RNA–Protein interactions for RNA: YPR066W

UBA3, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene UBA3, Length 900 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBA3	YPR066W	YMR181C	Q03231	154 aa		4.55	□□□□□ -1.68
UBA3	YPR066W	SMA2	Q04658	369 aa		4.55	□□□□□ -1.68
UBA3	YPR066W	SFH1	Q06168	426 aa		4.55	□□□□□ -1.68
UBA3	YPR066W	PEX27	Q08580	376 aa		4.55	□□□□□ -1.68
UBA3	YPR066W	RPN8	Q08723	338 aa	Known RBP	4.55	□□□□□ -1.68
UBA3	YPR066W	THP3	Q12049	470 aa	Known RBP	4.55	□□□□□ -1.68
UBA3	YPR066W	APC9	Q12107	265 aa		4.55	□□□□□ -1.68
UBA3	YPR066W	YDR262W	Q12331	272 aa		4.55	□□□□□ -1.68
UBA3	YPR066W	SSC1	P0CS90	654 aa	Known RBP	4.54	□□□□□ -1.68
UBA3	YPR066W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
UBA3	YPR066W	SDH3	P33421	198 aa		4.54	□□□□□ -1.68
UBA3	YPR066W	ATP3	P38077	311 aa	Known RBP	4.54	□□□□□ -1.68
UBA3	YPR066W	YBR032W	P38223	100 aa		4.54	□□□□□ -1.68
UBA3	YPR066W	YHR045W	P38775	560 aa		4.54	□□□□□ -1.68
UBA3	YPR066W	YHR127W	P38833	243 aa	Known RBP	4.54	□□□□□ -1.68
UBA3	YPR066W	YDR089W	P38966	869 aa		4.54	□□□□□ -1.68
UBA3	YPR066W	NPT1	P39683	429 aa	Known RBP	4.54	□□□□□ -1.68
UBA3	YPR066W	GIM4	P40005	111 aa	Known RBP	4.54	□□□□□ -1.68
UBA3	YPR066W	PEP8	P40335	379 aa		4.54	□□□□□ -1.68
UBA3	YPR066W	YFR018C	P43599	363 aa		4.54	□□□□□ -1.68
UBA3	YPR066W	EGD1	Q02642	157 aa	Known RBP	4.54	□□□□□ -1.68
UBA3	YPR066W	VHS1	Q03785	461 aa		4.54	□□□□□ -1.68
UBA3	YPR066W	YOL107W	Q12239	342 aa		4.54	□□□□□ -1.68
UBA3	YPR066W	TPT1	Q12272	230 aa	Known RBP	4.54	□□□□□ -1.68
UBA3	YPR066W	RRP12	Q12754	1228 aa	Known RBP	4.54	□□□□□ -1.68
UBA3	YPR066W	PRP8	P33334	2413 aa	Known RBP	4.54	□□□□□ -1.68
UBA3	YPR066W	CDC8	P00572	216 aa		4.53	□□□□□ -1.68
UBA3	YPR066W	SPT3	P06844	337 aa		4.53	□□□□□ -1.68
UBA3	YPR066W	GAL7	P08431	366 aa		4.53	□□□□□ -1.68
UBA3	YPR066W	ARF1	P11076	181 aa	Known RBP	4.53	□□□□□ -1.68
UBA3	YPR066W	YPT52	P36018	234 aa	Known RBP	4.53	□□□□□ -1.68
UBA3	YPR066W	NAT2	P37293	288 aa		4.53	□□□□□ -1.68
UBA3	YPR066W	MAK5	P38112	773 aa	Predicted RBP	4.53	□□□□□ -1.68
UBA3	YPR066W	TRM7	P38238	310 aa	Known RBP	4.53	□□□□□ -1.68
UBA3	YPR066W	GGC1	P38988	300 aa		4.53	□□□□□ -1.68
UBA3	YPR066W	SFH5	P47008	294 aa		4.53	□□□□□ -1.68
UBA3	YPR066W	YDL186W	P48568	277 aa		4.53	□□□□□ -1.68
UBA3	YPR066W	AIF1	P52923	378 aa		4.53	□□□□□ -1.68
UBA3	YPR066W	YGR015C	P53208	328 aa		4.53	□□□□□ -1.68
UBA3	YPR066W	GOR1	P53839	350 aa		4.53	□□□□□ -1.68
UBA3	YPR066W	GAS3	Q03655	524 aa		4.53	□□□□□ -1.68
UBA3	YPR066W	CCE1	Q03702	353 aa		4.53	□□□□□ -1.68
UBA3	YPR066W	RIF2	Q06208	395 aa		4.53	□□□□□ -1.68
UBA3	YPR066W	ASA1	Q06822	443 aa		4.53	□□□□□ -1.68
UBA3	YPR066W	LDS2	Q08218	356 aa		4.53	□□□□□ -1.68
UBA3	YPR066W	SNX3	Q08826	162 aa	Known RBP	4.53	□□□□□ -1.68
UBA3	YPR066W	RTC5	Q12108	567 aa	Known RBP	4.53	□□□□□ -1.68
UBA3	YPR066W	GLE1	Q12315	538 aa		4.53	□□□□□ -1.68
UBA3	YPR066W	NCA2	Q12374	616 aa		4.53	□□□□□ -1.68
UBA3	YPR066W	MHT1	Q12525	324 aa		4.53	□□□□□ -1.68
UBA3	YPR066W	RNA1	P11745	407 aa	Known RBP	4.52	□□□□□ -1.69
UBA3	YPR066W	DOA1	P36037	715 aa		4.52	□□□□□ -1.69
UBA3	YPR066W	PHO89	P38361	574 aa		4.52	□□□□□ -1.69
UBA3	YPR066W	COA1	P40452	197 aa		4.52	□□□□□ -1.69
UBA3	YPR066W	YJL213W	P40896	331 aa		4.52	□□□□□ -1.69
UBA3	YPR066W	CLD1	P53264	445 aa		4.52	□□□□□ -1.69
UBA3	YPR066W	RRN9	P53437	365 aa		4.52	□□□□□ -1.69
UBA3	YPR066W	BCH1	Q05029	724 aa		4.52	□□□□□ -1.69
UBA3	YPR066W	GRS2	Q06817	618 aa		4.52	□□□□□ -1.69
UBA3	YPR066W	YPL245W	Q12179	454 aa	Known RBP	4.52	□□□□□ -1.69
UBA3	YPR066W	MDY2	Q12285	212 aa		4.52	□□□□□ -1.69
UBA3	YPR066W	RGS2	Q99188	309 aa		4.52	□□□□□ -1.69
UBA3	YPR066W	GDH1	P07262	454 aa	Known RBP	4.51	□□□□□ -1.69
UBA3	YPR066W	EXG1	P23776	448 aa	Known RBP	4.51	□□□□□ -1.69
UBA3	YPR066W	LIN1	P38852	340 aa	Predicted RBP	4.51	□□□□□ -1.69
UBA3	YPR066W	MDM31	P38880	579 aa		4.51	□□□□□ -1.69
UBA3	YPR066W	MEP1	P40260	492 aa		4.51	□□□□□ -1.69
UBA3	YPR066W	GCD14	P46959	383 aa	Predicted RBP	4.51	□□□□□ -1.69
UBA3	YPR066W	YGR266W	P53326	701 aa		4.51	□□□□□ -1.69
UBA3	YPR066W	COS1	P53822	381 aa		4.51	□□□□□ -1.69
UBA3	YPR066W	RMI1	Q02685	241 aa		4.51	□□□□□ -1.69
UBA3	YPR066W	ABZ2	Q03266	374 aa		4.51	□□□□□ -1.69
UBA3	YPR066W	VPS60	Q03390	229 aa		4.51	□□□□□ -1.69
UBA3	YPR066W	YLR177W	Q06251	628 aa		4.51	□□□□□ -1.69
UBA3	YPR066W	YLR053C	Q12026	108 aa		4.51	□□□□□ -1.69
UBA3	YPR066W	MEC1	P38111	2368 aa		4.5	□□□□□ -1.69
UBA3	YPR066W	TPK3	P05986	398 aa		4.5	□□□□□ -1.69
UBA3	YPR066W	CAP2	P13517	287 aa		4.5	□□□□□ -1.69
UBA3	YPR066W	CPR1	P14832	162 aa	Known RBP	4.5	□□□□□ -1.69
UBA3	YPR066W	CHA1	P25379	360 aa	Known RBP	4.5	□□□□□ -1.69
UBA3	YPR066W	SPS22	P25380	463 aa		4.5	□□□□□ -1.69
UBA3	YPR066W	MXR2	P25566	168 aa		4.5	□□□□□ -1.69
UBA3	YPR066W	MSK1	P32048	576 aa		4.5	□□□□□ -1.69
UBA3	YPR066W	AGA1	P32323	725 aa		4.5	□□□□□ -1.69
UBA3	YPR066W	COX13	P32799	129 aa		4.5	□□□□□ -1.69
UBA3	YPR066W	SFC1	P33303	322 aa		4.5	□□□□□ -1.69
UBA3	YPR066W	SKT5	P34226	696 aa		4.5	□□□□□ -1.69
UBA3	YPR066W	SPT10	P35208	640 aa		4.5	□□□□□ -1.69
UBA3	YPR066W	YBR139W	P38109	508 aa		4.5	□□□□□ -1.69
UBA3	YPR066W	CHK1	P38147	527 aa		4.5	□□□□□ -1.69
UBA3	YPR066W	JLP2	P40206	208 aa		4.5	□□□□□ -1.69
UBA3	YPR066W	YIL086C	P40503	102 aa		4.5	□□□□□ -1.69
UBA3	YPR066W	YJR149W	P47177	404 aa		4.5	□□□□□ -1.69
UBA3	YPR066W	MSO1	P53604	210 aa	Known RBP	4.5	□□□□□ -1.69
UBA3	YPR066W	IBD2	P53892	351 aa		4.5	□□□□□ -1.69
UBA3	YPR066W	SPR6	Q01684	191 aa		4.5	□□□□□ -1.69
UBA3	YPR066W	YLR030W	Q07967	263 aa		4.5	□□□□□ -1.69
UBA3	YPR066W	RAX1	Q08760	435 aa		4.5	□□□□□ -1.69
UBA3	YPR066W	AIM45	Q12480	344 aa	Known RBP	4.5	□□□□□ -1.69
UBA3	YPR066W	CYR1	P08678	2026 aa	Known RBP	4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms