RNA–Protein interactions for RNA: YAL018C

LDS1, Transcript of Protein Involved in spore wall assembly, yeastyeast

Gene LDS1, Length 978 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDS1YAL018C EFM3P47163 339 aa5.47□□□□□ -1.53
LDS1YAL018C PGU1P47180 361 aa5.47□□□□□ -1.53
LDS1YAL018C PGA1P53896 198 aa5.47□□□□□ -1.53
LDS1YAL018C PRP3Q03338 469 aaPredicted RBP5.47□□□□□ -1.53
LDS1YAL018C SNX41Q04053 625 aa5.47□□□□□ -1.53
LDS1YAL018C COX20Q04935 205 aa5.47□□□□□ -1.53
LDS1YAL018C FMP42Q04991 504 aa5.47□□□□□ -1.53
LDS1YAL018C FMP45Q07651 309 aa5.47□□□□□ -1.53
LDS1YAL018C GRE1Q08969 168 aa5.47□□□□□ -1.53
LDS1YAL018C YRA1Q12159 226 aaKnown RBP5.47□□□□□ -1.53
LDS1YAL018C MDM32Q12171 622 aa5.47□□□□□ -1.53
LDS1YAL018C RBD2Q12270 262 aa5.47□□□□□ -1.53
LDS1YAL018C SFG1Q12507 346 aa5.47□□□□□ -1.53
LDS1YAL018C YGR161W-CQ3E744 92 aa5.47□□□□□ -1.53
LDS1YAL018C CYC7P00045 113 aa5.46□□□□□ -1.54
LDS1YAL018C YFR010W-AP0C5N0 62 aa5.46□□□□□ -1.54
LDS1YAL018C DPB2P24482 689 aaPredicted RBP5.46□□□□□ -1.54
LDS1YAL018C MTC2P34246 357 aa5.46□□□□□ -1.54
LDS1YAL018C UTP11P34247 250 aaPredicted RBP5.46□□□□□ -1.54
LDS1YAL018C MOH1P38191 138 aa5.46□□□□□ -1.54
LDS1YAL018C NVJ1P38881 321 aa5.46□□□□□ -1.54
LDS1YAL018C PHO90P39535 881 aa5.46□□□□□ -1.54
LDS1YAL018C AIM10P39965 576 aaKnown RBP5.46□□□□□ -1.54
LDS1YAL018C SHO1P40073 367 aa5.46□□□□□ -1.54
LDS1YAL018C QDR1P40475 563 aa5.46□□□□□ -1.54
LDS1YAL018C REE1P40893 198 aa5.46□□□□□ -1.54
LDS1YAL018C QRI7P43122 407 aa5.46□□□□□ -1.54
LDS1YAL018C BPL1P48445 690 aaPredicted RBP5.46□□□□□ -1.54
LDS1YAL018C RRN9P53437 365 aa5.46□□□□□ -1.54
LDS1YAL018C APM1Q00776 475 aaPredicted RBP5.46□□□□□ -1.54
LDS1YAL018C NUP116Q02630 1113 aa5.46□□□□□ -1.54
LDS1YAL018C SCS7Q03529 384 aa5.46□□□□□ -1.54
LDS1YAL018C RCF1Q03713 159 aa5.46□□□□□ -1.54
LDS1YAL018C MRPL51Q06090 140 aaPredicted RBP5.46□□□□□ -1.54
LDS1YAL018C RDL2Q08742 149 aaKnown RBP5.46□□□□□ -1.54
LDS1YAL018C BTS1Q12051 335 aa5.46□□□□□ -1.54
LDS1YAL018C SWM1Q12379 170 aa5.46□□□□□ -1.54
LDS1YAL018C YOR343CQ12484 108 aa5.46□□□□□ -1.54
LDS1YAL018C RPL7AP05737 244 aaKnown RBP5.45□□□□□ -1.54
LDS1YAL018C MET2P08465 486 aa5.45□□□□□ -1.54
LDS1YAL018C UTR1P21373 530 aa5.45□□□□□ -1.54
LDS1YAL018C SCO1P23833 295 aa5.45□□□□□ -1.54
LDS1YAL018C CLB2P24869 491 aa5.45□□□□□ -1.54
LDS1YAL018C AHC2P25649 128 aa5.45□□□□□ -1.54
LDS1YAL018C FUN19P28003 413 aaPredicted RBP5.45□□□□□ -1.54
LDS1YAL018C MDH3P32419 343 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
LDS1YAL018C PAD1P33751 242 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
LDS1YAL018C MAL32P38158 584 aa5.45□□□□□ -1.54
LDS1YAL018C SHE1P38200 338 aa5.45□□□□□ -1.54
LDS1YAL018C APD1P38281 316 aa5.45□□□□□ -1.54
LDS1YAL018C RTT105P40063 208 aa5.45□□□□□ -1.54
LDS1YAL018C MNN5P46982 586 aa5.45□□□□□ -1.54
LDS1YAL018C MAL12P53341 584 aa5.45□□□□□ -1.54
LDS1YAL018C SDC1Q03323 175 aa5.45□□□□□ -1.54
LDS1YAL018C MIX14Q04341 121 aa5.45□□□□□ -1.54
LDS1YAL018C YDR514CQ04408 483 aa5.45□□□□□ -1.54
LDS1YAL018C YLR173WQ06247 608 aa5.45□□□□□ -1.54
LDS1YAL018C YPR147CQ06522 304 aaKnown RBP5.45□□□□□ -1.54
LDS1YAL018C IPK1Q06667 281 aa5.45□□□□□ -1.54
LDS1YAL018C CDA2Q06703 312 aa5.45□□□□□ -1.54
LDS1YAL018C MDM36Q06820 579 aa5.45□□□□□ -1.54
LDS1YAL018C NIP7Q08962 181 aaKnown RBP5.45□□□□□ -1.54
LDS1YAL018C THP3Q12049 470 aaKnown RBP5.45□□□□□ -1.54
LDS1YAL018C MSL5Q12186 476 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
LDS1YAL018C RPL7BQ12213 244 aaKnown RBP5.45□□□□□ -1.54
LDS1YAL018C ACC1Q00955 2233 aaKnown RBP5.45□□□□□ -1.54
LDS1YAL018C YAL064W-BO13512 126 aa5.44□□□□□ -1.54
LDS1YAL018C SPO7P18410 259 aa5.44□□□□□ -1.54
LDS1YAL018C RPB8P20436 146 aa5.44□□□□□ -1.54
LDS1YAL018C SDS22P36047 338 aa5.44□□□□□ -1.54
LDS1YAL018C YPK3P38070 525 aa5.44□□□□□ -1.54
LDS1YAL018C YBR063CP38083 404 aa5.44□□□□□ -1.54
LDS1YAL018C YNL208WP40159 199 aaKnown RBP5.44□□□□□ -1.54
LDS1YAL018C JLP2P40206 208 aa5.44□□□□□ -1.54
LDS1YAL018C SDP1P40479 209 aa5.44□□□□□ -1.54
LDS1YAL018C PFS2P42841 465 aaKnown RBP5.44□□□□□ -1.54
LDS1YAL018C PBP1P53297 722 aaKnown RBP5.44□□□□□ -1.54
LDS1YAL018C GIS1Q03833 894 aa5.44□□□□□ -1.54
LDS1YAL018C RVB1Q03940 463 aaKnown RBP5.44□□□□□ -1.54
LDS1YAL018C VBA4Q04602 768 aaKnown RBP5.44□□□□□ -1.54
LDS1YAL018C YDL114WQ07530 308 aa5.44□□□□□ -1.54
LDS1YAL018C AIM6Q07716 390 aa5.44□□□□□ -1.54
LDS1YAL018C YOL114CQ12322 202 aa5.44□□□□□ -1.54
LDS1YAL018C MSW1P04803 379 aa5.43□□□□□ -1.54
LDS1YAL018C CDC31P06704 161 aaKnown RBP5.43□□□□□ -1.54
LDS1YAL018C HMG1P12683 1054 aa5.43□□□□□ -1.54
LDS1YAL018C GAS1P22146 559 aaKnown RBP5.43□□□□□ -1.54
LDS1YAL018C STE50P25344 346 aa5.43□□□□□ -1.54
LDS1YAL018C NFS1P25374 497 aa5.43□□□□□ -1.54
LDS1YAL018C CAM1P29547 415 aaKnown RBP5.43□□□□□ -1.54
LDS1YAL018C ATS1P31386 333 aa5.43□□□□□ -1.54
LDS1YAL018C THI4P32318 326 aa5.43□□□□□ -1.54
LDS1YAL018C SRP102P36057 244 aaPredicted RBP5.43□□□□□ -1.54
LDS1YAL018C DTR1P38125 572 aa5.43□□□□□ -1.54
LDS1YAL018C PCL6P40038 420 aa5.43□□□□□ -1.54
LDS1YAL018C FMC1P40491 155 aa5.43□□□□□ -1.54
LDS1YAL018C NIT2P47016 307 aa5.43□□□□□ -1.54
LDS1YAL018C YAE1P47118 141 aaPredicted RBP5.43□□□□□ -1.54
LDS1YAL018C YGR066CP53242 292 aa5.43□□□□□ -1.54
LDS1YAL018C YGR126WP53274 230 aa5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms