RNA–Protein interactions for RNA: YDL196W

YDL196W, Transcript of Dubious open reading frame, yeast

Gene YDL196W, Length 330 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL196W	YDL196W	TAE1	P38340	232 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	CHL4	P38907	458 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	SOP4	P39543	234 aa	Predicted RBP	0.8	□□□□□ -2.28
YDL196W	YDL196W	HEM14	P40012	539 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	DSE1	P40077	573 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	SLM1	P40485	686 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	AGP3	P43548	558 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	TAD2	P47058	250 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	MPP10	P47083	593 aa	Known RBP	0.8	□□□□□ -2.28
YDL196W	YDL196W	COQ5	P49017	307 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	MND1	P53102	219 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	SDS23	P53172	527 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	RPN14	P53196	417 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	RSM27	P53305	110 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	MPP6	P53725	186 aa	Predicted RBP	0.8	□□□□□ -2.28
YDL196W	YDL196W	YNL050C	P53952	270 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	ATC1	Q04005	294 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	VTI1	Q04338	217 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	GMC1	Q04399	608 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	API2	Q04413	109 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	GMC2	Q06201	188 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	YLR446W	Q06204	433 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	ASR1	Q06834	288 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	SLM3	Q12093	417 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	APC9	Q12107	265 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	PER33	Q12144	273 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	MRP1	P10662	321 aa	Known RBP	0.79	□□□□□ -2.28
YDL196W	YDL196W	TFS1	P14306	219 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	IMP1	P28627	190 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	SUA5	P32579	426 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	IMP3	P32899	183 aa	Predicted RBP	0.79	□□□□□ -2.28
YDL196W	YDL196W	YKL162C	P36052	402 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	RPC37	P36121	282 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	AIM29	P36154	155 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	RCK1	P38622	512 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	YHI9	P38765	294 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	SPT8	P38915	602 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	SMC2	P38989	1170 aa	Known RBP	0.79	□□□□□ -2.28
YDL196W	YDL196W	SHC1	P39000	512 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	FRT2	P39734	528 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	EDC2	P40023	145 aa	Predicted RBP	0.79	□□□□□ -2.28
YDL196W	YDL196W	KRE29	P40026	464 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	RRT13	P40042	185 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	MEP1	P40260	492 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	UFE1	P41834	346 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	YFL064C	P43540	174 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	CPR7	P47103	393 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	PRP24	P49960	444 aa	Known RBP	0.79	□□□□□ -2.28
YDL196W	YDL196W	YPT32	P51996	222 aa	Known RBP	0.79	□□□□□ -2.28
YDL196W	YDL196W	UBC13	P52490	153 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	KAP114	P53067	1004 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	YGL118C	P53132	145 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	LIF1	P53150	421 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	TIM21	P53220	239 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	FMP48	P53233	369 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	YGR067C	P53243	804 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	CPD1	P53314	239 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	BIO4	P53630	237 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	YNR066C	P53752	436 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.79	□□□□□ -2.28	not detected
YDL196W	YDL196W	YMR209C	Q03648	457 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	INP1	Q03694	420 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	INP2	Q03824	705 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	ECM18	Q04623	453 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	YOL029C	Q08187	201 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	POM33	Q12164	279 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	MED4	Q12343	284 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	TRM10	Q12400	293 aa		0.79	□□□□□ -2.28
YDL196W	YDL196W	SSK22	P25390	1331 aa	Predicted RBP	0.79	□□□□□ -2.28
YDL196W	YDL196W	HIS1	P00498	297 aa	Known RBP	0.78	□□□□□ -2.28
YDL196W	YDL196W	RPS14A	P06367	137 aa	Known RBP	0.78	□□□□□ -2.28
YDL196W	YDL196W	SPS100	P13130	326 aa		0.78	□□□□□ -2.28
YDL196W	YDL196W	CUP2	P15315	225 aa		0.78	□□□□□ -2.28
YDL196W	YDL196W	FRS2	P15625	503 aa	Known RBP	0.78	□□□□□ -2.28
YDL196W	YDL196W	FUS3	P16892	353 aa	Known RBP	0.78	□□□□□ -2.28
YDL196W	YDL196W	MET16	P18408	261 aa	Predicted RBP	0.78	□□□□□ -2.28
YDL196W	YDL196W	OSM1	P21375	501 aa	Known RBP	0.78	□□□□□ -2.28
YDL196W	YDL196W	DAL81	P21657	970 aa		0.78	□□□□□ -2.28
YDL196W	YDL196W	DAL82	P21705	255 aa		0.78	□□□□□ -2.28
YDL196W	YDL196W	PEX3	P28795	441 aa		0.78	□□□□□ -2.28
YDL196W	YDL196W	CAM1	P29547	415 aa	Known RBP	0.78	□□□□□ -2.28
YDL196W	YDL196W	AEP1	P32493	518 aa		0.78	□□□□□ -2.28
YDL196W	YDL196W	CDC13	P32797	924 aa	Known RBP	0.78	□□□□□ -2.28
YDL196W	YDL196W	SPT4	P32914	102 aa	Predicted RBP	0.78	□□□□□ -2.28
YDL196W	YDL196W	PPQ1	P32945	549 aa		0.78	□□□□□ -2.28
YDL196W	YDL196W	RIB7	P33312	244 aa		0.78	□□□□□ -2.28
YDL196W	YDL196W	ZRT3	P34240	503 aa		0.78	□□□□□ -2.28
YDL196W	YDL196W	YUH1	P35127	236 aa		0.78	□□□□□ -2.28
YDL196W	YDL196W	TPO5	P36029	618 aa		0.78	□□□□□ -2.28
YDL196W	YDL196W	MRPL3	P36516	390 aa		0.78	□□□□□ -2.28
YDL196W	YDL196W	SMP1	P38128	452 aa		0.78	□□□□□ -2.28
YDL196W	YDL196W	TRR2	P38816	342 aa		0.78	□□□□□ -2.28
YDL196W	YDL196W	ASP1	P38986	381 aa	Predicted RBP	0.78	□□□□□ -2.28
YDL196W	YDL196W	RPS14B	P39516	138 aa	Known RBP	0.78	□□□□□ -2.28
YDL196W	YDL196W	RCY1	P39531	840 aa		0.78	□□□□□ -2.28
YDL196W	YDL196W	VAB2	P40003	282 aa		0.78	□□□□□ -2.28
YDL196W	YDL196W	SHQ1	P40486	507 aa	Predicted RBP	0.78	□□□□□ -2.28
YDL196W	YDL196W	GCD14	P46959	383 aa	Predicted RBP	0.78	□□□□□ -2.28
YDL196W	YDL196W	ASG7	P46993	209 aa		0.78	□□□□□ -2.28
YDL196W	YDL196W	YGL185C	P53100	379 aa		0.78	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms