RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC43	YGL155W	FUN19	P28003	413 aa	Predicted RBP	4.94	□□□□□ -1.62
CDC43	YGL155W	YEF1	P32622	495 aa		4.94	□□□□□ -1.62
CDC43	YGL155W	LST4	P34239	828 aa		4.94	□□□□□ -1.62
CDC43	YGL155W	SFK1	P35735	353 aa		4.94	□□□□□ -1.62
CDC43	YGL155W	VBA2	P38358	474 aa	Known RBP	4.94	□□□□□ -1.62
CDC43	YGL155W	TRR2	P38816	342 aa		4.94	□□□□□ -1.62
CDC43	YGL155W	PHO90	P39535	881 aa		4.94	□□□□□ -1.62
CDC43	YGL155W	PRP39	P39682	629 aa	Known RBP	4.94	□□□□□ -1.62
CDC43	YGL155W	PMT6	P42934	759 aa		4.94	□□□□□ -1.62
CDC43	YGL155W	COQ5	P49017	307 aa		4.94	□□□□□ -1.62
CDC43	YGL155W	TOS2	P50078	622 aa		4.94	□□□□□ -1.62
CDC43	YGL155W	DOC1	P53068	250 aa		4.94	□□□□□ -1.62
CDC43	YGL155W	NPY1	P53164	384 aa		4.94	□□□□□ -1.62
CDC43	YGL155W	JAC1	P53193	184 aa		4.94	□□□□□ -1.62
CDC43	YGL155W	SAY1	P53324	424 aa		4.94	□□□□□ -1.62
CDC43	YGL155W	REC102	Q02721	264 aa		4.94	□□□□□ -1.62
CDC43	YGL155W	YDR541C	Q03049	344 aa		4.94	□□□□□ -1.62
CDC43	YGL155W	SIZ1	Q04195	904 aa		4.94	□□□□□ -1.62
CDC43	YGL155W	YML096W	Q04489	525 aa		4.94	□□□□□ -1.62
CDC43	YGL155W	YMR252C	Q04814	134 aa		4.94	□□□□□ -1.62
CDC43	YGL155W	SNO4	Q04902	237 aa		4.94	□□□□□ -1.62
CDC43	YGL155W	YPR127W	Q06494	345 aa		4.94	□□□□□ -1.62
CDC43	YGL155W	CDA2	Q06703	312 aa		4.94	□□□□□ -1.62
CDC43	YGL155W	YPR091C	Q06833	770 aa		4.94	□□□□□ -1.62
CDC43	YGL155W	BRX1	Q08235	291 aa	Known RBP	4.94	□□□□□ -1.62
CDC43	YGL155W	SYC1	Q08553	188 aa	Predicted RBP	4.94	□□□□□ -1.62
CDC43	YGL155W	HSP33	Q08914	237 aa	Known RBP	4.94	□□□□□ -1.62
CDC43	YGL155W	HSP32	Q08992	237 aa		4.94	□□□□□ -1.62
CDC43	YGL155W	YOL107W	Q12239	342 aa		4.94	□□□□□ -1.62
CDC43	YGL155W	KIN28	P06242	306 aa		4.93	□□□□□ -1.62
CDC43	YGL155W	ARG80	P07249	177 aa		4.93	□□□□□ -1.62
CDC43	YGL155W	CDC34	P14682	295 aa		4.93	□□□□□ -1.62
CDC43	YGL155W	PTP1	P25044	335 aa		4.93	□□□□□ -1.62
CDC43	YGL155W	BOS1	P25385	244 aa		4.93	□□□□□ -1.62
CDC43	YGL155W	CAM1	P29547	415 aa	Known RBP	4.93	□□□□□ -1.62
CDC43	YGL155W	ATS1	P31386	333 aa		4.93	□□□□□ -1.62
CDC43	YGL155W	BET3	P36149	193 aa		4.93	□□□□□ -1.62
CDC43	YGL155W	RRP4	P38792	359 aa	Known RBP	4.93	□□□□□ -1.62
CDC43	YGL155W	FET3	P38993	636 aa		4.93	□□□□□ -1.62
CDC43	YGL155W	FAA3	P39002	694 aa		4.93	□□□□□ -1.62
CDC43	YGL155W	SMB1	P40018	196 aa	Known RBP	4.93	□□□□□ -1.62
CDC43	YGL155W	SMK1	P41808	388 aa		4.93	□□□□□ -1.62
CDC43	YGL155W	OYE3	P41816	400 aa	Predicted RBP	4.93	□□□□□ -1.62
CDC43	YGL155W	ZIM17	P42844	174 aa		4.93	□□□□□ -1.62
CDC43	YGL155W	MTL1	P53214	551 aa		4.93	□□□□□ -1.62
CDC43	YGL155W	OGG1	P53397	376 aa	Predicted RBP	4.93	□□□□□ -1.62
CDC43	YGL155W	NCE103	P53615	221 aa		4.93	□□□□□ -1.62
CDC43	YGL155W	DLT1	Q04216	342 aa		4.93	□□□□□ -1.62
CDC43	YGL155W	UTP15	Q04305	513 aa	Known RBP	4.93	□□□□□ -1.62
CDC43	YGL155W	AIM6	Q07716	390 aa		4.93	□□□□□ -1.62
CDC43	YGL155W	YLR031W	Q07978	186 aa		4.93	□□□□□ -1.62
CDC43	YGL155W	IRC13	Q08630	104 aa		4.93	□□□□□ -1.62
CDC43	YGL155W	YOR378W	Q08902	515 aa		4.93	□□□□□ -1.62
CDC43	YGL155W	MMT2	Q08970	484 aa		4.93	□□□□□ -1.62
CDC43	YGL155W	AEP3	Q12089	606 aa		4.93	□□□□□ -1.62
CDC43	YGL155W	ATP16	Q12165	160 aa		4.93	□□□□□ -1.62
CDC43	YGL155W	NAG1	Q8TGN9	163 aa		4.93	□□□□□ -1.62
CDC43	YGL155W	SOD2	P00447	233 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	RPS14A	P06367	137 aa	Known RBP	4.92	□□□□□ -1.62
CDC43	YGL155W	HIS5	P07172	385 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	HOM3	P10869	527 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	YCL002C	P25565	263 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	PRO1	P32264	428 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	YMC1	P32331	307 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	MDL1	P33310	695 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	GPX1	P36014	167 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	CHK1	P38147	527 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	MAL32	P38158	584 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	COS8	P38723	381 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	YHR122W	P38829	231 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	RPS14B	P39516	138 aa	Known RBP	4.92	□□□□□ -1.62
CDC43	YGL155W	TIR3	P40552	269 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	CAT5	P41735	233 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	CCC1	P47818	322 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	GNP1	P48813	663 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	YGL204C	P53089	101 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	MAL12	P53341	584 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	TIM44	Q01852	431 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	EGD1	Q02642	157 aa	Known RBP	4.92	□□□□□ -1.62
CDC43	YGL155W	KAP120	Q02932	1032 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	VBA1	Q04301	562 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	HLR1	Q04429	423 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	SMA2	Q04658	369 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	UTP21	Q06078	939 aa	Predicted RBP	4.92	□□□□□ -1.62
CDC43	YGL155W	KEI1	Q06346	221 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	CYK3	Q07533	885 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	RSC58	Q07979	502 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	FMP40	Q08968	688 aa	Predicted RBP	4.92	□□□□□ -1.62
CDC43	YGL155W	SRO7	Q12038	1033 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	INP53	Q12271	1107 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	TRM13	Q12383	476 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	AHC1	Q12433	566 aa		4.92	□□□□□ -1.62
CDC43	YGL155W	BAR1	P12630	587 aa		4.91	□□□□□ -1.62
CDC43	YGL155W	RPL3	P14126	387 aa	Known RBP	4.91	□□□□□ -1.62
CDC43	YGL155W	PRP2	P20095	876 aa	Predicted RBP	4.91	□□□□□ -1.62
CDC43	YGL155W	CKS1	P20486	150 aa	Known RBP	4.91	□□□□□ -1.62
CDC43	YGL155W	YCP4	P25349	247 aa	Known RBP	4.91	□□□□□ -1.62
CDC43	YGL155W	HCM1	P25364	564 aa		4.91	□□□□□ -1.62
CDC43	YGL155W	PBN1	P25580	416 aa		4.91	□□□□□ -1.62
CDC43	YGL155W	CPR3	P25719	182 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms