RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 DIS3Q9Y2L1 958 aaKnown RBP4.41□□□□□ -1.7
HMGN1P11-201ENST00000508668 CAPN6Q9Y6Q1 641 aa4.41□□□□□ -1.7
HMGN1P11-201ENST00000508668 ATAD5Q96QE3 1844 aa4.41□□□□□ -1.7
HMGN1P11-201ENST00000508668 VWA5AO00534 786 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 PRKAB2O43741 272 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 PEX10O60683 326 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 LRRN2O75325 713 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 CABYRO75952 493 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 PGK1P00558 417 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 PGK2P07205 417 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 ZNF865P0CJ78 1059 aaPredicted RBP4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 CYP2D6P10635 497 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 ACTN1P12814 892 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 ALAS1P13196 640 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 CYBAP13498 195 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 ETFBP38117 255 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 CCNFP41002 786 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 KIR3DL1P43629 444 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 CD97P48960 835 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 OAZ1P54368 228 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 RNF4P78317 190 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 TFAP4Q01664 338 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 TNK2Q07912 1038 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 NKPD1Q17RQ9 610 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 MSMPQ1L6U9 139 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 TKFCQ3LXA3 575 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 TRIM60Q495X7 471 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 RRP12Q5JTH9 1297 aaKnown RBP4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 PRAMEF19Q5SWL8 479 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 SLFN13Q68D06 897 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 CTR9Q6PD62 1173 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 PSRC1Q6PGN9 363 aaPredicted RBP4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 UNC5AQ6ZN44 842 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 RIOX2Q8IUF8 465 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 SPACA3Q8IXA5 215 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 RPUSD2Q8IZ73 545 aaKnown RBP4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 TAB3Q8N5C8 712 aaPredicted RBP4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 KBTBD3Q8NAB2 608 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 SLC44A5Q8NCS7 719 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 NPLOC4Q8TAT6 608 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 BADQ92934 168 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 Q96M66 194 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 ASPNQ9BXN1 380 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 SEZ6LQ9BYH1 1024 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 MKRN2Q9H000 416 aaKnown RBP4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 ABHD16BQ9H3Z7 469 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 RNF41Q9H4P4 317 aaPredicted RBP4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 DNAJC18Q9H819 358 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 GOLGA2P5Q9HBQ8 144 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 NYAP2Q9P242 653 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 SYNPO2Q9UMS6 1093 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 PLAGL2Q9UPG8 496 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 MYH1P12882 1939 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 PFASO15067 1338 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 TTC41PQ6P2S7 1318 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 TRIOBPQ9H2D6 2365 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 LOC285556D6RIA3 1793 aa4.4□□□□□ -1.71
HMGN1P11-201ENST00000508668 ZSWIM8A7E2V4 1837 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 TMEM265A0A087WTH1 108 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 CYP2D7A0A087X1C5 515 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 A0A0U1RQG5 324 aaPredicted RBP4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 A0A1W2PQ45 241 aaPredicted RBP4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 A0A1W2PQH9 124 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 A0A1W2PQY0 241 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 A0A1W2PRG0 241 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 PTPDC1A2A3K4 754 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 KIF28PB7ZC32 967 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 TMEM232C9JQI7 657 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 H3BS24 57 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 GPAA1O43292 621 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 SMARCA5O60264 1052 aaPredicted RBP4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 DUSP11O75319 330 aaKnown RBP4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 PRDM1O75626 825 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 TP53P04637 393 aaPredicted RBP4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 SUPT20HL2P0C7V6 817 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 COL6A1P12109 1028 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 ATP2B1P20020 1258 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 MX1P20591 662 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 CPT1AP50416 773 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 ACLYP53396 1101 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 JAG1P78504 1218 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 SMAD3P84022 425 aaKnown RBP4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 TNFAIP2Q03169 654 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 TLE2Q04725 743 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 TRDNQ13061 729 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 TRAF1Q13077 416 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 ACVR2BQ13705 512 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 TMEM132BQ14DG7 1078 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 LRRC41Q15345 812 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 RAB30Q15771 203 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 KCNA10Q16322 511 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 AAK1Q2M2I8 961 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 SHROOM1Q2M3G4 852 aaPredicted RBP4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 SBK1Q52WX2 424 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 CCDC178Q5BJE1 867 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 FAM47CQ5HY64 1035 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 FAM47AQ5JRC9 791 aa4.39□□□□□ -1.71
HMGN1P11-201ENST00000508668 ANKRD45Q5TZF3 282 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms