RNA–Protein interactions for RNA: YDR235W

PRP42, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP42, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP42YDR235W YHL044WP38727 235 aa0.42□□□□□ -2.34
PRP42YDR235W PES4P39684 611 aa0.42□□□□□ -2.34
PRP42YDR235W PCL7P40186 285 aa0.42□□□□□ -2.34
PRP42YDR235W SYS1P41544 203 aa0.42□□□□□ -2.34
PRP42YDR235W YFL064CP43540 174 aa0.42□□□□□ -2.34
PRP42YDR235W MNN5P46982 586 aa0.42□□□□□ -2.34
PRP42YDR235W DSK2P48510 373 aa0.42□□□□□ -2.34
PRP42YDR235W PRP24P49960 444 aaKnown RBP0.42□□□□□ -2.34
PRP42YDR235W RSM27P53305 110 aa0.42□□□□□ -2.34
PRP42YDR235W SSU72P53538 206 aaPredicted RBP0.42□□□□□ -2.34
PRP42YDR235W ALG9P53868 555 aaKnown RBP0.42□□□□□ -2.34
PRP42YDR235W YNL095CP53932 642 aa0.42□□□□□ -2.34
PRP42YDR235W OSH6Q02201 448 aa0.42□□□□□ -2.34
PRP42YDR235W SNX41Q04053 625 aa0.42□□□□□ -2.34
PRP42YDR235W RDS3Q06835 107 aaPredicted RBP0.42□□□□□ -2.34
PRP42YDR235W YLR012CQ07927 99 aa0.42□□□□□ -2.34
PRP42YDR235W PML1Q07930 204 aaPredicted RBP0.42□□□□□ -2.34
PRP42YDR235W NFI1Q12216 726 aa0.42□□□□□ -2.34
PRP42YDR235W TIM22Q12328 207 aa0.42□□□□□ -2.34
PRP42YDR235W YDR262WQ12331 272 aa0.42□□□□□ -2.34
PRP42YDR235W UTP23Q12339 254 aaKnown RBP0.42□□□□□ -2.34
PRP42YDR235W PFK27Q12471 397 aaPredicted RBP0.42□□□□□ -2.34
PRP42YDR235W LAG2Q92325 660 aa0.42□□□□□ -2.34
PRP42YDR235W YCR025CP25352 136 aa0.41□□□□□ -2.34
PRP42YDR235W RRT12P25381 491 aa0.41□□□□□ -2.34
PRP42YDR235W RPL16BP26785 198 aaKnown RBP0.41□□□□□ -2.34
PRP42YDR235W VPH2P32341 215 aa0.41□□□□□ -2.34
PRP42YDR235W MRPL3P36516 390 aa0.41□□□□□ -2.34
PRP42YDR235W YBR062CP38239 180 aa0.41□□□□□ -2.34
PRP42YDR235W YHR035WP38769 630 aa0.41□□□□□ -2.34
PRP42YDR235W YFL040WP43562 540 aa0.41□□□□□ -2.34
PRP42YDR235W PIR5P46999 287 aa0.41□□□□□ -2.34
PRP42YDR235W YGR266WP53326 701 aa0.41□□□□□ -2.34
PRP42YDR235W BIO4P53630 237 aa0.41□□□□□ -2.34
PRP42YDR235W NNT1Q05874 261 aa0.41□□□□□ -2.34
PRP42YDR235W YLR446WQ06204 433 aa0.41□□□□□ -2.34
PRP42YDR235W SAM4Q08985 325 aaKnown RBP0.41□□□□□ -2.34
PRP42YDR235W PRR2Q12310 699 aa0.41□□□□□ -2.34
PRP42YDR235W DCP1Q12517 231 aaPredicted RBP0.41□□□□□ -2.34
PRP42YDR235W YAL063C-AQ3E791 96 aa0.41□□□□□ -2.34
PRP42YDR235W HIS3P06633 220 aa0.4□□□□□ -2.35
PRP42YDR235W RNR2P09938 399 aaKnown RBP0.4□□□□□ -2.35
PRP42YDR235W PHO80P20052 293 aa0.4□□□□□ -2.35
PRP42YDR235W IFM1P25038 676 aa0.4□□□□□ -2.35
PRP42YDR235W GCG1P32656 232 aaKnown RBP0.4□□□□□ -2.35
PRP42YDR235W CLB6P32943 380 aa0.4□□□□□ -2.35
PRP42YDR235W TPO5P36029 618 aa0.4□□□□□ -2.35
PRP42YDR235W MCH2P36032 473 aa0.4□□□□□ -2.35
PRP42YDR235W TRM7P38238 310 aaKnown RBP0.4□□□□□ -2.35
PRP42YDR235W YPC1P38298 316 aa0.4□□□□□ -2.35
PRP42YDR235W MBA1P38300 278 aa0.4□□□□□ -2.35
PRP42YDR235W KRE29P40026 464 aa0.4□□□□□ -2.35
PRP42YDR235W AVT6P40074 448 aa0.4□□□□□ -2.35
PRP42YDR235W UTP25P40498 721 aaKnown RBP0.4□□□□□ -2.35
PRP42YDR235W LIF1P53150 421 aa0.4□□□□□ -2.35
PRP42YDR235W SWC4P53201 476 aa0.4□□□□□ -2.35
PRP42YDR235W PDR16P53860 351 aaKnown RBP0.4□□□□□ -2.35
PRP42YDR235W MRS2Q01926 470 aa0.4□□□□□ -2.35
PRP42YDR235W SUE1Q06524 206 aa0.4□□□□□ -2.35
PRP42YDR235W PBP4Q07362 185 aaKnown RBP0.4□□□□□ -2.35
PRP42YDR235W PLB3Q08108 686 aa0.4□□□□□ -2.35
PRP42YDR235W TY3A-GQ12173 290 aa0.4□□□□□ -2.35
PRP42YDR235W RRP42Q12277 265 aaPredicted RBP0.4□□□□□ -2.35
PRP42YDR235W PSY3Q12318 242 aa0.4□□□□□ -2.35
PRP42YDR235W TY3A-IQ99219 290 aa0.4□□□□□ -2.35
PRP42YDR235W GAL3P13045 520 aa0.39□□□□□ -2.35
PRP42YDR235W SMI1P32566 505 aa0.39□□□□□ -2.35
PRP42YDR235W YEL043WP32618 956 aa0.39□□□□□ -2.35
PRP42YDR235W COY1P34237 679 aa0.39□□□□□ -2.35
PRP42YDR235W YKL162CP36052 402 aa0.39□□□□□ -2.35
PRP42YDR235W SPL2P38839 148 aa0.39□□□□□ -2.35
PRP42YDR235W LIN1P38852 340 aaPredicted RBP0.39□□□□□ -2.35
PRP42YDR235W FET3P38993 636 aa0.39□□□□□ -2.35
PRP42YDR235W VAB2P40003 282 aa0.39□□□□□ -2.35
PRP42YDR235W INA22P40576 216 aa0.39□□□□□ -2.35
PRP42YDR235W RPE1P46969 238 aa0.39□□□□□ -2.35
PRP42YDR235W YJR141WP47172 347 aaPredicted RBP0.39□□□□□ -2.35
PRP42YDR235W BAT2P47176 376 aaKnown RBP0.39□□□□□ -2.35
PRP42YDR235W UBC13P52490 153 aa0.39□□□□□ -2.35
PRP42YDR235W TPN1P53099 579 aa0.39□□□□□ -2.35
PRP42YDR235W OKP1P53298 406 aa0.39□□□□□ -2.35
PRP42YDR235W SWT21P53873 357 aaPredicted RBP0.39□□□□□ -2.35
PRP42YDR235W CGI121Q03705 181 aaKnown RBP0.39□□□□□ -2.35
PRP42YDR235W YMR166CQ03829 368 aa0.39□□□□□ -2.35
PRP42YDR235W TVP15Q03860 143 aa0.39□□□□□ -2.35
PRP42YDR235W CAB5Q03941 241 aa0.39□□□□□ -2.35
PRP42YDR235W GRH1Q04410 372 aaKnown RBP0.39□□□□□ -2.35
PRP42YDR235W YMR111CQ04461 462 aaPredicted RBP0.39□□□□□ -2.35
PRP42YDR235W YDL144CQ07589 356 aa0.39□□□□□ -2.35
PRP42YDR235W YLL007CQ07799 665 aa0.39□□□□□ -2.35
PRP42YDR235W VPS68Q12016 184 aa0.39□□□□□ -2.35
PRP42YDR235W YOR283WQ12040 230 aaKnown RBP0.39□□□□□ -2.35
PRP42YDR235W YPL150WQ12152 901 aa0.39□□□□□ -2.35
PRP42YDR235W IZH4Q99393 312 aa0.39□□□□□ -2.35
PRP42YDR235W PAN1P32521 1480 aa0.39□□□□□ -2.35
PRP42YDR235W NUP157P40064 1391 aaKnown RBP0.39□□□□□ -2.35
PRP42YDR235W RPL31AP0C2H8 113 aaKnown RBP0.38□□□□□ -2.35
PRP42YDR235W ZWF1P11412 505 aaKnown RBP0.38□□□□□ -2.35
PRP42YDR235W OSM1P21375 501 aaKnown RBP0.38□□□□□ -2.35
PRP42YDR235W VPH1P32563 840 aaKnown RBP0.38□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 100.4 ms