0.82
RFTN1-202ENST00000431547 RNF169Q8NCN4 708 aa20.2■□□□□ 0.82
RFTN1-202ENST00000431547 SPATA20Q8TB22 786 aa20.2■□□□□ 0.82
RFTN1-202ENST00000431547 ZNF507Q8TCN5 953 aa20.2■□□□□ 0.82
RFTN1-202ENST00000431547 BICD1Q96G01 975 aa20.2■□□□□ 0.82
RFTN1-202ENST00000431547 YME1L1Q96TA2 773 aa20.2■□□□□ 0.82
RFTN1-202ENST00000431547 TCHPQ9BT92 498 aa20.2■□□□□ 0.82
RFTN1-202ENST00000431547 RC3H2Q9HBD1 1191 aaKnown RBP20.2■□□□□ 0.82
RFTN1-202ENST00000431547 EXOC7Q9UPT5 735 aa20.2■□□□□ 0.82
RFTN1-202ENST00000431547 HNRNPDLO14979 420 aaKnown RBP20.19■□□□□ 0.82
RFTN1-202ENST00000431547 SMC2O95347 1197 aa20.19■□□□□ 0.82
RFTN1-202ENST00000431547 MCF2P10911 925 aa20.19■□□□□ 0.82
RFTN1-202ENST00000431547 LIG4P49917 911 aa20.19■□□□□ 0.82
RFTN1-202ENST00000431547 KCNA1Q09470 495 aa20.19■□□□□ 0.82
RFTN1-202ENST00000431547 AGMOQ6ZNB7 445 aa20.19■□□□□ 0.82
RFTN1-202ENST00000431547 GLIS3Q8NEA6 775 aa20.19■□□□□ 0.82
RFTN1-202ENST00000431547 SP7Q8TDD2 431 aaPredicted RBP20.19■□□□□ 0.82
RFTN1-202ENST00000431547 RSPH1Q8WYR4 309 aa20.19■□□□□ 0.82
RFTN1-202ENST00000431547 ZBTB45Q96K62 511 aaPredicted RBP20.19■□□□□ 0.82
RFTN1-202ENST00000431547 GSDMAQ96QA5 445 aa20.19■□□□□ 0.82
RFTN1-202ENST00000431547 CDT1Q9H211 546 aa20.19■□□□□ 0.82
RFTN1-202ENST00000431547 TMEM206Q9H813 350 aa20.19■□□□□ 0.82
RFTN1-202ENST00000431547 SLC39A2Q9NP94 309 aa20.19■□□□□ 0.82
RFTN1-202ENST00000431547 UBN1Q9NPG3 1134 aa20.19■□□□□ 0.82
RFTN1-202ENST00000431547 RNF19AQ9NV58 838 aa20.19■□□□□ 0.82
RFTN1-202ENST00000431547 YBX2Q9Y2T7 364 aaKnown RBP20.19■□□□□ 0.82
RFTN1-202ENST00000431547 SOX1O00570 391 aaPredicted RBP20.18■□□□□ 0.82
RFTN1-202ENST00000431547 CLDN3O15551 220 aa20.18■□□□□ 0.82
RFTN1-202ENST00000431547 PRPF6O94906 941 aaKnown RBP20.18■□□□□ 0.82
RFTN1-202ENST00000431547 FGFR1P11362 822 aa20.18■□□□□ 0.82
RFTN1-202ENST00000431547 ITGA4P13612 1032 aa20.18■□□□□ 0.82
RFTN1-202ENST00000431547 MYOGP15173 224 aa20.18■□□□□ 0.82
RFTN1-202ENST00000431547 MCL1Q07820 350 aa20.18■□□□□ 0.82
RFTN1-202ENST00000431547 STK4Q13043 487 aa20.18■□□□□ 0.82
RFTN1-202ENST00000431547 ZNF568Q3ZCX4 644 aa20.18■□□□□ 0.82
RFTN1-202ENST00000431547 LPPQ93052 612 aa20.18■□□□□ 0.82
RFTN1-202ENST00000431547 TMEM117Q9H0C3 514 aa20.18■□□□□ 0.82
RFTN1-202ENST00000431547 RNF39Q9H2S5 420 aa20.18■□□□□ 0.82
RFTN1-202ENST00000431547 NXF3Q9H4D5 531 aaKnown RBP20.18■□□□□ 0.82
RFTN1-202ENST00000431547 HES2Q9Y543 173 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms