RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C VPS45P38932 577 aa1.28□□□□□ -2.2
SWI5YDR146C ASP1P38986 381 aaPredicted RBP1.28□□□□□ -2.2
SWI5YDR146C END3P39013 349 aa1.28□□□□□ -2.2
SWI5YDR146C YIR035CP40579 254 aa1.28□□□□□ -2.2
SWI5YDR146C HIT1P46973 164 aa1.28□□□□□ -2.2
SWI5YDR146C ECM18Q04623 453 aa1.28□□□□□ -2.2
SWI5YDR146C ATP6P00854 259 aa1.28□□□□□ -2.2
SWI5YDR146C RPS23AP0CX29 145 aaKnown RBP1.28□□□□□ -2.2
SWI5YDR146C RPS23BP0CX30 145 aa1.28□□□□□ -2.2
SWI5YDR146C DBP3P20447 523 aaKnown RBP1.28□□□□□ -2.2
SWI5YDR146C DAL81P21657 970 aa1.28□□□□□ -2.2
SWI5YDR146C YCR025CP25352 136 aa1.28□□□□□ -2.2
SWI5YDR146C ARO4P32449 370 aaKnown RBP1.28□□□□□ -2.2
SWI5YDR146C ZRT1P32804 376 aa1.28□□□□□ -2.2
SWI5YDR146C IMP3P32899 183 aaPredicted RBP1.28□□□□□ -2.2
SWI5YDR146C YHL044WP38727 235 aa1.28□□□□□ -2.2
SWI5YDR146C VAB2P40003 282 aa1.28□□□□□ -2.2
SWI5YDR146C YIL054WP40524 105 aa1.28□□□□□ -2.2
SWI5YDR146C GCD14P46959 383 aaPredicted RBP1.28□□□□□ -2.2
SWI5YDR146C YGL118CP53132 145 aa1.28□□□□□ -2.2
SWI5YDR146C UTP23Q12339 254 aaKnown RBP1.28□□□□□ -2.2
SWI5YDR146C YPR1Q12458 312 aa1.28□□□□□ -2.2
SWI5YDR146C LAG2Q92325 660 aa1.28□□□□□ -2.2
SWI5YDR146C ERD1P16151 362 aa1.27□□□□□ -2.21
SWI5YDR146C MBA1P38300 278 aa1.27□□□□□ -2.21
SWI5YDR146C YIL059CP40520 121 aa1.27□□□□□ -2.21
SWI5YDR146C YFR045WP43617 309 aa1.27□□□□□ -2.21
SWI5YDR146C COX16P47081 118 aa1.27□□□□□ -2.21
SWI5YDR146C LIF1P53150 421 aa1.27□□□□□ -2.21
SWI5YDR146C IGO1P53897 168 aa1.27□□□□□ -2.21
SWI5YDR146C VIK1Q12045 647 aa1.27□□□□□ -2.21
SWI5YDR146C MDY2Q12285 212 aa1.27□□□□□ -2.21
SWI5YDR146C PRE7P23724 241 aaKnown RBP1.27□□□□□ -2.21
SWI5YDR146C IFM1P25038 676 aa1.27□□□□□ -2.21
SWI5YDR146C RPL16BP26785 198 aaKnown RBP1.27□□□□□ -2.21
SWI5YDR146C TPO5P36029 618 aa1.27□□□□□ -2.21
SWI5YDR146C AIM29P36154 155 aa1.27□□□□□ -2.21
SWI5YDR146C MED8P38304 223 aa1.27□□□□□ -2.21
SWI5YDR146C RRF1P38771 230 aa1.27□□□□□ -2.21
SWI5YDR146C SMC2P38989 1170 aaKnown RBP1.27□□□□□ -2.21
SWI5YDR146C CAX4P53223 239 aa1.27□□□□□ -2.21
SWI5YDR146C VOA1P53262 265 aa1.27□□□□□ -2.21
SWI5YDR146C YGR266WP53326 701 aa1.27□□□□□ -2.21
SWI5YDR146C YNL040WP53960 456 aaPredicted RBP1.27□□□□□ -2.21
SWI5YDR146C SPO19Q03029 223 aa1.27□□□□□ -2.21
SWI5YDR146C PBP4Q07362 185 aaKnown RBP1.27□□□□□ -2.21
SWI5YDR146C SAM4Q08985 325 aaKnown RBP1.27□□□□□ -2.21
SWI5YDR146C SIA1Q12212 622 aa1.27□□□□□ -2.21
SWI5YDR146C TDH2P00358 332 aaKnown RBP1.26□□□□□ -2.21
SWI5YDR146C DAL5P15365 543 aa1.26□□□□□ -2.21
SWI5YDR146C SAR1P20606 190 aaKnown RBP1.26□□□□□ -2.21
SWI5YDR146C GCG1P32656 232 aaKnown RBP1.26□□□□□ -2.21
SWI5YDR146C RPC37P36121 282 aa1.26□□□□□ -2.21
SWI5YDR146C SDH4P37298 181 aa1.26□□□□□ -2.21
SWI5YDR146C ECM14P38836 430 aa1.26□□□□□ -2.21
SWI5YDR146C EDC2P40023 145 aaPredicted RBP1.26□□□□□ -2.21
SWI5YDR146C YPT32P51996 222 aaKnown RBP1.26□□□□□ -2.21
SWI5YDR146C SWC4P53201 476 aa1.26□□□□□ -2.21
SWI5YDR146C TAZ1Q06510 381 aa1.26□□□□□ -2.21
SWI5YDR146C STF1P01098 86 aa1.25□□□□□ -2.21
SWI5YDR146C GPI12P23797 304 aa1.25□□□□□ -2.21
SWI5YDR146C AEP1P32493 518 aa1.25□□□□□ -2.21
SWI5YDR146C CSE1P33307 960 aa1.25□□□□□ -2.21
SWI5YDR146C RPC25P35718 212 aa1.25□□□□□ -2.21
SWI5YDR146C SHQ1P40486 507 aaPredicted RBP1.25□□□□□ -2.21
SWI5YDR146C YFL064CP43540 174 aa1.25□□□□□ -2.21
SWI5YDR146C YJL144WP47009 104 aa1.25□□□□□ -2.21
SWI5YDR146C GTO1P48239 356 aa1.25□□□□□ -2.21
SWI5YDR146C HSH155P49955 971 aaKnown RBP1.25□□□□□ -2.21
SWI5YDR146C OSH6Q02201 448 aa1.25□□□□□ -2.21
SWI5YDR146C CSI1Q04368 295 aa1.25□□□□□ -2.21
SWI5YDR146C ERV41Q04651 352 aa1.25□□□□□ -2.21
SWI5YDR146C PEX30Q06169 523 aa1.25□□□□□ -2.21
SWI5YDR146C DXO1Q06349 442 aa1.25□□□□□ -2.21
SWI5YDR146C LOA1Q06508 300 aa1.25□□□□□ -2.21
SWI5YDR146C HRT1Q08273 121 aa1.25□□□□□ -2.21
SWI5YDR146C YOR114WQ12219 294 aa1.25□□□□□ -2.21
SWI5YDR146C IZH4Q99393 312 aa1.25□□□□□ -2.21
SWI5YDR146C RAD7P06779 565 aa1.25□□□□□ -2.21
SWI5YDR146C FRS2P15625 503 aaKnown RBP1.25□□□□□ -2.21
SWI5YDR146C MRPL3P36516 390 aa1.25□□□□□ -2.21
SWI5YDR146C MRPL40P36534 297 aa1.25□□□□□ -2.21
SWI5YDR146C ASG7P46993 209 aa1.25□□□□□ -2.21
SWI5YDR146C TPN1P53099 579 aa1.25□□□□□ -2.21
SWI5YDR146C ERV25P54837 211 aaKnown RBP1.25□□□□□ -2.21
SWI5YDR146C YPL077CQ02831 240 aa1.25□□□□□ -2.21
SWI5YDR146C YDL144CQ07589 356 aa1.25□□□□□ -2.21
SWI5YDR146C YPR063CQ12160 140 aa1.25□□□□□ -2.21
SWI5YDR146C UGA1P17649 471 aa1.24□□□□□ -2.21
SWI5YDR146C ATG15P25641 520 aa1.24□□□□□ -2.21
SWI5YDR146C CDC13P32797 924 aaKnown RBP1.24□□□□□ -2.21
SWI5YDR146C SWD2P36104 329 aaPredicted RBP1.24□□□□□ -2.21
SWI5YDR146C SYS1P41544 203 aa1.24□□□□□ -2.21
SWI5YDR146C AGP3P43548 558 aa1.24□□□□□ -2.21
SWI5YDR146C YGL185CP53100 379 aa1.24□□□□□ -2.21
SWI5YDR146C PNC1P53184 216 aaKnown RBP1.24□□□□□ -2.21
SWI5YDR146C YPL113CQ02961 396 aa1.24□□□□□ -2.21
SWI5YDR146C YPR064WQ12492 139 aa1.24□□□□□ -2.21
SWI5YDR146C GAL7P08431 366 aa1.24□□□□□ -2.21
SWI5YDR146C YOL163WP0CF20 169 aa1.24□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms