RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 CTR3Q06686 241 aa-1.33□□□□□ -2.62
snR38snR38 DTD1Q07648 150 aaKnown RBP-1.33□□□□□ -2.62
snR38snR38 DCI1Q08558 271 aa-1.33□□□□□ -2.62
snR38snR38 AKR2Q12013 749 aa-1.33□□□□□ -2.62
snR38snR38 RNH203Q12338 110 aa-1.33□□□□□ -2.62
snR38snR38 GAL3P13045 520 aa-1.34□□□□□ -2.62
snR38snR38 MDH3P32419 343 aaKnown RBP RIP-Chip data-1.34□□□□□ -2.62not detected
snR38snR38 ASC1P38011 319 aaKnown RBP-1.34□□□□□ -2.62
snR38snR38 TPC1P53257 314 aa-1.34□□□□□ -2.62
snR38snR38 GYL1Q04322 720 aa-1.34□□□□□ -2.62
snR38snR38 RRG1Q12167 365 aaPredicted RBP-1.34□□□□□ -2.62
snR38snR38 SCM3Q12334 223 aa-1.34□□□□□ -2.62
snR38snR38 YNL146C-AQ3E7Z1 64 aa-1.34□□□□□ -2.62
snR38snR38 SEM1O94742 89 aa-1.35□□□□□ -2.63
snR38snR38 RAD3P06839 778 aa-1.35□□□□□ -2.63
snR38snR38 YHR212W-AP0CX91 67 aa-1.35□□□□□ -2.63
snR38snR38 RSR1P13856 272 aa-1.35□□□□□ -2.63
snR38snR38 YSC83P32792 385 aa-1.35□□□□□ -2.63
snR38snR38 FZF1P32805 299 aa-1.35□□□□□ -2.63
snR38snR38 TPO5P36029 618 aa-1.35□□□□□ -2.63
snR38snR38 DRE2P36152 348 aa-1.35□□□□□ -2.63
snR38snR38 PET8P38921 284 aa-1.35□□□□□ -2.63
snR38snR38 YFL064CP43540 174 aa-1.35□□□□□ -2.63
snR38snR38 FYV8P46949 817 aaKnown RBP-1.35□□□□□ -2.63
snR38snR38 TAD2P47058 250 aa-1.35□□□□□ -2.63
snR38snR38 JJJ1P53863 590 aa-1.35□□□□□ -2.63
snR38snR38 AAD15Q08361 143 aa-1.35□□□□□ -2.63
snR38snR38 ATO3Q12359 275 aa-1.35□□□□□ -2.63
snR38snR38 ENT1Q12518 454 aa-1.35□□□□□ -2.63
snR38snR38 DET1Q99288 334 aaKnown RBP-1.35□□□□□ -2.63
snR38snR38 TOM40P23644 387 aaKnown RBP-1.36□□□□□ -2.63
snR38snR38 PUP2P32379 260 aa-1.36□□□□□ -2.63
snR38snR38 GCG1P32656 232 aaKnown RBP-1.36□□□□□ -2.63
snR38snR38 TMA19P35691 167 aaKnown RBP-1.36□□□□□ -2.63
snR38snR38 YEA4P40004 342 aa-1.36□□□□□ -2.63
snR38snR38 YKE4P40544 346 aa-1.36□□□□□ -2.63
snR38snR38 PRP24P49960 444 aaKnown RBP-1.36□□□□□ -2.63
snR38snR38 YNR066CP53752 436 aa-1.36□□□□□ -2.63
snR38snR38 MIM1Q08176 113 aa-1.36□□□□□ -2.63
snR38snR38 USB1Q12208 290 aaKnown RBP-1.36□□□□□ -2.63
snR38snR38 FSH3Q99369 266 aa-1.36□□□□□ -2.63
snR38snR38 OSM1P21375 501 aaKnown RBP-1.37□□□□□ -2.63
snR38snR38 SWI3P32591 825 aa-1.37□□□□□ -2.63
snR38snR38 NRP1P32770 719 aaKnown RBP RIP-Chip data-1.37□□□□□ -2.63not detected
snR38snR38 MUD2P36084 527 aaKnown RBP-1.37□□□□□ -2.63
snR38snR38 ERV15P38312 142 aa-1.37□□□□□ -2.63
snR38snR38 AGE2P40529 298 aa-1.37□□□□□ -2.63
snR38snR38 YIL012WP40551 113 aa-1.37□□□□□ -2.63
snR38snR38 RPE1P46969 238 aa-1.37□□□□□ -2.63
snR38snR38 DOS2P54858 310 aa-1.37□□□□□ -2.63
snR38snR38 SEC13Q04491 297 aaKnown RBP-1.37□□□□□ -2.63
snR38snR38 IMP1P28627 190 aa-1.38□□□□□ -2.63
snR38snR38 RIM1P32445 135 aaKnown RBP-1.38□□□□□ -2.63
snR38snR38 ZRT1P32804 376 aa-1.38□□□□□ -2.63
snR38snR38 VAM7P32912 316 aa-1.38□□□□□ -2.63
snR38snR38 BUD2P33314 1104 aa-1.38□□□□□ -2.63
snR38snR38 PRX1P34227 261 aaKnown RBP-1.38□□□□□ -2.63
snR38snR38 TVP38P36164 337 aa-1.38□□□□□ -2.63
snR38snR38 QDR3P38227 689 aa-1.38□□□□□ -2.63
snR38snR38 NDE1P40215 560 aa-1.38□□□□□ -2.63
snR38snR38 YIL001WP40560 513 aa-1.38□□□□□ -2.63
snR38snR38 RTT102P53330 157 aa-1.38□□□□□ -2.63
snR38snR38 SWT21P53873 357 aaPredicted RBP-1.38□□□□□ -2.63
snR38snR38 ECM18Q04623 453 aa-1.38□□□□□ -2.63
snR38snR38 PEX10Q05568 337 aa-1.38□□□□□ -2.63
snR38snR38 ATG5Q12380 294 aa-1.38□□□□□ -2.63
snR38snR38 PRM4Q12498 284 aa-1.38□□□□□ -2.63
snR38snR38 MRPL3P36516 390 aa-1.39□□□□□ -2.63
snR38snR38 SVP26P38869 228 aa-1.39□□□□□ -2.63
snR38snR38 SMF1P38925 575 aa-1.39□□□□□ -2.63
snR38snR38 SPO22P40511 975 aa-1.39□□□□□ -2.63
snR38snR38 RPT4P53549 437 aaKnown RBP-1.39□□□□□ -2.63
snR38snR38 VPS72Q03388 795 aa-1.39□□□□□ -2.63
snR38snR38 ACL4Q03771 387 aa-1.39□□□□□ -2.63
snR38snR38 AIM33Q04516 312 aa-1.39□□□□□ -2.63
snR38snR38 YDR341CQ05506 607 aaKnown RBP-1.39□□□□□ -2.63
snR38snR38 YPL278CQ08990 100 aa-1.39□□□□□ -2.63
snR38snR38 RPN6Q12377 434 aa-1.39□□□□□ -2.63
snR38snR38 NOT5Q12514 560 aaPredicted RBP-1.39□□□□□ -2.63
snR38snR38 RPS3P05750 240 aaKnown RBP-1.4□□□□□ -2.63
snR38snR38 PHO91P27514 894 aa-1.4□□□□□ -2.63
snR38snR38 EFB1P32471 206 aaKnown RBP-1.4□□□□□ -2.63
snR38snR38 RPN12P32496 274 aa-1.4□□□□□ -2.63
snR38snR38 MRPS5P33759 307 aa-1.4□□□□□ -2.63
snR38snR38 TOM22P49334 152 aa-1.4□□□□□ -2.63
snR38snR38 LST7P53237 242 aa-1.4□□□□□ -2.63
snR38snR38 YGR219WP53307 113 aa-1.4□□□□□ -2.63
snR38snR38 HCH1P53834 153 aa-1.4□□□□□ -2.63
snR38snR38 ASI3P53983 676 aa-1.4□□□□□ -2.63
snR38snR38 ADH6Q04894 360 aaKnown RBP-1.4□□□□□ -2.63
snR38snR38 MSA1Q08471 629 aa-1.4□□□□□ -2.63
snR38snR38 RPN5Q12250 445 aaKnown RBP-1.4□□□□□ -2.63
snR38snR38 CLB3P24870 427 aa-1.41□□□□□ -2.64
snR38snR38 UTP9P38882 575 aaKnown RBP-1.41□□□□□ -2.64
snR38snR38 EDC3P39998 551 aaKnown RBP-1.41□□□□□ -2.64
snR38snR38 KRE29P40026 464 aa-1.41□□□□□ -2.64
snR38snR38 YIL102CP40488 101 aa-1.41□□□□□ -2.64
snR38snR38 KEL2P50090 882 aa-1.41□□□□□ -2.64
snR38snR38 MEH1Q02205 184 aa-1.41□□□□□ -2.64
snR38snR38 PSY3Q12318 242 aa-1.41□□□□□ -2.64
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms