RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeastyeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT1YJR001W SIZ1Q04195 904 aa4.1□□□□□ -1.75
AVT1YJR001W YDR109CQ04585 715 aa4.1□□□□□ -1.75
AVT1YJR001W YDR124WQ04608 324 aa4.1□□□□□ -1.75
AVT1YJR001W YDR278CQ05612 105 aa4.1□□□□□ -1.75
AVT1YJR001W MRI1Q06489 411 aaKnown RBP4.1□□□□□ -1.75
AVT1YJR001W YDL086WQ07505 273 aa4.1□□□□□ -1.75
AVT1YJR001W HRD1Q08109 551 aa4.1□□□□□ -1.75
AVT1YJR001W PEX27Q08580 376 aa4.1□□□□□ -1.75
AVT1YJR001W SLF1Q12034 447 aaKnown RBP4.1□□□□□ -1.75
AVT1YJR001W MRH1Q12117 320 aaPredicted RBP4.1□□□□□ -1.75
AVT1YJR001W POM33Q12164 279 aa4.1□□□□□ -1.75
AVT1YJR001W WTM1Q12363 437 aaKnown RBP4.1□□□□□ -1.75
AVT1YJR001W AIM45Q12480 344 aaKnown RBP4.1□□□□□ -1.75
AVT1YJR001W YCL012CQ8J0M4 134 aa4.1□□□□□ -1.75
AVT1YJR001W FSH3Q99369 266 aa4.1□□□□□ -1.75
AVT1YJR001W QCR7P00128 127 aa4.09□□□□□ -1.75
AVT1YJR001W AI3P03877 415 aa4.09□□□□□ -1.75
AVT1YJR001W HAP2P06774 265 aa4.09□□□□□ -1.75
AVT1YJR001W RAD10P06838 210 aa4.09□□□□□ -1.75
AVT1YJR001W SCL1P21243 252 aaKnown RBP4.09□□□□□ -1.75
AVT1YJR001W YSR3P23501 404 aa4.09□□□□□ -1.75
AVT1YJR001W FEN2P25621 512 aaKnown RBP4.09□□□□□ -1.75
AVT1YJR001W UBC8P28263 218 aa4.09□□□□□ -1.75
AVT1YJR001W MDH3P32419 343 aaKnown RBP RIP-Chip data4.09□□□□□ -1.75not detected
AVT1YJR001W TAF14P35189 244 aa4.09□□□□□ -1.75
AVT1YJR001W BNA4P38169 460 aa4.09□□□□□ -1.75
AVT1YJR001W VMA7P39111 118 aa4.09□□□□□ -1.75
AVT1YJR001W ATG27P46989 271 aa4.09□□□□□ -1.75
AVT1YJR001W SFH5P47008 294 aa4.09□□□□□ -1.75
AVT1YJR001W MRPS35P53292 345 aa4.09□□□□□ -1.75
AVT1YJR001W GND2P53319 492 aa4.09□□□□□ -1.75
AVT1YJR001W TEX1P53851 422 aaKnown RBP4.09□□□□□ -1.75
AVT1YJR001W KTR5P53966 522 aaPredicted RBP4.09□□□□□ -1.75
AVT1YJR001W YMR253CQ04835 414 aa4.09□□□□□ -1.75
AVT1YJR001W YOR114WQ12219 294 aa4.09□□□□□ -1.75
AVT1YJR001W RPS28BP0C0X0 67 aaKnown RBP4.09□□□□□ -1.76
AVT1YJR001W SEC59P20048 519 aa4.09□□□□□ -1.76
AVT1YJR001W SGV1P23293 657 aaKnown RBP4.09□□□□□ -1.76
AVT1YJR001W EXG1P23776 448 aaKnown RBP4.09□□□□□ -1.76
AVT1YJR001W ACH1P32316 526 aa4.09□□□□□ -1.76
AVT1YJR001W SAC1P32368 623 aaKnown RBP4.09□□□□□ -1.76
AVT1YJR001W HYM1P32464 399 aa4.09□□□□□ -1.76
AVT1YJR001W NRP1P32770 719 aaKnown RBP RIP-Chip data4.09□□□□□ -1.76not detected
AVT1YJR001W ASH1P34233 588 aa4.09□□□□□ -1.76
AVT1YJR001W TCM62P38228 572 aaKnown RBP4.09□□□□□ -1.76
AVT1YJR001W VHC1P38329 1120 aa4.09□□□□□ -1.76
AVT1YJR001W MMS21P38632 267 aa4.09□□□□□ -1.76
AVT1YJR001W CCT4P39078 528 aaKnown RBP4.09□□□□□ -1.76
AVT1YJR001W LCP5P40079 357 aaPredicted RBP4.09□□□□□ -1.76
AVT1YJR001W MRX5P47007 382 aa4.09□□□□□ -1.76
AVT1YJR001W GPI14P47088 403 aaKnown RBP4.09□□□□□ -1.76
AVT1YJR001W BIR1P47134 954 aa4.09□□□□□ -1.76
AVT1YJR001W YPT11P48559 417 aa4.09□□□□□ -1.76
AVT1YJR001W SWC4P53201 476 aa4.09□□□□□ -1.76
AVT1YJR001W YNR066CP53752 436 aa4.09□□□□□ -1.76
AVT1YJR001W UBP16Q02863 499 aa4.09□□□□□ -1.76
AVT1YJR001W PFA5Q03289 374 aa4.09□□□□□ -1.76
AVT1YJR001W PLB2Q03674 706 aa4.09□□□□□ -1.76
AVT1YJR001W AAD15Q08361 143 aa4.09□□□□□ -1.76
AVT1YJR001W YPL199CQ08954 240 aa4.09□□□□□ -1.76
AVT1YJR001W SRL2Q12020 392 aa4.09□□□□□ -1.76
AVT1YJR001W YPR063CQ12160 140 aa4.09□□□□□ -1.76
AVT1YJR001W TRM11Q12463 433 aa4.09□□□□□ -1.76
AVT1YJR001W RPS28AQ3E7X9 67 aaPredicted RBP4.09□□□□□ -1.76
AVT1YJR001W FAS2P19097 1887 aaKnown RBP4.09□□□□□ -1.76
AVT1YJR001W POM152P39685 1337 aa4.08□□□□□ -1.76
AVT1YJR001W COX1P00401 534 aa4.08□□□□□ -1.76
AVT1YJR001W RHO2P06781 192 aa4.08□□□□□ -1.76
AVT1YJR001W HIS5P07172 385 aa4.08□□□□□ -1.76
AVT1YJR001W PUT1P09368 476 aa4.08□□□□□ -1.76
AVT1YJR001W YBR121C-AP0C5L4 52 aa4.08□□□□□ -1.76
AVT1YJR001W ASP3-2P0CX77 362 aa4.08□□□□□ -1.76
AVT1YJR001W ASP3-3P0CX78 362 aa4.08□□□□□ -1.76
AVT1YJR001W ASP3-4P0CX79 362 aa4.08□□□□□ -1.76
AVT1YJR001W ASP3-1P0CZ17 362 aa4.08□□□□□ -1.76
AVT1YJR001W NAM2P11325 894 aa4.08□□□□□ -1.76
AVT1YJR001W MTF1P14908 341 aaKnown RBP4.08□□□□□ -1.76
AVT1YJR001W ERD2P18414 219 aa4.08□□□□□ -1.76
AVT1YJR001W IDP1P21954 428 aaKnown RBP4.08□□□□□ -1.76
AVT1YJR001W NDC1P32500 655 aa4.08□□□□□ -1.76
AVT1YJR001W HES1P35843 434 aa4.08□□□□□ -1.76
AVT1YJR001W MRPL3P36516 390 aa4.08□□□□□ -1.76
AVT1YJR001W RRN10P38204 145 aa4.08□□□□□ -1.76
AVT1YJR001W TRM5P38793 499 aa4.08□□□□□ -1.76
AVT1YJR001W GAT2P40209 560 aa4.08□□□□□ -1.76
AVT1YJR001W YPT32P51996 222 aaKnown RBP4.08□□□□□ -1.76
AVT1YJR001W CWC23P52868 283 aaPredicted RBP4.08□□□□□ -1.76
AVT1YJR001W DOC1P53068 250 aa4.08□□□□□ -1.76
AVT1YJR001W YLR460CP54007 376 aa4.08□□□□□ -1.76
AVT1YJR001W YMR178WQ03219 274 aaKnown RBP4.08□□□□□ -1.76
AVT1YJR001W YMR087WQ04299 284 aa4.08□□□□□ -1.76
AVT1YJR001W PEX30Q06169 523 aa4.08□□□□□ -1.76
AVT1YJR001W SSK1Q07084 712 aa4.08□□□□□ -1.76
AVT1YJR001W ACK1Q07622 623 aaPredicted RBP4.08□□□□□ -1.76
AVT1YJR001W YOL159CQ08300 171 aa4.08□□□□□ -1.76
AVT1YJR001W FCY22Q12119 530 aa4.08□□□□□ -1.76
AVT1YJR001W YIR021W-AQ3E739 70 aa4.08□□□□□ -1.76
AVT1YJR001W SLO1Q3E784 85 aa4.08□□□□□ -1.76
AVT1YJR001W AI5_ALPHAQ9ZZX1 630 aa4.08□□□□□ -1.76
AVT1YJR001W DDI2P0CH63 225 aa4.07□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms