RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C SNX41Q04053 625 aa2.45□□□□□ -2.02
CTK2YJL006C IME2P32581 645 aa2.44□□□□□ -2.02
CTK2YJL006C CAX4P53223 239 aa2.44□□□□□ -2.02
CTK2YJL006C YPL080CQ02826 108 aa2.44□□□□□ -2.02
CTK2YJL006C UTP23Q12339 254 aaKnown RBP2.44□□□□□ -2.02
CTK2YJL006C DRS2P39524 1355 aa2.44□□□□□ -2.02
CTK2YJL006C MCH2P36032 473 aa2.43□□□□□ -2.02
CTK2YJL006C ASP1P38986 381 aaPredicted RBP2.43□□□□□ -2.02
CTK2YJL006C OSW5P40219 148 aa2.43□□□□□ -2.02
CTK2YJL006C YIL059CP40520 121 aa2.43□□□□□ -2.02
CTK2YJL006C RIB4P50861 169 aaPredicted RBP2.43□□□□□ -2.02
CTK2YJL006C YOR292CQ08743 309 aa2.43□□□□□ -2.02
CTK2YJL006C TFC7Q12415 435 aa2.43□□□□□ -2.02
CTK2YJL006C PRP46Q12417 451 aaPredicted RBP2.43□□□□□ -2.02
CTK2YJL006C YPR1Q12458 312 aa2.43□□□□□ -2.02
CTK2YJL006C GCD2P12754 651 aaPredicted RBP2.42□□□□□ -2.02
CTK2YJL006C INO2P26798 304 aa2.42□□□□□ -2.02
CTK2YJL006C CDC40P40968 455 aaPredicted RBP2.42□□□□□ -2.02
CTK2YJL006C DBP6P53734 629 aaKnown RBP2.42□□□□□ -2.02
CTK2YJL006C ACT1P60010 375 aaKnown RBP2.42□□□□□ -2.02
CTK2YJL006C YLR446WQ06204 433 aa2.42□□□□□ -2.02
CTK2YJL006C CUR1Q06469 252 aa2.42□□□□□ -2.02
CTK2YJL006C PBP4Q07362 185 aaKnown RBP2.42□□□□□ -2.02
CTK2YJL006C YPL264CQ08980 353 aa2.42□□□□□ -2.02
CTK2YJL006C VIK1Q12045 647 aa2.42□□□□□ -2.02
CTK2YJL006C ERP3Q12403 225 aa2.42□□□□□ -2.02
CTK2YJL006C TDH3P00359 332 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
CTK2YJL006C CAR2P07991 424 aaKnown RBP2.41□□□□□ -2.02
CTK2YJL006C SAR1P20606 190 aaKnown RBP2.41□□□□□ -2.02
CTK2YJL006C MNN9P39107 395 aaKnown RBP2.41□□□□□ -2.02
CTK2YJL006C RPN14P53196 417 aa2.41□□□□□ -2.02
CTK2YJL006C DCP1Q12517 231 aaPredicted RBP2.41□□□□□ -2.02
CTK2YJL006C HPR1P17629 752 aaKnown RBP2.4□□□□□ -2.03
CTK2YJL006C ARO4P32449 370 aaKnown RBP2.4□□□□□ -2.03
CTK2YJL006C AIM29P36154 155 aa2.4□□□□□ -2.03
CTK2YJL006C EDC2P40023 145 aaPredicted RBP2.4□□□□□ -2.03
CTK2YJL006C LOH1P47055 219 aa2.4□□□□□ -2.03
CTK2YJL006C SWC4P53201 476 aa2.4□□□□□ -2.03
CTK2YJL006C VOA1P53262 265 aa2.4□□□□□ -2.03
CTK2YJL006C YGR266WP53326 701 aa2.4□□□□□ -2.03
CTK2YJL006C YMR111CQ04461 462 aaPredicted RBP2.4□□□□□ -2.03
CTK2YJL006C SEC13Q04491 297 aaKnown RBP2.4□□□□□ -2.03
CTK2YJL006C PFK27Q12471 397 aaPredicted RBP2.4□□□□□ -2.03
CTK2YJL006C LAG2Q92325 660 aa2.4□□□□□ -2.03
CTK2YJL006C IZH4Q99393 312 aa2.4□□□□□ -2.03
CTK2YJL006C RKR1Q04781 1562 aa2.4□□□□□ -2.03
CTK2YJL006C RPS23AP0CX29 145 aaKnown RBP2.39□□□□□ -2.03
CTK2YJL006C RPS23BP0CX30 145 aa2.39□□□□□ -2.03
CTK2YJL006C IFM1P25038 676 aa2.39□□□□□ -2.03
CTK2YJL006C RPL5P26321 297 aaKnown RBP2.39□□□□□ -2.03
CTK2YJL006C VPH2P32341 215 aa2.39□□□□□ -2.03
CTK2YJL006C GPX1P36014 167 aa2.39□□□□□ -2.03
CTK2YJL006C YPC1P38298 316 aa2.39□□□□□ -2.03
CTK2YJL006C PES4P39684 611 aa2.39□□□□□ -2.03
CTK2YJL006C SPO73P40031 143 aa2.39□□□□□ -2.03
CTK2YJL006C LOC1P43586 204 aaPredicted RBP2.39□□□□□ -2.03
CTK2YJL006C COX16P47081 118 aa2.39□□□□□ -2.03
CTK2YJL006C UBC13P52490 153 aa2.39□□□□□ -2.03
CTK2YJL006C BIO4P53630 237 aa2.39□□□□□ -2.03
CTK2YJL006C VAC14Q06708 880 aa2.39□□□□□ -2.03
CTK2YJL006C SIA1Q12212 622 aa2.39□□□□□ -2.03
CTK2YJL006C MDY2Q12285 212 aa2.39□□□□□ -2.03
CTK2YJL006C TAO3P40468 2376 aa2.38□□□□□ -2.03
CTK2YJL006C RPL31AP0C2H8 113 aaKnown RBP2.38□□□□□ -2.03
CTK2YJL006C RPL16BP26785 198 aaKnown RBP2.38□□□□□ -2.03
CTK2YJL006C IMP3P32899 183 aaPredicted RBP2.38□□□□□ -2.03
CTK2YJL006C MRPL6P32904 214 aa2.38□□□□□ -2.03
CTK2YJL006C CSE1P33307 960 aa2.38□□□□□ -2.03
CTK2YJL006C SWD2P36104 329 aaPredicted RBP2.38□□□□□ -2.03
CTK2YJL006C YBR062CP38239 180 aa2.38□□□□□ -2.03
CTK2YJL006C ECM14P38836 430 aa2.38□□□□□ -2.03
CTK2YJL006C YFL064CP43540 174 aa2.38□□□□□ -2.03
CTK2YJL006C YFR045WP43617 309 aa2.38□□□□□ -2.03
CTK2YJL006C DIA1P54005 336 aa2.38□□□□□ -2.03
CTK2YJL006C GTO3Q04806 366 aa2.38□□□□□ -2.03
CTK2YJL006C ARC18Q05933 178 aaKnown RBP2.38□□□□□ -2.03
CTK2YJL006C RRG8Q06109 277 aa2.38□□□□□ -2.03
CTK2YJL006C APC9Q12107 265 aa2.38□□□□□ -2.03
CTK2YJL006C TOM1Q03280 3268 aa2.37□□□□□ -2.03
CTK2YJL006C GCG1P32656 232 aaKnown RBP2.37□□□□□ -2.03
CTK2YJL006C CDC13P32797 924 aaKnown RBP2.37□□□□□ -2.03
CTK2YJL006C RPS0AP32905 252 aaKnown RBP2.37□□□□□ -2.03
CTK2YJL006C TPO5P36029 618 aa2.37□□□□□ -2.03
CTK2YJL006C VAB2P40003 282 aa2.37□□□□□ -2.03
CTK2YJL006C LIF1P53150 421 aa2.37□□□□□ -2.03
CTK2YJL006C SGT2Q12118 346 aaKnown RBP2.37□□□□□ -2.03
CTK2YJL006C IES3Q12345 250 aa2.37□□□□□ -2.03
CTK2YJL006C RAD7P06779 565 aa2.36□□□□□ -2.03
CTK2YJL006C DAL5P15365 543 aa2.36□□□□□ -2.03
CTK2YJL006C RPC25P35718 212 aa2.36□□□□□ -2.03
CTK2YJL006C GDS1P41913 522 aa2.36□□□□□ -2.03
CTK2YJL006C MPP10P47083 593 aaKnown RBP2.36□□□□□ -2.03
CTK2YJL006C UFD1P53044 361 aa2.36□□□□□ -2.03
CTK2YJL006C YNL040WP53960 456 aaPredicted RBP2.36□□□□□ -2.03
CTK2YJL006C CSI1Q04368 295 aa2.36□□□□□ -2.03
CTK2YJL006C YDR222WQ04925 415 aa2.36□□□□□ -2.03
CTK2YJL006C DXO1Q06349 442 aa2.36□□□□□ -2.03
CTK2YJL006C YPL278CQ08990 100 aa2.36□□□□□ -2.03
CTK2YJL006C YPR063CQ12160 140 aa2.36□□□□□ -2.03
CTK2YJL006C RRP42Q12277 265 aaPredicted RBP2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms