RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W TY1A-JR1P0CX74 440 aa1.53□□□□□ -2.16
CFT1YDR301W TY1A-LR3P0CX75 440 aa1.53□□□□□ -2.16
CFT1YDR301W TY1A-ML2P0CX76 440 aa1.53□□□□□ -2.16
CFT1YDR301W HEM13P11353 328 aaKnown RBP1.53□□□□□ -2.16
CFT1YDR301W PET9P18239 318 aaKnown RBP1.53□□□□□ -2.16
CFT1YDR301W AIM17P23180 465 aaKnown RBP1.53□□□□□ -2.16
CFT1YDR301W BUD5P25300 642 aaPredicted RBP1.53□□□□□ -2.16
CFT1YDR301W NAM9P27929 486 aa1.53□□□□□ -2.16
CFT1YDR301W DBF20P32328 564 aa1.53□□□□□ -2.16
CFT1YDR301W PAD1P33751 242 aaKnown RBP RIP-Chip data1.53□□□□□ -2.16not detected
CFT1YDR301W VBA2P38358 474 aaKnown RBP1.53□□□□□ -2.16
CFT1YDR301W FET3P38993 636 aa1.53□□□□□ -2.16
CFT1YDR301W PDS1P40316 373 aaPredicted RBP1.53□□□□□ -2.16
CFT1YDR301W GCN20P43535 752 aaKnown RBP1.53□□□□□ -2.16
CFT1YDR301W ARO8P53090 500 aaKnown RBP1.53□□□□□ -2.16
CFT1YDR301W PAU12P53343 120 aa1.53□□□□□ -2.16
CFT1YDR301W MNT4P53745 580 aa1.53□□□□□ -2.16
CFT1YDR301W YKR011CQ02209 353 aa1.53□□□□□ -2.16
CFT1YDR301W CGI121Q03705 181 aaKnown RBP1.53□□□□□ -2.16
CFT1YDR301W MGR3Q04472 501 aa1.53□□□□□ -2.16
CFT1YDR301W VPS36Q06696 566 aa1.53□□□□□ -2.16
CFT1YDR301W FMP45Q07651 309 aa1.53□□□□□ -2.16
CFT1YDR301W RRG7Q08774 242 aaPredicted RBP1.53□□□□□ -2.16
CFT1YDR301W TY1A-GR1Q12085 440 aa1.53□□□□□ -2.16
CFT1YDR301W YPR071WQ12346 211 aa1.53□□□□□ -2.16
CFT1YDR301W TY1A-DR3Q12441 440 aa1.53□□□□□ -2.16
CFT1YDR301W PSF1Q12488 208 aa1.53□□□□□ -2.16
CFT1YDR301W TY1A-PR3Q6Q5H1 440 aaKnown RBP1.53□□□□□ -2.16
CFT1YDR301W TY1A-OLQ92392 440 aaKnown RBP1.53□□□□□ -2.16
CFT1YDR301W POL2P21951 2222 aaKnown RBP1.53□□□□□ -2.16
CFT1YDR301W PHO2P07269 559 aa1.53□□□□□ -2.17
CFT1YDR301W ERD2P18414 219 aa1.53□□□□□ -2.17
CFT1YDR301W YPK2P18961 677 aa1.53□□□□□ -2.17
CFT1YDR301W HXT2P23585 541 aa1.53□□□□□ -2.17
CFT1YDR301W YCR100CP25606 316 aa1.53□□□□□ -2.17
CFT1YDR301W HSP30P25619 332 aa1.53□□□□□ -2.17
CFT1YDR301W FUN19P28003 413 aaPredicted RBP1.53□□□□□ -2.17
CFT1YDR301W UBC8P28263 218 aa1.53□□□□□ -2.17
CFT1YDR301W SEF1P34228 1148 aa1.53□□□□□ -2.17
CFT1YDR301W UTP11P34247 250 aaPredicted RBP1.53□□□□□ -2.17
CFT1YDR301W TPO5P36029 618 aa1.53□□□□□ -2.17
CFT1YDR301W CHK1P38147 527 aa1.53□□□□□ -2.17
CFT1YDR301W AVT6P40074 448 aa1.53□□□□□ -2.17
CFT1YDR301W SOK1P40317 901 aa1.53□□□□□ -2.17
CFT1YDR301W GDS1P41913 522 aa1.53□□□□□ -2.17
CFT1YDR301W ALK1P43633 760 aaKnown RBP1.53□□□□□ -2.17
CFT1YDR301W UBX6P47049 396 aa1.53□□□□□ -2.17
CFT1YDR301W ECL1P48235 211 aa1.53□□□□□ -2.17
CFT1YDR301W TOS2P50078 622 aa1.53□□□□□ -2.17
CFT1YDR301W RAI1P53063 387 aaKnown RBP1.53□□□□□ -2.17
CFT1YDR301W TPS1Q00764 495 aaKnown RBP1.53□□□□□ -2.17
CFT1YDR301W SCS7Q03529 384 aa1.53□□□□□ -2.17
CFT1YDR301W AIM36Q03798 255 aa1.53□□□□□ -2.17
CFT1YDR301W YMR130WQ04223 302 aa1.53□□□□□ -2.17
CFT1YDR301W SEI1Q06058 285 aa1.53□□□□□ -2.17
CFT1YDR301W MCM21Q06675 368 aa1.53□□□□□ -2.17
CFT1YDR301W RSC58Q07979 502 aa1.53□□□□□ -2.17
CFT1YDR301W DCI1Q08558 271 aa1.53□□□□□ -2.17
CFT1YDR301W RDR1Q08904 546 aa1.53□□□□□ -2.17
CFT1YDR301W TMS1Q12116 473 aa1.53□□□□□ -2.17
CFT1YDR301W YDL177CQ12257 170 aa1.53□□□□□ -2.17
CFT1YDR301W PCL9Q12477 304 aa1.53□□□□□ -2.17
CFT1YDR301W GCN4P03069 281 aa1.52□□□□□ -2.17
CFT1YDR301W YGL041W-AP0C5N3 154 aa1.52□□□□□ -2.17
CFT1YDR301W MRP1P10662 321 aaKnown RBP1.52□□□□□ -2.17
CFT1YDR301W SAM35P14693 329 aa1.52□□□□□ -2.17
CFT1YDR301W GAR1P28007 205 aaKnown RBP1.52□□□□□ -2.17
CFT1YDR301W SAC1P32368 623 aaKnown RBP1.52□□□□□ -2.17
CFT1YDR301W GSH1P32477 678 aa1.52□□□□□ -2.17
CFT1YDR301W DOA4P32571 926 aa1.52□□□□□ -2.17
CFT1YDR301W THI2P38141 450 aa1.52□□□□□ -2.17
CFT1YDR301W MOH1P38191 138 aa1.52□□□□□ -2.17
CFT1YDR301W YBR137WP38276 179 aa1.52□□□□□ -2.17
CFT1YDR301W FCY21P40039 528 aa1.52□□□□□ -2.17
CFT1YDR301W LAS21P40367 830 aa1.52□□□□□ -2.17
CFT1YDR301W QRI7P43122 407 aa1.52□□□□□ -2.17
CFT1YDR301W MSY1P48527 492 aa1.52□□□□□ -2.17
CFT1YDR301W TRM9P49957 279 aa1.52□□□□□ -2.17
CFT1YDR301W SNF12P53628 566 aa1.52□□□□□ -2.17
CFT1YDR301W PDR16P53860 351 aaKnown RBP1.52□□□□□ -2.17
CFT1YDR301W YPL039WQ03080 316 aa1.52□□□□□ -2.17
CFT1YDR301W GAS2Q06135 555 aa1.52□□□□□ -2.17
CFT1YDR301W YLR173WQ06247 608 aa1.52□□□□□ -2.17
CFT1YDR301W YPR196WQ06595 470 aa1.52□□□□□ -2.17
CFT1YDR301W IRC19Q07843 230 aa1.52□□□□□ -2.17
CFT1YDR301W FRE3Q08905 711 aa1.52□□□□□ -2.17
CFT1YDR301W YDL176WQ12027 708 aa1.52□□□□□ -2.17
CFT1YDR301W RTC5Q12108 567 aaKnown RBP1.52□□□□□ -2.17
CFT1YDR301W BAG7Q12128 409 aa1.52□□□□□ -2.17
CFT1YDR301W YOL114CQ12322 202 aa1.52□□□□□ -2.17
CFT1YDR301W TRA1P38811 3744 aa1.52□□□□□ -2.17
CFT1YDR301W SCEIP03882 235 aa1.52□□□□□ -2.17
CFT1YDR301W ADE5,7P07244 802 aaKnown RBP1.52□□□□□ -2.17
CFT1YDR301W ARG80P07249 177 aa1.52□□□□□ -2.17
CFT1YDR301W CBP6P07253 162 aaPredicted RBP1.52□□□□□ -2.17
CFT1YDR301W STE12P13574 688 aa1.52□□□□□ -2.17
CFT1YDR301W MCM10P32354 571 aa1.52□□□□□ -2.17
CFT1YDR301W PUB1P32588 453 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17not detected
CFT1YDR301W SEC66P33754 206 aa1.52□□□□□ -2.17
CFT1YDR301W TAT1P38085 619 aa1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms