RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W ELP3Q02908 557 aaKnown RBP4.31□□□□□ -1.72
UBC6YER100W ENT5Q03769 411 aaKnown RBP4.31□□□□□ -1.72
UBC6YER100W SPO77Q06134 477 aa4.31□□□□□ -1.72
UBC6YER100W IRC25Q07951 179 aa4.31□□□□□ -1.72
UBC6YER100W PLP2Q12017 286 aa4.31□□□□□ -1.72
UBC6YER100W SME1Q12330 94 aaPredicted RBP4.31□□□□□ -1.72
UBC6YER100W NCB2Q92317 146 aa4.31□□□□□ -1.72
UBC6YER100W MATALPHA1P0CY06 175 aa4.3□□□□□ -1.72
UBC6YER100W HMLALPHA1P0CY07 175 aa4.3□□□□□ -1.72
UBC6YER100W REV1P12689 985 aa4.3□□□□□ -1.72
UBC6YER100W PBN1P25580 416 aa4.3□□□□□ -1.72
UBC6YER100W URA10P30402 227 aa4.3□□□□□ -1.72
UBC6YER100W CSE2P33308 149 aa4.3□□□□□ -1.72
UBC6YER100W SHC1P39000 512 aa4.3□□□□□ -1.72
UBC6YER100W RPL10P41805 221 aaKnown RBP4.3□□□□□ -1.72
UBC6YER100W EGT2P42835 1041 aa4.3□□□□□ -1.72
UBC6YER100W SKI8Q02793 397 aaPredicted RBP4.3□□□□□ -1.72
UBC6YER100W YMR317WQ04893 1140 aa4.3□□□□□ -1.72
UBC6YER100W SSQ1Q05931 657 aaPredicted RBP4.3□□□□□ -1.72
UBC6YER100W GIS3Q12418 502 aa4.3□□□□□ -1.72
UBC6YER100W IZH2Q12442 317 aa4.3□□□□□ -1.72
UBC6YER100W NAG1Q8TGN9 163 aa4.3□□□□□ -1.72
UBC6YER100W CDC36P06100 191 aaPredicted RBP4.29□□□□□ -1.72
UBC6YER100W SPS100P13130 326 aa4.29□□□□□ -1.72
UBC6YER100W RNA15P25299 296 aaPredicted RBP4.29□□□□□ -1.72
UBC6YER100W INO2P26798 304 aa4.29□□□□□ -1.72
UBC6YER100W PPA2P28239 310 aa4.29□□□□□ -1.72
UBC6YER100W IES6P32617 166 aa4.29□□□□□ -1.72
UBC6YER100W SPT4P32914 102 aaPredicted RBP4.29□□□□□ -1.72
UBC6YER100W YBL059WP34224 193 aa4.29□□□□□ -1.72
UBC6YER100W YKL187CP34231 750 aa4.29□□□□□ -1.72
UBC6YER100W PFS1P38872 237 aa4.29□□□□□ -1.72
UBC6YER100W RPC17P47076 161 aa4.29□□□□□ -1.72
UBC6YER100W IBA57P47158 497 aa4.29□□□□□ -1.72
UBC6YER100W CRH1P53301 507 aa4.29□□□□□ -1.72
UBC6YER100W CDC14Q00684 551 aa4.29□□□□□ -1.72
UBC6YER100W PRP38Q00723 242 aaPredicted RBP4.29□□□□□ -1.72
UBC6YER100W SLT2Q00772 484 aa4.29□□□□□ -1.72
UBC6YER100W SCS7Q03529 384 aa4.29□□□□□ -1.72
UBC6YER100W BNA7Q04066 261 aa4.29□□□□□ -1.72
UBC6YER100W HRI1Q05905 244 aaKnown RBP4.29□□□□□ -1.72
UBC6YER100W SFH1Q06168 426 aa4.29□□□□□ -1.72
UBC6YER100W YPL245WQ12179 454 aaKnown RBP4.29□□□□□ -1.72
UBC6YER100W STE7P06784 515 aa4.28□□□□□ -1.72
UBC6YER100W NHP6BP11633 99 aaKnown RBP4.28□□□□□ -1.72
UBC6YER100W ZRC1P20107 442 aa4.28□□□□□ -1.72
UBC6YER100W POF1P25576 258 aa4.28□□□□□ -1.72
UBC6YER100W SDS24P38314 527 aa4.28□□□□□ -1.72
UBC6YER100W PAN6P40459 309 aa4.28□□□□□ -1.72
UBC6YER100W YRB1P41920 201 aaKnown RBP4.28□□□□□ -1.72
UBC6YER100W HOC1P47124 396 aa4.28□□□□□ -1.72
UBC6YER100W BIR1P47134 954 aa4.28□□□□□ -1.72
UBC6YER100W TPN1P53099 579 aa4.28□□□□□ -1.72
UBC6YER100W TAZ1Q06510 381 aa4.28□□□□□ -1.72
UBC6YER100W LAG2Q92325 660 aa4.28□□□□□ -1.72
UBC6YER100W COQ1P18900 473 aa4.27□□□□□ -1.73
UBC6YER100W AEP1P32493 518 aa4.27□□□□□ -1.73
UBC6YER100W PEX22P39718 180 aa4.27□□□□□ -1.73
UBC6YER100W HEM14P40012 539 aa4.27□□□□□ -1.73
UBC6YER100W HIT1P46973 164 aa4.27□□□□□ -1.73
UBC6YER100W CDH1P53197 566 aa4.27□□□□□ -1.73
UBC6YER100W TPC1P53257 314 aa4.27□□□□□ -1.73
UBC6YER100W YNL040WP53960 456 aaPredicted RBP4.27□□□□□ -1.73
UBC6YER100W RNY1Q02933 434 aaKnown RBP4.27□□□□□ -1.73
UBC6YER100W TAF9Q05027 157 aa4.27□□□□□ -1.73
UBC6YER100W CTR3Q06686 241 aa4.27□□□□□ -1.73
UBC6YER100W PER33Q12144 273 aa4.27□□□□□ -1.73
UBC6YER100W SNF8Q12483 233 aa4.27□□□□□ -1.73
UBC6YER100W BI3Q9ZZW7 517 aa4.27□□□□□ -1.73
UBC6YER100W MHP1P43638 1398 aa4.27□□□□□ -1.73
UBC6YER100W RPP0P05317 312 aaKnown RBP4.26□□□□□ -1.73
UBC6YER100W MER1P16523 270 aa4.26□□□□□ -1.73
UBC6YER100W VMA6P32366 345 aaKnown RBP4.26□□□□□ -1.73
UBC6YER100W SHE1P38200 338 aa4.26□□□□□ -1.73
UBC6YER100W PET8P38921 284 aa4.26□□□□□ -1.73
UBC6YER100W VAB2P40003 282 aa4.26□□□□□ -1.73
UBC6YER100W THO1P40040 218 aaKnown RBP4.26□□□□□ -1.73
UBC6YER100W DSN1P40568 576 aa4.26□□□□□ -1.73
UBC6YER100W GLG2P47011 380 aa4.26□□□□□ -1.73
UBC6YER100W YJR054WP47114 497 aa4.26□□□□□ -1.73
UBC6YER100W GMC1Q04399 608 aa4.26□□□□□ -1.73
UBC6YER100W PEX30Q06169 523 aa4.26□□□□□ -1.73
UBC6YER100W YOR114WQ12219 294 aa4.26□□□□□ -1.73
UBC6YER100W RPS14AP06367 137 aaKnown RBP4.25□□□□□ -1.73
UBC6YER100W RHO1P06780 209 aaKnown RBP4.25□□□□□ -1.73
UBC6YER100W TPS2P31688 896 aaKnown RBP4.25□□□□□ -1.73
UBC6YER100W MAL32P38158 584 aa4.25□□□□□ -1.73
UBC6YER100W EFM1P38732 585 aa4.25□□□□□ -1.73
UBC6YER100W RPS14BP39516 138 aaKnown RBP4.25□□□□□ -1.73
UBC6YER100W YER184CP39961 794 aa4.25□□□□□ -1.73
UBC6YER100W YJR012CP47087 207 aa4.25□□□□□ -1.73
UBC6YER100W HAM1P47119 197 aaKnown RBP4.25□□□□□ -1.73
UBC6YER100W YGR015CP53208 328 aa4.25□□□□□ -1.73
UBC6YER100W MAL13P53338 473 aa4.25□□□□□ -1.73
UBC6YER100W MAL12P53341 584 aa4.25□□□□□ -1.73
UBC6YER100W YDR209CQ03480 137 aa4.25□□□□□ -1.73
UBC6YER100W YML018CQ03730 393 aa4.25□□□□□ -1.73
UBC6YER100W DPP1Q05521 289 aa4.25□□□□□ -1.73
UBC6YER100W SEC10Q06245 871 aa4.25□□□□□ -1.73
UBC6YER100W YPR172WQ06608 200 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms