RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C EXG1P23776 448 aaKnown RBP3.7□□□□□ -1.82
SRP40YKR092C ERG8P24521 451 aa3.7□□□□□ -1.82
SRP40YKR092C ERV1P27882 189 aa3.7□□□□□ -1.82
SRP40YKR092C TRR1P29509 319 aaKnown RBP3.7□□□□□ -1.82
SRP40YKR092C SYN8P31377 255 aa3.7□□□□□ -1.82
SRP40YKR092C ECM25P32525 599 aa3.7□□□□□ -1.82
SRP40YKR092C SKG6P32900 734 aaPredicted RBP3.7□□□□□ -1.82
SRP40YKR092C SOF1P33750 489 aaKnown RBP3.7□□□□□ -1.82
SRP40YKR092C DRE2P36152 348 aa3.7□□□□□ -1.82
SRP40YKR092C BNA4P38169 460 aa3.7□□□□□ -1.82
SRP40YKR092C RRN10P38204 145 aa3.7□□□□□ -1.82
SRP40YKR092C ZTA1P38230 334 aaKnown RBP3.7□□□□□ -1.82
SRP40YKR092C GPI16P38875 610 aa3.7□□□□□ -1.82
SRP40YKR092C PSD1P39006 500 aa3.7□□□□□ -1.82
SRP40YKR092C END3P39013 349 aa3.7□□□□□ -1.82
SRP40YKR092C PFK26P40433 827 aaKnown RBP3.7□□□□□ -1.82
SRP40YKR092C MAM33P40513 266 aa3.7□□□□□ -1.82
SRP40YKR092C IDP2P41939 412 aa3.7□□□□□ -1.82
SRP40YKR092C PRM10P42946 383 aa3.7□□□□□ -1.82
SRP40YKR092C YHC3P47040 408 aa3.7□□□□□ -1.82
SRP40YKR092C GPI14P47088 403 aaKnown RBP3.7□□□□□ -1.82
SRP40YKR092C YJR030CP47101 745 aa3.7□□□□□ -1.82
SRP40YKR092C ADO1P47143 340 aaKnown RBP3.7□□□□□ -1.82
SRP40YKR092C PHB2P50085 310 aa3.7□□□□□ -1.82
SRP40YKR092C RSM27P53305 110 aa3.7□□□□□ -1.82
SRP40YKR092C YNL260CP53846 198 aa3.7□□□□□ -1.82
SRP40YKR092C MTQ1P53944 314 aa3.7□□□□□ -1.82
SRP40YKR092C COG5P53951 403 aa3.7□□□□□ -1.82
SRP40YKR092C EFM6P53970 246 aa3.7□□□□□ -1.82
SRP40YKR092C NUP49Q02199 472 aa3.7□□□□□ -1.82
SRP40YKR092C ACL4Q03771 387 aa3.7□□□□□ -1.82
SRP40YKR092C YDR249CQ03787 373 aa3.7□□□□□ -1.82
SRP40YKR092C ARX1Q03862 593 aaKnown RBP3.7□□□□□ -1.82
SRP40YKR092C TAF9Q05027 157 aa3.7□□□□□ -1.82
SRP40YKR092C BUR2Q05949 395 aa3.7□□□□□ -1.82
SRP40YKR092C RIF2Q06208 395 aa3.7□□□□□ -1.82
SRP40YKR092C ATP14Q12349 124 aa3.7□□□□□ -1.82
SRP40YKR092C PSF1Q12488 208 aa3.7□□□□□ -1.82
SRP40YKR092C YLR361C-AQ3E795 98 aa3.7□□□□□ -1.82
SRP40YKR092C PET54P10834 293 aa3.69□□□□□ -1.82
SRP40YKR092C COQ3P27680 312 aa3.69□□□□□ -1.82
SRP40YKR092C CWP1P28319 239 aa3.69□□□□□ -1.82
SRP40YKR092C YIM1P28625 365 aa3.69□□□□□ -1.82
SRP40YKR092C SPT14P32363 452 aa3.69□□□□□ -1.82
SRP40YKR092C MDH3P32419 343 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
SRP40YKR092C HYM1P32464 399 aa3.69□□□□□ -1.82
SRP40YKR092C NDC1P32500 655 aa3.69□□□□□ -1.82
SRP40YKR092C SRB5P32585 307 aa3.69□□□□□ -1.82
SRP40YKR092C CSG2P35206 410 aa3.69□□□□□ -1.82
SRP40YKR092C SKG1P36169 355 aa3.69□□□□□ -1.82
SRP40YKR092C RIB1P38066 345 aa3.69□□□□□ -1.82
SRP40YKR092C SRO77P38163 1010 aa3.69□□□□□ -1.82
SRP40YKR092C ECM13P38195 257 aa3.69□□□□□ -1.82
SRP40YKR092C YBR062CP38239 180 aa3.69□□□□□ -1.82
SRP40YKR092C YBR220CP38318 560 aa3.69□□□□□ -1.82
SRP40YKR092C RRT2P38332 387 aa3.69□□□□□ -1.82
SRP40YKR092C YPT31P38555 223 aaKnown RBP3.69□□□□□ -1.82
SRP40YKR092C EFM1P38732 585 aa3.69□□□□□ -1.82
SRP40YKR092C YHR122WP38829 231 aa3.69□□□□□ -1.82
SRP40YKR092C SPL2P38839 148 aa3.69□□□□□ -1.82
SRP40YKR092C VMA7P39111 118 aa3.69□□□□□ -1.82
SRP40YKR092C DHH1P39517 506 aaKnown RBP3.69□□□□□ -1.82
SRP40YKR092C RBG1P39729 369 aa3.69□□□□□ -1.82
SRP40YKR092C SMX2P40204 77 aaKnown RBP3.69□□□□□ -1.82
SRP40YKR092C DOT5P40553 215 aa3.69□□□□□ -1.82
SRP40YKR092C IME4P41833 600 aa3.69□□□□□ -1.82
SRP40YKR092C FMP33P46998 180 aa3.69□□□□□ -1.82
SRP40YKR092C YPT32P51996 222 aaKnown RBP3.69□□□□□ -1.82
SRP40YKR092C NBP35P52920 328 aa3.69□□□□□ -1.82
SRP40YKR092C NOP19P53317 196 aaPredicted RBP3.69□□□□□ -1.82
SRP40YKR092C YNR062CP53748 327 aa3.69□□□□□ -1.82
SRP40YKR092C CAF40P53829 373 aa3.69□□□□□ -1.82
SRP40YKR092C ALG11P53954 548 aaKnown RBP3.69□□□□□ -1.82
SRP40YKR092C DIG1Q03063 452 aaKnown RBP3.69□□□□□ -1.82
SRP40YKR092C PKR1Q03880 122 aaKnown RBP3.69□□□□□ -1.82
SRP40YKR092C SLF1Q12034 447 aaKnown RBP3.69□□□□□ -1.82
SRP40YKR092C FCF2Q12035 217 aaPredicted RBP3.69□□□□□ -1.82
SRP40YKR092C NUS1Q12063 375 aa3.69□□□□□ -1.82
SRP40YKR092C DAP1Q12091 152 aa3.69□□□□□ -1.82
SRP40YKR092C FCY22Q12119 530 aa3.69□□□□□ -1.82
SRP40YKR092C WTM1Q12363 437 aaKnown RBP3.69□□□□□ -1.82
SRP40YKR092C RKM5Q12367 367 aa3.69□□□□□ -1.82
SRP40YKR092C SLO1Q3E784 85 aa3.69□□□□□ -1.82
SRP40YKR092C VCX1Q99385 411 aa3.69□□□□□ -1.82
SRP40YKR092C YRF1-3P0CX14 1859 aa3.69□□□□□ -1.82
SRP40YKR092C YRF1-7P0CX15 1859 aa3.69□□□□□ -1.82
SRP40YKR092C FAS2P19097 1887 aaKnown RBP3.69□□□□□ -1.82
SRP40YKR092C YRF1-6P53819 1859 aa3.69□□□□□ -1.82
SRP40YKR092C NAM2P11325 894 aa3.68□□□□□ -1.82
SRP40YKR092C GAL3P13045 520 aa3.68□□□□□ -1.82
SRP40YKR092C DPM1P14020 267 aaKnown RBP3.68□□□□□ -1.82
SRP40YKR092C PRE1P22141 198 aaKnown RBP3.68□□□□□ -1.82
SRP40YKR092C YCR006CP25350 157 aa3.68□□□□□ -1.82
SRP40YKR092C RSA4P25382 515 aaKnown RBP3.68□□□□□ -1.82
SRP40YKR092C UBC8P28263 218 aa3.68□□□□□ -1.82
SRP40YKR092C SUA7P29055 345 aaPredicted RBP3.68□□□□□ -1.82
SRP40YKR092C LHP1P33399 275 aaKnown RBP3.68□□□□□ -1.82
SRP40YKR092C SHP1P34223 423 aa3.68□□□□□ -1.82
SRP40YKR092C JEN1P36035 616 aa3.68□□□□□ -1.82
SRP40YKR092C ARN1P38731 627 aa3.68□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms