RNA–Protein interactions for RNA: ENST00000587697.1

TNFRSF11A-203, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 3

Gene TNFRSF11A, Length 528 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-203ENST00000587697 PPP2R3AQ06190 1150 aa13.05□□□□□ -0.32
TNFRSF11A-203ENST00000587697 STRN3Q13033 797 aa13.05□□□□□ -0.32
TNFRSF11A-203ENST00000587697 PTPN21Q16825 1174 aa13.05□□□□□ -0.32
TNFRSF11A-203ENST00000587697 SPECC1LQ69YQ0 1117 aa13.05□□□□□ -0.32
TNFRSF11A-203ENST00000587697 ARMCX5Q6P1M9 558 aa13.05□□□□□ -0.32
TNFRSF11A-203ENST00000587697 NFRKBQ6P4R8 1299 aa13.05□□□□□ -0.32
TNFRSF11A-203ENST00000587697 ZPBP2Q6X784 338 aa13.05□□□□□ -0.32
TNFRSF11A-203ENST00000587697 CREBRFQ8IUR6 639 aa13.05□□□□□ -0.32
TNFRSF11A-203ENST00000587697 FAM186BQ8IYM0 893 aa13.05□□□□□ -0.32
TNFRSF11A-203ENST00000587697 KIAA0319LQ8IZA0 1049 aa13.05□□□□□ -0.32
TNFRSF11A-203ENST00000587697 DNAJC5GQ8N7S2 189 aa13.05□□□□□ -0.32
TNFRSF11A-203ENST00000587697 XXYLT1Q8NBI6 393 aa13.05□□□□□ -0.32
TNFRSF11A-203ENST00000587697 FBXL18Q96ME1 805 aa13.05□□□□□ -0.32
TNFRSF11A-203ENST00000587697 ERGIC2Q96RQ1 377 aa13.05□□□□□ -0.32
TNFRSF11A-203ENST00000587697 MAP7D2Q96T17 732 aa13.05□□□□□ -0.32
TNFRSF11A-203ENST00000587697 NDST4Q9H3R1 872 aa13.05□□□□□ -0.32
TNFRSF11A-203ENST00000587697 EXOC3O60645 756 aa13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 PRKCBP05771 671 aa13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 PTMAP06454 111 aaKnown RBP13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 PHKA2P46019 1235 aa13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 LIG4P49917 911 aa13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 GPC3P51654 580 aa13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 UBXN1Q04323 297 aa13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 FAM187BQ17R55 369 aa13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 CEP135Q66GS9 1140 aa13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 LHX8Q68G74 356 aa13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 CXCL17Q6UXB2 119 aa13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 CCDC186Q7Z3E2 898 aa13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 ZNF410Q86VK4 478 aa13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 SESTD1Q86VW0 696 aa13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 PCSK9Q8NBP7 692 aaKnown RBP13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 PPP1R13LQ8WUF5 828 aa13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 SLC35C1Q96A29 364 aa13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 BICD1Q96G01 975 aa13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 NLRP4Q96MN2 994 aa13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 FZD8Q9H461 694 aa13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 IFT122Q9HBG6 1241 aa13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 HMX1Q9NP08 348 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 HDAC6Q9UBN7 1215 aa13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 AKT3Q9Y243 479 aa13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 PTPN22Q9Y2R2 807 aa13.04□□□□□ -0.32
TNFRSF11A-203ENST00000587697 C17orf102A2RUQ5 167 aa13.03□□□□□ -0.32
TNFRSF11A-203ENST00000587697 KIAA0391O15091 583 aaKnown RBP13.03□□□□□ -0.32
TNFRSF11A-203ENST00000587697 VTNP04004 478 aa13.03□□□□□ -0.32
TNFRSF11A-203ENST00000587697 ASGR1P07306 291 aa13.03□□□□□ -0.32
TNFRSF11A-203ENST00000587697 ADRB2P07550 413 aa13.03□□□□□ -0.32
TNFRSF11A-203ENST00000587697 CYP2C9P11712 490 aa13.03□□□□□ -0.32
TNFRSF11A-203ENST00000587697 GSDMDP57764 484 aa13.03□□□□□ -0.32
TNFRSF11A-203ENST00000587697 KCNA10Q16322 511 aa13.03□□□□□ -0.32
TNFRSF11A-203ENST00000587697 FKBP15Q5T1M5 1219 aa13.03□□□□□ -0.32
TNFRSF11A-203ENST00000587697 RUFY4Q6ZNE9 571 aa13.03□□□□□ -0.32
TNFRSF11A-203ENST00000587697 C7orf31Q8N865 590 aa13.03□□□□□ -0.32
TNFRSF11A-203ENST00000587697 ZSWIM2Q8NEG5 633 aa13.03□□□□□ -0.32
TNFRSF11A-203ENST00000587697 TARS2Q9BW92 718 aaKnown RBP13.03□□□□□ -0.32
TNFRSF11A-203ENST00000587697 MRPL4Q9BYD3 311 aaKnown RBP13.03□□□□□ -0.32
TNFRSF11A-203ENST00000587697 HAPLN2Q9GZV7 340 aa13.03□□□□□ -0.32
TNFRSF11A-203ENST00000587697 PCIF1Q9H4Z3 704 aa13.03□□□□□ -0.32
TNFRSF11A-203ENST00000587697 MINDY3Q9H8M7 445 aa13.03□□□□□ -0.32
TNFRSF11A-203ENST00000587697 GTF2IRD1Q9UHL9 959 aa13.03□□□□□ -0.32
TNFRSF11A-203ENST00000587697 FRMD4BQ9Y2L6 1034 aa13.03□□□□□ -0.32
TNFRSF11A-203ENST00000587697 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.03□□□□□ -0.32
TNFRSF11A-203ENST00000587697 TANC1Q9C0D5 1861 aa13.02□□□□□ -0.32
TNFRSF11A-203ENST00000587697 A0A087WZ62 844 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 A0A0B4J269 797 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 TTLL13PA6NNM8 815 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 ACKR2O00590 384 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 ABLIM1O14639 778 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 TREHO43280 583 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 GNAT1P11488 350 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 PROZP22891 400 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 CHMP4BP1P59074 171 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 CDC42EP1Q00587 391 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 ENPEPQ07075 957 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 BFSP1Q12934 665 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 SYCP1Q15431 976 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 MAPK6Q16659 721 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 AMHR2Q16671 573 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 NBPF20Q3BBV1 942 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 SLFN12LQ6IEE8 588 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 INTS8Q75QN2 995 aaKnown RBP13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 RNF180Q86T96 592 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 GPD1LQ8N335 351 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 CCDC150Q8NCX0 1101 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 POMGNT1Q8WZA1 660 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 ACO2Q99798 780 aaKnown RBP13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 FDXACB1Q9BRP7 624 aaPredicted RBP13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 TSEN34Q9BSV6 310 aaKnown RBP13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 ADAMTS10Q9H324 1103 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 KCNF1Q9H3M0 494 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 PRMT7Q9NVM4 692 aaPredicted RBP13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 SIK3Q9Y2K2 1263 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 USP20Q9Y2K6 914 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 GRIN2DO15399 1336 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 CNTNAP2Q9UHC6 1331 aa13.02□□□□□ -0.33
TNFRSF11A-203ENST00000587697 PES1O00541 588 aaKnown RBP13.01□□□□□ -0.33
TNFRSF11A-203ENST00000587697 EXTL3O43909 919 aa13.01□□□□□ -0.33
TNFRSF11A-203ENST00000587697 GPR32O75388 356 aa13.01□□□□□ -0.33
TNFRSF11A-203ENST00000587697 TOM1L1O75674 476 aa13.01□□□□□ -0.33
TNFRSF11A-203ENST00000587697 CABYRO75952 493 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms