RNA–Protein interactions for RNA: YDR478W

SNM1, Transcript of Ribonuclease MRP complex subunit, yeast

Gene SNM1, Length 597 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNM1	YDR478W	FMP46	P36141	133 aa	Known RBP	4.25	□□□□□ -1.73
SNM1	YDR478W	HEM14	P40012	539 aa		4.25	□□□□□ -1.73
SNM1	YDR478W	YAT2	P40017	923 aa		4.25	□□□□□ -1.73
SNM1	YDR478W	YER034W	P40022	185 aa	Known RBP	4.25	□□□□□ -1.73
SNM1	YDR478W	RAD17	P48581	401 aa		4.25	□□□□□ -1.73
SNM1	YDR478W	PRP38	Q00723	242 aa	Predicted RBP	4.25	□□□□□ -1.73
SNM1	YDR478W	SKI8	Q02793	397 aa	Predicted RBP	4.25	□□□□□ -1.73
SNM1	YDR478W	YDR209C	Q03480	137 aa		4.25	□□□□□ -1.73
SNM1	YDR478W	GTO3	Q04806	366 aa		4.25	□□□□□ -1.73
SNM1	YDR478W	FAR10	Q06001	478 aa		4.25	□□□□□ -1.73
SNM1	YDR478W	CTR3	Q06686	241 aa		4.25	□□□□□ -1.73
SNM1	YDR478W	FDH1	Q08911	376 aa		4.25	□□□□□ -1.73
SNM1	YDR478W	MSH5	Q12175	901 aa		4.25	□□□□□ -1.73
SNM1	YDR478W	LAG2	Q92325	660 aa		4.25	□□□□□ -1.73
SNM1	YDR478W	MRPL20	P22354	195 aa	Predicted RBP	4.24	□□□□□ -1.73
SNM1	YDR478W	AAT2	P23542	418 aa	Known RBP	4.24	□□□□□ -1.73
SNM1	YDR478W	IES6	P32617	166 aa		4.24	□□□□□ -1.73
SNM1	YDR478W	MRPL6	P32904	214 aa		4.24	□□□□□ -1.73
SNM1	YDR478W	CHL4	P38907	458 aa		4.24	□□□□□ -1.73
SNM1	YDR478W	SHC1	P39000	512 aa		4.24	□□□□□ -1.73
SNM1	YDR478W	AIM10	P39965	576 aa	Known RBP	4.24	□□□□□ -1.73
SNM1	YDR478W	NRM1	P53718	249 aa		4.24	□□□□□ -1.73
SNM1	YDR478W	KTR6	P54070	446 aa		4.24	□□□□□ -1.73
SNM1	YDR478W	GMC1	Q04399	608 aa		4.24	□□□□□ -1.73
SNM1	YDR478W	KRE28	Q04431	385 aa		4.24	□□□□□ -1.73
SNM1	YDR478W	YLR446W	Q06204	433 aa		4.24	□□□□□ -1.73
SNM1	YDR478W	YPL245W	Q12179	454 aa	Known RBP	4.24	□□□□□ -1.73
SNM1	YDR478W	MCT1	Q12283	360 aa		4.24	□□□□□ -1.73
SNM1	YDR478W	YBL111C	Q3E7Y5	667 aa		4.24	□□□□□ -1.73
SNM1	YDR478W	ARG80	P07249	177 aa		4.23	□□□□□ -1.73
SNM1	YDR478W	REV1	P12689	985 aa		4.23	□□□□□ -1.73
SNM1	YDR478W	AIM29	P36154	155 aa		4.23	□□□□□ -1.73
SNM1	YDR478W	LDB7	P38210	180 aa		4.23	□□□□□ -1.73
SNM1	YDR478W	PRS2	P38620	318 aa	Known RBP	4.23	□□□□□ -1.73
SNM1	YDR478W	RCK1	P38622	512 aa		4.23	□□□□□ -1.73
SNM1	YDR478W	OXA1	P39952	402 aa		4.23	□□□□□ -1.73
SNM1	YDR478W	YPT32	P51996	222 aa	Known RBP	4.23	□□□□□ -1.73
SNM1	YDR478W	CDH1	P53197	566 aa		4.23	□□□□□ -1.73
SNM1	YDR478W	SFH1	Q06168	426 aa		4.23	□□□□□ -1.73
SNM1	YDR478W	NDD1	Q08887	554 aa		4.23	□□□□□ -1.73
SNM1	YDR478W	PER33	Q12144	273 aa		4.23	□□□□□ -1.73
SNM1	YDR478W	GIS3	Q12418	502 aa		4.23	□□□□□ -1.73
SNM1	YDR478W	YOS9	Q99220	542 aa		4.23	□□□□□ -1.73
SNM1	YDR478W	MATALPHA1	P0CY06	175 aa		4.22	□□□□□ -1.73
SNM1	YDR478W	HMLALPHA1	P0CY07	175 aa		4.22	□□□□□ -1.73
SNM1	YDR478W	RNA15	P25299	296 aa	Predicted RBP	4.22	□□□□□ -1.73
SNM1	YDR478W	POF1	P25576	258 aa		4.22	□□□□□ -1.73
SNM1	YDR478W	NAM9	P27929	486 aa		4.22	□□□□□ -1.73
SNM1	YDR478W	PPA2	P28239	310 aa		4.22	□□□□□ -1.73
SNM1	YDR478W	SOL2	P37262	315 aa		4.22	□□□□□ -1.73
SNM1	YDR478W	BMT2	P38278	337 aa		4.22	□□□□□ -1.73
SNM1	YDR478W	SDS24	P38314	527 aa		4.22	□□□□□ -1.73
SNM1	YDR478W	PET8	P38921	284 aa		4.22	□□□□□ -1.73
SNM1	YDR478W	ALD5	P40047	520 aa	Known RBP	4.22	□□□□□ -1.73
SNM1	YDR478W	ASG7	P46993	209 aa		4.22	□□□□□ -1.73
SNM1	YDR478W	YGL260W	P53056	76 aa		4.22	□□□□□ -1.73
SNM1	YDR478W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
SNM1	YDR478W	RNH201	P53942	307 aa		4.22	□□□□□ -1.73
SNM1	YDR478W	TRM44	Q02648	567 aa	Known RBP	4.22	□□□□□ -1.73
SNM1	YDR478W	ENT5	Q03769	411 aa	Known RBP	4.22	□□□□□ -1.73
SNM1	YDR478W	DPP1	Q05521	289 aa		4.22	□□□□□ -1.73
SNM1	YDR478W	TAZ1	Q06510	381 aa		4.22	□□□□□ -1.73
SNM1	YDR478W	RPL24B	P24000	155 aa	Known RBP	4.21	□□□□□ -1.74
SNM1	YDR478W	YBR241C	P38142	488 aa		4.21	□□□□□ -1.74
SNM1	YDR478W	RFS1	P38234	210 aa	Known RBP	4.21	□□□□□ -1.74
SNM1	YDR478W	SIP3	P38717	1229 aa		4.21	□□□□□ -1.74
SNM1	YDR478W	WSC4	P38739	605 aa		4.21	□□□□□ -1.74
SNM1	YDR478W	PFS1	P38872	237 aa		4.21	□□□□□ -1.74
SNM1	YDR478W	KRE9	P39005	276 aa		4.21	□□□□□ -1.74
SNM1	YDR478W	RPL10	P41805	221 aa	Known RBP	4.21	□□□□□ -1.74
SNM1	YDR478W	HIT1	P46973	164 aa		4.21	□□□□□ -1.74
SNM1	YDR478W	YJR012C	P47087	207 aa		4.21	□□□□□ -1.74
SNM1	YDR478W	YJR054W	P47114	497 aa		4.21	□□□□□ -1.74
SNM1	YDR478W	BNA7	Q04066	261 aa		4.21	□□□□□ -1.74
SNM1	YDR478W	YET2	Q04210	160 aa		4.21	□□□□□ -1.74
SNM1	YDR478W	PEX30	Q06169	523 aa		4.21	□□□□□ -1.74
SNM1	YDR478W	SMD2	Q06217	110 aa	Known RBP	4.21	□□□□□ -1.74
SNM1	YDR478W	YLR177W	Q06251	628 aa		4.21	□□□□□ -1.74
SNM1	YDR478W	VIK1	Q12045	647 aa		4.21	□□□□□ -1.74
SNM1	YDR478W	BI3	Q9ZZW7	517 aa		4.21	□□□□□ -1.74
SNM1	YDR478W	NHP6B	P11633	99 aa	Known RBP	4.2	□□□□□ -1.74
SNM1	YDR478W	CMK2	P22517	447 aa		4.2	□□□□□ -1.74
SNM1	YDR478W	MRPL10	P36520	322 aa		4.2	□□□□□ -1.74
SNM1	YDR478W	MRX3	P38172	270 aa		4.2	□□□□□ -1.74
SNM1	YDR478W	PEX31	P53203	462 aa		4.2	□□□□□ -1.74
SNM1	YDR478W	YGR015C	P53208	328 aa		4.2	□□□□□ -1.74
SNM1	YDR478W	TPC1	P53257	314 aa		4.2	□□□□□ -1.74
SNM1	YDR478W	GIM3	P53900	129 aa		4.2	□□□□□ -1.74
SNM1	YDR478W	TAF9	Q05027	157 aa		4.2	□□□□□ -1.74
SNM1	YDR478W	SSQ1	Q05931	657 aa	Predicted RBP	4.2	□□□□□ -1.74
SNM1	YDR478W	CSM4	Q08955	156 aa		4.2	□□□□□ -1.74
SNM1	YDR478W	STH1	P32597	1359 aa		4.19	□□□□□ -1.74
SNM1	YDR478W	CDC50	P25656	391 aa		4.19	□□□□□ -1.74
SNM1	YDR478W	MAL32	P38158	584 aa		4.19	□□□□□ -1.74
SNM1	YDR478W	EFM1	P38732	585 aa		4.19	□□□□□ -1.74
SNM1	YDR478W	BAT1	P38891	393 aa	Known RBP	4.19	□□□□□ -1.74
SNM1	YDR478W	THO1	P40040	218 aa	Known RBP	4.19	□□□□□ -1.74
SNM1	YDR478W	MAL12	P53341	584 aa		4.19	□□□□□ -1.74
SNM1	YDR478W	YNL040W	P53960	456 aa	Predicted RBP	4.19	□□□□□ -1.74
SNM1	YDR478W	SCS7	Q03529	384 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms