RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C ASC1P38011 319 aaKnown RBP2.11□□□□□ -2.07
CLN3YAL040C RIB1P38066 345 aa2.11□□□□□ -2.07
CLN3YAL040C YBR139WP38109 508 aa2.11□□□□□ -2.07
CLN3YAL040C ECM8P38246 354 aa2.11□□□□□ -2.07
CLN3YAL040C BAT1P38891 393 aaKnown RBP2.11□□□□□ -2.07
CLN3YAL040C LYS1P38998 373 aaRIP-Chip data2.11□□□□□ -2.07 RIP-Chip
CLN3YAL040C ELO1P39540 310 aa2.11□□□□□ -2.07
CLN3YAL040C RBG1P39729 369 aa2.11□□□□□ -2.07
CLN3YAL040C AIM10P39965 576 aaKnown RBP2.11□□□□□ -2.07
CLN3YAL040C BUR6P40096 142 aa2.11□□□□□ -2.07
CLN3YAL040C FAU1P40099 211 aa2.11□□□□□ -2.07
CLN3YAL040C PAC11P40960 533 aa2.11□□□□□ -2.07
CLN3YAL040C ROG1P53118 685 aa2.11□□□□□ -2.07
CLN3YAL040C PRM8P53174 237 aa2.11□□□□□ -2.07
CLN3YAL040C MNT4P53745 580 aa2.11□□□□□ -2.07
CLN3YAL040C DSL1P53847 754 aa2.11□□□□□ -2.07
CLN3YAL040C RSN1Q03516 953 aa2.11□□□□□ -2.07
CLN3YAL040C ATC1Q04005 294 aa2.11□□□□□ -2.07
CLN3YAL040C YMR226CQ05016 267 aaKnown RBP2.11□□□□□ -2.07
CLN3YAL040C RGC1Q06108 1083 aaKnown RBP2.11□□□□□ -2.07
CLN3YAL040C TEN1Q07921 160 aa2.11□□□□□ -2.07
CLN3YAL040C RKM1Q08961 583 aaPredicted RBP2.11□□□□□ -2.07
CLN3YAL040C SRO7Q12038 1033 aa2.11□□□□□ -2.07
CLN3YAL040C VAM3Q12241 283 aa2.11□□□□□ -2.07
CLN3YAL040C BRR2P32639 2163 aaKnown RBP2.1□□□□□ -2.07
CLN3YAL040C ACC1Q00955 2233 aaKnown RBP2.1□□□□□ -2.07
CLN3YAL040C ADE5,7P07244 802 aaKnown RBP2.1□□□□□ -2.07
CLN3YAL040C SSA3P09435 649 aaKnown RBP2.1□□□□□ -2.07
CLN3YAL040C MRPS28P21771 286 aa2.1□□□□□ -2.07
CLN3YAL040C CNA1P23287 553 aa2.1□□□□□ -2.07
CLN3YAL040C ELO2P25358 347 aa2.1□□□□□ -2.07
CLN3YAL040C BOS1P25385 244 aa2.1□□□□□ -2.07
CLN3YAL040C MXR2P25566 168 aa2.1□□□□□ -2.07
CLN3YAL040C ERG1P32476 496 aaKnown RBP2.1□□□□□ -2.07
CLN3YAL040C HIR2P32480 875 aa2.1□□□□□ -2.07
CLN3YAL040C DOA4P32571 926 aa2.1□□□□□ -2.07
CLN3YAL040C SIP1P32578 815 aa2.1□□□□□ -2.07
CLN3YAL040C PTR2P32901 601 aa2.1□□□□□ -2.07
CLN3YAL040C SUI1P32911 108 aaKnown RBP2.1□□□□□ -2.07
CLN3YAL040C SOF1P33750 489 aaKnown RBP2.1□□□□□ -2.07
CLN3YAL040C YKL070WP36087 169 aa2.1□□□□□ -2.07
CLN3YAL040C MRPL37P36532 105 aa2.1□□□□□ -2.07
CLN3YAL040C IMD2P38697 523 aaKnown RBP2.1□□□□□ -2.07
CLN3YAL040C YHR177WP38867 453 aa2.1□□□□□ -2.07
CLN3YAL040C EGD2P38879 174 aaKnown RBP2.1□□□□□ -2.07
CLN3YAL040C AVT6P40074 448 aa2.1□□□□□ -2.07
CLN3YAL040C XBP1P40489 647 aa2.1□□□□□ -2.07
CLN3YAL040C RPL10P41805 221 aaKnown RBP2.1□□□□□ -2.07
CLN3YAL040C EMC2P47133 292 aaKnown RBP2.1□□□□□ -2.07
CLN3YAL040C STE24P47154 453 aa2.1□□□□□ -2.07
CLN3YAL040C HMS2P47175 358 aa2.1□□□□□ -2.07
CLN3YAL040C VMA10P48836 114 aaKnown RBP2.1□□□□□ -2.07
CLN3YAL040C SDT1P53078 280 aa2.1□□□□□ -2.07
CLN3YAL040C PNC1P53184 216 aaKnown RBP2.1□□□□□ -2.07
CLN3YAL040C CGR1P53188 120 aa2.1□□□□□ -2.07
CLN3YAL040C GIM3P53900 129 aa2.1□□□□□ -2.07
CLN3YAL040C SWS2P53937 143 aa2.1□□□□□ -2.07
CLN3YAL040C IRC15Q02733 499 aa2.1□□□□□ -2.07
CLN3YAL040C SRL4Q03085 281 aa2.1□□□□□ -2.07
CLN3YAL040C TRM82Q03774 444 aa2.1□□□□□ -2.07
CLN3YAL040C APC4Q04601 652 aa2.1□□□□□ -2.07
CLN3YAL040C SMA2Q04658 369 aa2.1□□□□□ -2.07
CLN3YAL040C RRG8Q06109 277 aa2.1□□□□□ -2.07
CLN3YAL040C YLR173WQ06247 608 aa2.1□□□□□ -2.07
CLN3YAL040C YDL086WQ07505 273 aa2.1□□□□□ -2.07
CLN3YAL040C CYK3Q07533 885 aa2.1□□□□□ -2.07
CLN3YAL040C YDL242WQ07746 117 aa2.1□□□□□ -2.07
CLN3YAL040C CRT10Q08226 957 aa2.1□□□□□ -2.07
CLN3YAL040C BSC1Q12140 328 aa2.1□□□□□ -2.07
CLN3YAL040C MED4Q12343 284 aa2.1□□□□□ -2.07
CLN3YAL040C IES3Q12345 250 aa2.1□□□□□ -2.07
CLN3YAL040C RKM5Q12367 367 aa2.1□□□□□ -2.07
CLN3YAL040C HFA1P32874 2273 aa2.1□□□□□ -2.07
CLN3YAL040C COX1P00401 534 aa2.09□□□□□ -2.07
CLN3YAL040C AAC1P04710 309 aa2.09□□□□□ -2.07
CLN3YAL040C PDE2P06776 526 aa2.09□□□□□ -2.07
CLN3YAL040C PUT2P07275 575 aa2.09□□□□□ -2.07
CLN3YAL040C RIP1P08067 215 aa2.09□□□□□ -2.07
CLN3YAL040C ZWF1P11412 505 aaKnown RBP2.09□□□□□ -2.07
CLN3YAL040C PRP2P20095 876 aaPredicted RBP2.09□□□□□ -2.07
CLN3YAL040C SAG1P20840 650 aa2.09□□□□□ -2.07
CLN3YAL040C RPS1BP23248 255 aaKnown RBP2.09□□□□□ -2.07
CLN3YAL040C CHA1P25379 360 aaKnown RBP2.09□□□□□ -2.07
CLN3YAL040C BUB3P26449 341 aa2.09□□□□□ -2.07
CLN3YAL040C LAC1P28496 418 aa2.09□□□□□ -2.07
CLN3YAL040C ASF2P32448 525 aaPredicted RBP2.09□□□□□ -2.07
CLN3YAL040C APE2P32454 952 aaKnown RBP2.09□□□□□ -2.07
CLN3YAL040C SFC1P33303 322 aa2.09□□□□□ -2.07
CLN3YAL040C MSN4P33749 630 aa2.09□□□□□ -2.07
CLN3YAL040C LHS1P36016 881 aa2.09□□□□□ -2.07
CLN3YAL040C YKR015CP36111 568 aa2.09□□□□□ -2.07
CLN3YAL040C THO1P40040 218 aaKnown RBP2.09□□□□□ -2.07
CLN3YAL040C PRE6P40303 254 aaKnown RBP2.09□□□□□ -2.07
CLN3YAL040C AIM20P40451 204 aa2.09□□□□□ -2.07
CLN3YAL040C LYS12P40495 371 aaKnown RBP2.09□□□□□ -2.07
CLN3YAL040C CDC40P40968 455 aaPredicted RBP2.09□□□□□ -2.07
CLN3YAL040C FAR7P43592 221 aa2.09□□□□□ -2.07
CLN3YAL040C ATG27P46989 271 aa2.09□□□□□ -2.07
CLN3YAL040C UBX6P47049 396 aa2.09□□□□□ -2.07
CLN3YAL040C TOS2P50078 622 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 74.8 ms