RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C HEM4P06174 275 aa2.04□□□□□ -2.08
PRP6YBR055C CHA1P25379 360 aaKnown RBP2.04□□□□□ -2.08
PRP6YBR055C LDB7P38210 180 aa2.04□□□□□ -2.08
PRP6YBR055C SWC4P53201 476 aa2.04□□□□□ -2.08
PRP6YBR055C MTM1P53320 366 aa2.04□□□□□ -2.08
PRP6YBR055C MSO1P53604 210 aaKnown RBP2.04□□□□□ -2.08
PRP6YBR055C ALG11P53954 548 aaKnown RBP2.04□□□□□ -2.08
PRP6YBR055C YMR027WQ04371 470 aa2.04□□□□□ -2.08
PRP6YBR055C SDO1Q07953 250 aaKnown RBP2.04□□□□□ -2.08
PRP6YBR055C ESA1Q08649 445 aa2.04□□□□□ -2.08
PRP6YBR055C RDL2Q08742 149 aaKnown RBP2.04□□□□□ -2.08
PRP6YBR055C YDL199CQ12407 687 aa2.04□□□□□ -2.08
PRP6YBR055C NUP188P52593 1655 aaKnown RBP2.04□□□□□ -2.08
PRP6YBR055C HIS1P00498 297 aaKnown RBP2.04□□□□□ -2.08
PRP6YBR055C RPS18AP0CX55 146 aaKnown RBP2.04□□□□□ -2.08
PRP6YBR055C RPS18BP0CX56 146 aaPredicted RBP2.04□□□□□ -2.08
PRP6YBR055C CTA1P15202 515 aa2.04□□□□□ -2.08
PRP6YBR055C FUN26P31381 517 aa2.04□□□□□ -2.08
PRP6YBR055C PRS4P38063 326 aaPredicted RBP2.04□□□□□ -2.08
PRP6YBR055C YPC1P38298 316 aa2.04□□□□□ -2.08
PRP6YBR055C SIP3P38717 1229 aa2.04□□□□□ -2.08
PRP6YBR055C HIT1P46973 164 aa2.04□□□□□ -2.08
PRP6YBR055C YJR085CP47131 105 aaKnown RBP2.04□□□□□ -2.08
PRP6YBR055C MST27P53176 234 aa2.04□□□□□ -2.08
PRP6YBR055C SHY1P53266 389 aa2.04□□□□□ -2.08
PRP6YBR055C GIM3P53900 129 aa2.04□□□□□ -2.08
PRP6YBR055C YLR012CQ07927 99 aa2.04□□□□□ -2.08
PRP6YBR055C SRL1Q08673 210 aa2.04□□□□□ -2.08
PRP6YBR055C RRP42Q12277 265 aaPredicted RBP2.04□□□□□ -2.08
PRP6YBR055C NUP2P32499 720 aa2.03□□□□□ -2.08
PRP6YBR055C IES6P32617 166 aa2.03□□□□□ -2.08
PRP6YBR055C RCK2P38623 610 aa2.03□□□□□ -2.08
PRP6YBR055C GDS1P41913 522 aa2.03□□□□□ -2.08
PRP6YBR055C CWC25P53854 179 aaKnown RBP2.03□□□□□ -2.08
PRP6YBR055C TSR1Q07381 788 aaKnown RBP2.03□□□□□ -2.08
PRP6YBR055C YDL114WQ07530 308 aa2.03□□□□□ -2.08
PRP6YBR055C HNT3Q08702 217 aa2.03□□□□□ -2.08
PRP6YBR055C MSH5Q12175 901 aa2.03□□□□□ -2.08
PRP6YBR055C TIP41Q12199 356 aa2.03□□□□□ -2.08
PRP6YBR055C HMS1Q12398 434 aa2.03□□□□□ -2.08
PRP6YBR055C YBL111CQ3E7Y5 667 aa2.03□□□□□ -2.08
PRP6YBR055C YRF1-2P40105 1681 aa2.03□□□□□ -2.09
PRP6YBR055C MSI1P13712 422 aa2.03□□□□□ -2.09
PRP6YBR055C MRPL25P23369 157 aa2.03□□□□□ -2.09
PRP6YBR055C INO2P26798 304 aa2.03□□□□□ -2.09
PRP6YBR055C PEX22P39718 180 aa2.03□□□□□ -2.09
PRP6YBR055C HEM14P40012 539 aa2.03□□□□□ -2.09
PRP6YBR055C TIS11P47977 285 aa2.03□□□□□ -2.09
PRP6YBR055C NBP1P52919 319 aaPredicted RBP2.03□□□□□ -2.09
PRP6YBR055C NOP13P53883 403 aaKnown RBP RIP-Chip data2.03□□□□□ -2.09not detected
PRP6YBR055C VBA1Q04301 562 aa2.03□□□□□ -2.09
PRP6YBR055C SSQ1Q05931 657 aaPredicted RBP2.03□□□□□ -2.09
PRP6YBR055C GAS2Q06135 555 aa2.03□□□□□ -2.09
PRP6YBR055C RIF2Q06208 395 aa2.03□□□□□ -2.09
PRP6YBR055C TFC7Q12415 435 aa2.03□□□□□ -2.09
PRP6YBR055C YCL021W-AQ96VH3 125 aa2.03□□□□□ -2.09
PRP6YBR055C PMT2P31382 759 aa2.02□□□□□ -2.09
PRP6YBR055C MRPL6P32904 214 aa2.02□□□□□ -2.09
PRP6YBR055C KTI12P34253 313 aaKnown RBP2.02□□□□□ -2.09
PRP6YBR055C EGT2P42835 1041 aa2.02□□□□□ -2.09
PRP6YBR055C MOB2P43563 287 aa2.02□□□□□ -2.09
PRP6YBR055C TAD2P47058 250 aa2.02□□□□□ -2.09
PRP6YBR055C CDH1P53197 566 aa2.02□□□□□ -2.09
PRP6YBR055C YDR209CQ03480 137 aa2.02□□□□□ -2.09
PRP6YBR055C ENT5Q03769 411 aaKnown RBP2.02□□□□□ -2.09
PRP6YBR055C FSH2Q05015 223 aa2.02□□□□□ -2.09
PRP6YBR055C YHC1Q05900 231 aaKnown RBP2.02□□□□□ -2.09
PRP6YBR055C YPR064WQ12492 139 aa2.02□□□□□ -2.09
PRP6YBR055C VMR1P38735 1592 aa2.02□□□□□ -2.09
PRP6YBR055C RHO1P06780 209 aaKnown RBP2.02□□□□□ -2.09
PRP6YBR055C NHP6BP11633 99 aaKnown RBP2.02□□□□□ -2.09
PRP6YBR055C MIR1P23641 311 aaKnown RBP2.02□□□□□ -2.09
PRP6YBR055C POF1P25576 258 aa2.02□□□□□ -2.09
PRP6YBR055C PPA2P28239 310 aa2.02□□□□□ -2.09
PRP6YBR055C PDC2P32896 925 aa2.02□□□□□ -2.09
PRP6YBR055C SPT4P32914 102 aaPredicted RBP2.02□□□□□ -2.09
PRP6YBR055C MCH2P36032 473 aa2.02□□□□□ -2.09
PRP6YBR055C MAL32P38158 584 aa2.02□□□□□ -2.09
PRP6YBR055C SOP4P39543 234 aaPredicted RBP2.02□□□□□ -2.09
PRP6YBR055C DDI1P40087 428 aa2.02□□□□□ -2.09
PRP6YBR055C YNL208WP40159 199 aaKnown RBP2.02□□□□□ -2.09
PRP6YBR055C IDP2P41939 412 aa2.02□□□□□ -2.09
PRP6YBR055C UBC13P52490 153 aa2.02□□□□□ -2.09
PRP6YBR055C VHT1P53241 593 aa2.02□□□□□ -2.09
PRP6YBR055C MAL12P53341 584 aa2.02□□□□□ -2.09
PRP6YBR055C CRZ1P53968 678 aa2.02□□□□□ -2.09
PRP6YBR055C SUR7P54003 302 aa2.02□□□□□ -2.09
PRP6YBR055C BNA7Q04066 261 aa2.02□□□□□ -2.09
PRP6YBR055C YLR283WQ05867 314 aa2.02□□□□□ -2.09
PRP6YBR055C TAZ1Q06510 381 aa2.02□□□□□ -2.09
PRP6YBR055C CTR3Q06686 241 aa2.02□□□□□ -2.09
PRP6YBR055C MFG1Q07684 458 aa2.02□□□□□ -2.09
PRP6YBR055C TAF10Q12030 206 aa2.02□□□□□ -2.09
PRP6YBR055C YBT1P32386 1661 aa2.02□□□□□ -2.09
PRP6YBR055C RPS8AP0CX39 200 aaKnown RBP2.01□□□□□ -2.09
PRP6YBR055C RPS8BP0CX40 200 aaKnown RBP2.01□□□□□ -2.09
PRP6YBR055C REV1P12689 985 aa2.01□□□□□ -2.09
PRP6YBR055C TFS1P14306 219 aa2.01□□□□□ -2.09
PRP6YBR055C DEP1P31385 405 aa2.01□□□□□ -2.09
PRP6YBR055C CSE1P33307 960 aa2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms