RNA–Protein interactions for RNA: YFL047W

RGD2, Transcript of GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p, yeastyeast

Gene RGD2, Length 2,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD2YFL047W HXT11P54862 567 aa6.11□□□□□ -1.43
RGD2YFL047W PEX30Q06169 523 aa6.11□□□□□ -1.43
RGD2YFL047W YOR378WQ08902 515 aa6.11□□□□□ -1.43
RGD2YFL047W AEP3Q12089 606 aa6.11□□□□□ -1.43
RGD2YFL047W LYS21Q12122 440 aaKnown RBP6.11□□□□□ -1.43
RGD2YFL047W GAL4P04386 881 aa6.1□□□□□ -1.43
RGD2YFL047W RNQ1P25367 405 aa6.1□□□□□ -1.43
RGD2YFL047W CNE1P27825 502 aa6.1□□□□□ -1.43
RGD2YFL047W CDC13P32797 924 aaKnown RBP6.1□□□□□ -1.43
RGD2YFL047W GRE3P38715 327 aaKnown RBP RIP-Chip data6.1□□□□□ -1.43not detected
RGD2YFL047W VPS52P39904 641 aa6.1□□□□□ -1.43
RGD2YFL047W YIL108WP40483 696 aaKnown RBP6.1□□□□□ -1.43
RGD2YFL047W YIL060WP40519 144 aa6.1□□□□□ -1.43
RGD2YFL047W VHT1P53241 593 aa6.1□□□□□ -1.43
RGD2YFL047W KAP120Q02932 1032 aa6.1□□□□□ -1.43
RGD2YFL047W SIZ1Q04195 904 aa6.1□□□□□ -1.43
RGD2YFL047W TY1A-MR1Q04215 440 aa6.1□□□□□ -1.43
RGD2YFL047W UTP15Q04305 513 aaKnown RBP6.1□□□□□ -1.43
RGD2YFL047W SMA2Q04658 369 aa6.1□□□□□ -1.43
RGD2YFL047W DCR2Q05924 578 aa6.1□□□□□ -1.43
RGD2YFL047W RSC58Q07979 502 aa6.1□□□□□ -1.43
RGD2YFL047W YOR365CQ08844 703 aa6.1□□□□□ -1.43
RGD2YFL047W GUP2Q08929 609 aa6.1□□□□□ -1.43
RGD2YFL047W FMP40Q08968 688 aaPredicted RBP6.1□□□□□ -1.43
RGD2YFL047W LEU9Q12166 604 aaKnown RBP6.1□□□□□ -1.43
RGD2YFL047W TY1A-BLQ12266 440 aa6.1□□□□□ -1.43
RGD2YFL047W GLO4Q12320 285 aa6.1□□□□□ -1.43
RGD2YFL047W GPI12P23797 304 aa6.1□□□□□ -1.43
RGD2YFL047W YCR061WP25639 631 aa6.1□□□□□ -1.43
RGD2YFL047W CAM1P29547 415 aaKnown RBP6.1□□□□□ -1.43
RGD2YFL047W PHO90P39535 881 aa6.1□□□□□ -1.43
RGD2YFL047W SAM37P50110 327 aa6.1□□□□□ -1.43
RGD2YFL047W RNH70P53331 553 aa6.1□□□□□ -1.43
RGD2YFL047W YDR249CQ03787 373 aa6.1□□□□□ -1.43
RGD2YFL047W YPR091CQ06833 770 aa6.1□□□□□ -1.43
RGD2YFL047W AIM6Q07716 390 aa6.1□□□□□ -1.43
RGD2YFL047W FEX2Q08991 375 aa6.1□□□□□ -1.43
RGD2YFL047W CET1O13297 549 aaPredicted RBP6.09□□□□□ -1.43
RGD2YFL047W PRB1P09232 635 aa6.09□□□□□ -1.43
RGD2YFL047W BET2P20133 325 aa6.09□□□□□ -1.43
RGD2YFL047W CPR3P25719 182 aa6.09□□□□□ -1.43
RGD2YFL047W SDS24P38314 527 aa6.09□□□□□ -1.43
RGD2YFL047W OCA5P38738 679 aa6.09□□□□□ -1.43
RGD2YFL047W YGL204CP53089 101 aa6.09□□□□□ -1.43
RGD2YFL047W BUD25P85052 153 aa6.09□□□□□ -1.43
RGD2YFL047W TY1A-DR2Q03964 440 aaKnown RBP6.09□□□□□ -1.43
RGD2YFL047W BTS1Q12051 335 aa6.09□□□□□ -1.43
RGD2YFL047W RTC5Q12108 567 aaKnown RBP6.09□□□□□ -1.43
RGD2YFL047W NPC2Q12408 173 aa6.09□□□□□ -1.43
RGD2YFL047W YHR213W-AQ8TGT4 77 aa6.09□□□□□ -1.43
RGD2YFL047W AI1P03875 834 aa6.08□□□□□ -1.44
RGD2YFL047W PUT1P09368 476 aa6.08□□□□□ -1.44
RGD2YFL047W NAM9P27929 486 aa6.08□□□□□ -1.44
RGD2YFL047W MDH3P32419 343 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
RGD2YFL047W MKS1P34072 584 aa6.08□□□□□ -1.44
RGD2YFL047W AIM46P38885 310 aa6.08□□□□□ -1.44
RGD2YFL047W PAC1P39946 494 aaKnown RBP6.08□□□□□ -1.44
RGD2YFL047W LSM1P47017 172 aaKnown RBP6.08□□□□□ -1.44
RGD2YFL047W TAD2P47058 250 aa6.08□□□□□ -1.44
RGD2YFL047W YGR042WP53227 271 aa6.08□□□□□ -1.44
RGD2YFL047W MAG1P22134 296 aaKnown RBP6.08□□□□□ -1.44
RGD2YFL047W CNB1P25296 175 aa6.08□□□□□ -1.44
RGD2YFL047W PBN1P25580 416 aa6.08□□□□□ -1.44
RGD2YFL047W CHK1P38147 527 aa6.08□□□□□ -1.44
RGD2YFL047W PRP39P39682 629 aaKnown RBP6.08□□□□□ -1.44
RGD2YFL047W LSB3P43603 459 aaKnown RBP6.08□□□□□ -1.44
RGD2YFL047W ALK1P43633 760 aaKnown RBP6.08□□□□□ -1.44
RGD2YFL047W TIM44Q01852 431 aa6.08□□□□□ -1.44
RGD2YFL047W YPR172WQ06608 200 aa6.08□□□□□ -1.44
RGD2YFL047W HDA2Q06629 674 aa6.08□□□□□ -1.44
RGD2YFL047W IRC13Q08630 104 aa6.08□□□□□ -1.44
RGD2YFL047W FSH3Q99369 266 aa6.08□□□□□ -1.44
RGD2YFL047W FUS3P16892 353 aaKnown RBP6.07□□□□□ -1.44
RGD2YFL047W MRP17P28778 131 aa6.07□□□□□ -1.44
RGD2YFL047W CBT1P36038 271 aaPredicted RBP6.07□□□□□ -1.44
RGD2YFL047W YNL208WP40159 199 aaKnown RBP6.07□□□□□ -1.44
RGD2YFL047W YMR144WP40214 342 aaKnown RBP6.07□□□□□ -1.44
RGD2YFL047W TIF34P40217 347 aaKnown RBP6.07□□□□□ -1.44
RGD2YFL047W LEM3P42838 414 aa6.07□□□□□ -1.44
RGD2YFL047W SLS1P42900 643 aa6.07□□□□□ -1.44
RGD2YFL047W UBX6P47049 396 aa6.07□□□□□ -1.44
RGD2YFL047W TYW3P53177 273 aa6.07□□□□□ -1.44
RGD2YFL047W NAM8Q00539 523 aaKnown RBP6.07□□□□□ -1.44
RGD2YFL047W LAP3Q01532 483 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
RGD2YFL047W HPF1Q05164 967 aa6.07□□□□□ -1.44
RGD2YFL047W HRT1Q08273 121 aa6.07□□□□□ -1.44
RGD2YFL047W ATP16Q12165 160 aa6.07□□□□□ -1.44
RGD2YFL047W TY1A-DR3Q12441 440 aa6.07□□□□□ -1.44
RGD2YFL047W SKM1Q12469 655 aa6.07□□□□□ -1.44
RGD2YFL047W RPL20AP0CX23 172 aaKnown RBP6.07□□□□□ -1.44
RGD2YFL047W RPL20BP0CX24 172 aaPredicted RBP6.07□□□□□ -1.44
RGD2YFL047W GAS1P22146 559 aaKnown RBP6.07□□□□□ -1.44
RGD2YFL047W PTP1P25044 335 aa6.07□□□□□ -1.44
RGD2YFL047W SUA5P32579 426 aa6.07□□□□□ -1.44
RGD2YFL047W EMP24P32803 203 aaKnown RBP6.07□□□□□ -1.44
RGD2YFL047W SPT23P35210 1082 aa6.07□□□□□ -1.44
RGD2YFL047W YKL071WP36086 256 aa6.07□□□□□ -1.44
RGD2YFL047W BET3P36149 193 aa6.07□□□□□ -1.44
RGD2YFL047W YBR238CP38330 731 aaKnown RBP6.07□□□□□ -1.44
RGD2YFL047W WSC4P38739 605 aa6.07□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms