RNA–Protein interactions for RNA: YOR343W-B

YOR343W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YOR343W-B, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOR343W-BYOR343W-B AFG3P39925 761 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B OSW5P40219 148 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B OST1P41543 476 aaKnown RBP1.63□□□□□ -2.15
YOR343W-BYOR343W-B MRH4P53166 561 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B RPL26BP53221 127 aaKnown RBP1.63□□□□□ -2.15
YOR343W-BYOR343W-B YMR206WQ03695 313 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B YMR166CQ03829 368 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B SDO1Q07953 250 aaKnown RBP1.63□□□□□ -2.15
YOR343W-BYOR343W-B RPL25P04456 142 aaKnown RBP1.63□□□□□ -2.15
YOR343W-BYOR343W-B RPC40P07703 335 aaKnown RBP1.63□□□□□ -2.15
YOR343W-BYOR343W-B RNA15P25299 296 aaPredicted RBP1.63□□□□□ -2.15
YOR343W-BYOR343W-B NAM9P27929 486 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B HOM6P31116 359 aaKnown RBP1.63□□□□□ -2.15
YOR343W-BYOR343W-B YKL070WP36087 169 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B RTC2P38279 296 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B NDT80P38830 627 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B ASP1P38986 381 aaPredicted RBP1.63□□□□□ -2.15
YOR343W-BYOR343W-B EFM4P40516 257 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B YJR085CP47131 105 aaKnown RBP1.63□□□□□ -2.15
YOR343W-BYOR343W-B YGL260WP53056 76 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B YNL134CP53912 376 aaKnown RBP1.63□□□□□ -2.15
YOR343W-BYOR343W-B ABF2Q02486 183 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B IRC4Q03036 179 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B NFI1Q12216 726 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B BCY1P07278 416 aaKnown RBP1.63□□□□□ -2.15
YOR343W-BYOR343W-B COS2P0CX12 379 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B COS3P0CX13 379 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B SRB4P32569 687 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B CLB6P32943 380 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B YOX1P34161 385 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B PRX1P34227 261 aaKnown RBP1.63□□□□□ -2.15
YOR343W-BYOR343W-B YHR177WP38867 453 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B GDS1P41913 522 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B EMC2P47133 292 aaKnown RBP1.63□□□□□ -2.15
YOR343W-BYOR343W-B SLX9P53251 210 aaPredicted RBP1.63□□□□□ -2.15
YOR343W-BYOR343W-B MRPL35Q06678 367 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B GLE1Q12315 538 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B PFK27Q12471 397 aaPredicted RBP1.63□□□□□ -2.15
YOR343W-BYOR343W-B SEY1Q99287 776 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B YML133CQ03099 1374 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B YLL066CQ99208 1374 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B TY1B-AO13527 1196 aaKnown RBP1.63□□□□□ -2.15
YOR343W-BYOR343W-B MYO3P36006 1272 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B YHL049CP38722 271 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B ATG7P38862 630 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B YFR018CP43599 363 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B RRP46P53256 223 aaPredicted RBP1.63□□□□□ -2.15
YOR343W-BYOR343W-B ZRG17P53735 605 aa1.63□□□□□ -2.15
YOR343W-BYOR343W-B YNL010WP53981 241 aaKnown RBP1.63□□□□□ -2.15
YOR343W-BYOR343W-B ADH6Q04894 360 aaKnown RBP1.63□□□□□ -2.15
YOR343W-BYOR343W-B YOR283WQ12040 230 aaKnown RBP1.63□□□□□ -2.15
YOR343W-BYOR343W-B STE2D6VTK4 431 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B DAL82P21705 255 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B DEG1P31115 442 aaKnown RBP1.62□□□□□ -2.15
YOR343W-BYOR343W-B KRE29P40026 464 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B YIL054WP40524 105 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B YJR079WP47126 109 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B ECM7Q06200 448 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B YPL264CQ08980 353 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B YOR338WQ99326 363 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B RPL42AP0CX27 106 aaKnown RBP1.62□□□□□ -2.15
YOR343W-BYOR343W-B RPL42BP0CX28 106 aaKnown RBP1.62□□□□□ -2.15
YOR343W-BYOR343W-B PUT4P15380 627 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B RPB4P20433 221 aaPredicted RBP1.62□□□□□ -2.15
YOR343W-BYOR343W-B UTR1P21373 530 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B KTI12P34253 313 aaKnown RBP1.62□□□□□ -2.15
YOR343W-BYOR343W-B SOL2P37262 315 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B IRC18P47056 224 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B SWS2P53937 143 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B RNH201P53942 307 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B TIM11P81449 96 aaPredicted RBP1.62□□□□□ -2.15
YOR343W-BYOR343W-B ECM11Q04110 302 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B ABP140Q08641 628 aaKnown RBP1.62□□□□□ -2.15
YOR343W-BYOR343W-B YOR114WQ12219 294 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B NOT5Q12514 560 aaPredicted RBP1.62□□□□□ -2.15
YOR343W-BYOR343W-B TFS1P14306 219 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B SKI2P35207 1287 aaKnown RBP RIP-Chip data1.62□□□□□ -2.15not detected
YOR343W-BYOR343W-B SWD3P38123 315 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B SIP3P38717 1229 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B SMD1Q02260 146 aaPredicted RBP1.62□□□□□ -2.15
YOR343W-BYOR343W-B YMR010WQ03687 405 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B ATG31Q12421 196 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B ISD11Q6Q560 94 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B SAL1D6W196 494 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B ECM13P38195 257 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B IML3P38265 245 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B YFL067WP43537 175 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B CTK3P46963 296 aaPredicted RBP1.62□□□□□ -2.15
YOR343W-BYOR343W-B NUP116Q02630 1113 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B VBA1Q04301 562 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B YPR064WQ12492 139 aa1.62□□□□□ -2.15
YOR343W-BYOR343W-B MET16P18408 261 aaPredicted RBP1.61□□□□□ -2.15
YOR343W-BYOR343W-B YKL071WP36086 256 aa1.61□□□□□ -2.15
YOR343W-BYOR343W-B YHB1P39676 399 aaKnown RBP1.61□□□□□ -2.15
YOR343W-BYOR343W-B BIR1P47134 954 aa1.61□□□□□ -2.15
YOR343W-BYOR343W-B YJR149WP47177 404 aa1.61□□□□□ -2.15
YOR343W-BYOR343W-B COQ5P49017 307 aa1.61□□□□□ -2.15
YOR343W-BYOR343W-B NOP19P53317 196 aaPredicted RBP1.61□□□□□ -2.15
YOR343W-BYOR343W-B YNL040WP53960 456 aaPredicted RBP1.61□□□□□ -2.15
YOR343W-BYOR343W-B MRPS17Q03246 237 aaPredicted RBP1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms