RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC2YDR180W AAH1P53909 347 aa0.95□□□□□ -2.26
SCC2YDR180W FDC1Q03034 503 aa0.95□□□□□ -2.26
SCC2YDR180W YMR206WQ03695 313 aa0.95□□□□□ -2.26
SCC2YDR180W YML096WQ04489 525 aa0.95□□□□□ -2.26
SCC2YDR180W NAT4Q04751 285 aa0.95□□□□□ -2.26
SCC2YDR180W YMR315WQ04869 349 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W MDM30Q05930 598 aa0.95□□□□□ -2.26
SCC2YDR180W VTA1Q06263 330 aa0.95□□□□□ -2.26
SCC2YDR180W ARR3Q06598 404 aa0.95□□□□□ -2.26
SCC2YDR180W SDO1Q07953 250 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W RRP40Q08285 240 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W RAD28Q12021 506 aa0.95□□□□□ -2.26
SCC2YDR180W POM33Q12164 279 aa0.95□□□□□ -2.26
SCC2YDR180W YDR215CQ12240 137 aa0.95□□□□□ -2.26
SCC2YDR180W YDL177CQ12257 170 aa0.95□□□□□ -2.26
SCC2YDR180W ADH2P00331 348 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W TDH2P00358 332 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W TDH3P00359 332 aaKnown RBP RIP-Chip data0.95□□□□□ -2.26not detected
SCC2YDR180W HTB1P02293 131 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W HTB2P02294 131 aa0.95□□□□□ -2.26
SCC2YDR180W REP2P03872 296 aa0.95□□□□□ -2.26
SCC2YDR180W HIS5P07172 385 aa0.95□□□□□ -2.26
SCC2YDR180W PUT4P15380 627 aa0.95□□□□□ -2.26
SCC2YDR180W MET16P18408 261 aaPredicted RBP0.95□□□□□ -2.26
SCC2YDR180W MRS4P23500 304 aa0.95□□□□□ -2.26
SCC2YDR180W YIH1P25637 258 aa0.95□□□□□ -2.26
SCC2YDR180W YCR061WP25639 631 aa0.95□□□□□ -2.26
SCC2YDR180W SNC1P31109 117 aa0.95□□□□□ -2.26
SCC2YDR180W YMC1P32331 307 aa0.95□□□□□ -2.26
SCC2YDR180W NTH1P32356 751 aa0.95□□□□□ -2.26
SCC2YDR180W SUR1P33300 382 aa0.95□□□□□ -2.26
SCC2YDR180W SKT5P34226 696 aa0.95□□□□□ -2.26
SCC2YDR180W PTC1P35182 281 aa0.95□□□□□ -2.26
SCC2YDR180W SOL2P37262 315 aa0.95□□□□□ -2.26
SCC2YDR180W YBR096WP38256 230 aa0.95□□□□□ -2.26
SCC2YDR180W MBA1P38300 278 aa0.95□□□□□ -2.26
SCC2YDR180W POP4P38336 279 aa0.95□□□□□ -2.26
SCC2YDR180W YPT31P38555 223 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W RCY1P39531 840 aa0.95□□□□□ -2.26
SCC2YDR180W GIP4P39732 760 aa0.95□□□□□ -2.26
SCC2YDR180W PTI1P39927 425 aaPredicted RBP0.95□□□□□ -2.26
SCC2YDR180W UTP25P40498 721 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W TIR3P40552 269 aa0.95□□□□□ -2.26
SCC2YDR180W UBX6P47049 396 aa0.95□□□□□ -2.26
SCC2YDR180W RPC17P47076 161 aa0.95□□□□□ -2.26
SCC2YDR180W EMC2P47133 292 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W BNS1P50084 137 aa0.95□□□□□ -2.26
SCC2YDR180W SOL1P50278 321 aa0.95□□□□□ -2.26
SCC2YDR180W PKP2P53170 491 aa0.95□□□□□ -2.26
SCC2YDR180W LSB1P53281 241 aa0.95□□□□□ -2.26
SCC2YDR180W MRPL22P53881 309 aa0.95□□□□□ -2.26
SCC2YDR180W GIM3P53900 129 aa0.95□□□□□ -2.26
SCC2YDR180W IRC15Q02733 499 aa0.95□□□□□ -2.26
SCC2YDR180W YMD8Q03697 442 aa0.95□□□□□ -2.26
SCC2YDR180W SNU56Q03782 492 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W YLR224WQ05947 369 aa0.95□□□□□ -2.26
SCC2YDR180W DIC1Q06143 298 aa0.95□□□□□ -2.26
SCC2YDR180W FRE5Q08908 694 aa0.95□□□□□ -2.26
SCC2YDR180W SLF1Q12034 447 aaKnown RBP0.95□□□□□ -2.26
SCC2YDR180W YLR122CQ12312 125 aa0.95□□□□□ -2.26
SCC2YDR180W RPN6Q12377 434 aa0.95□□□□□ -2.26
SCC2YDR180W DCN1Q12395 269 aa0.95□□□□□ -2.26
SCC2YDR180W MRPL23Q12487 163 aaPredicted RBP0.95□□□□□ -2.26
SCC2YDR180W MED11Q99278 115 aa0.95□□□□□ -2.26
SCC2YDR180W MBF1O14467 151 aaKnown RBP0.94□□□□□ -2.26
SCC2YDR180W ADE4P04046 510 aaKnown RBP0.94□□□□□ -2.26
SCC2YDR180W RPL1AP0CX43 217 aaKnown RBP0.94□□□□□ -2.26
SCC2YDR180W RPL1BP0CX44 217 aaKnown RBP0.94□□□□□ -2.26
SCC2YDR180W SNF6P18888 332 aa0.94□□□□□ -2.26
SCC2YDR180W EPT1P22140 391 aa0.94□□□□□ -2.26
SCC2YDR180W SLY1P22213 666 aa0.94□□□□□ -2.26
SCC2YDR180W CPR2P23285 205 aa0.94□□□□□ -2.26
SCC2YDR180W YIM1P28625 365 aa0.94□□□□□ -2.26
SCC2YDR180W SRB5P32585 307 aa0.94□□□□□ -2.26
SCC2YDR180W SPR1P32603 445 aa0.94□□□□□ -2.26
SCC2YDR180W AGP2P38090 596 aa0.94□□□□□ -2.26
SCC2YDR180W ANS1P38832 159 aa0.94□□□□□ -2.26
SCC2YDR180W SKN7P38889 622 aa0.94□□□□□ -2.26
SCC2YDR180W GIM4P40005 111 aaKnown RBP0.94□□□□□ -2.26
SCC2YDR180W SCC4P40090 624 aa0.94□□□□□ -2.26
SCC2YDR180W PEP8P40335 379 aa0.94□□□□□ -2.26
SCC2YDR180W VMA13P41807 478 aaKnown RBP0.94□□□□□ -2.26
SCC2YDR180W STE24P47154 453 aa0.94□□□□□ -2.26
SCC2YDR180W FHN1P53279 174 aa0.94□□□□□ -2.26
SCC2YDR180W YNL033WP53964 284 aa0.94□□□□□ -2.26
SCC2YDR180W YNL019CP53975 284 aa0.94□□□□□ -2.26
SCC2YDR180W ACT1P60010 375 aaKnown RBP0.94□□□□□ -2.26
SCC2YDR180W MRPL1Q04599 285 aa0.94□□□□□ -2.26
SCC2YDR180W SPC2Q04969 178 aa0.94□□□□□ -2.26
SCC2YDR180W THI7Q05998 598 aa0.94□□□□□ -2.26
SCC2YDR180W YOL131WQ08270 108 aa0.94□□□□□ -2.26
SCC2YDR180W MED7Q08278 222 aa0.94□□□□□ -2.26
SCC2YDR180W YPL216WQ08964 1102 aa0.94□□□□□ -2.26
SCC2YDR180W ATG41Q12048 136 aa0.94□□□□□ -2.26
SCC2YDR180W YOR114WQ12219 294 aa0.94□□□□□ -2.26
SCC2YDR180W YOP1Q12402 180 aa0.94□□□□□ -2.26
SCC2YDR180W YIL002W-AQ3E7Z5 69 aa0.94□□□□□ -2.26
SCC2YDR180W RHO2P06781 192 aa0.94□□□□□ -2.26
SCC2YDR180W RPL31AP0C2H8 113 aaKnown RBP0.94□□□□□ -2.26
SCC2YDR180W RPL31BP0C2H9 113 aaKnown RBP0.94□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 76.3 ms