RNA–Protein interactions for RNA: YOR378W

AMF1, Transcript of Putative paralog of ATR1, yeastyeast

Gene AMF1, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMF1YOR378W MLH1P38920 769 aa7.68□□□□□ -1.18
AMF1YOR378W HIS6P40545 261 aa7.68□□□□□ -1.18
AMF1YOR378W PDR16P53860 351 aaKnown RBP7.68□□□□□ -1.18
AMF1YOR378W GIS1Q03833 894 aa7.68□□□□□ -1.18
AMF1YOR378W GRX3Q03835 250 aa7.68□□□□□ -1.18
AMF1YOR378W YLR173WQ06247 608 aa7.68□□□□□ -1.18
AMF1YOR378W MDM36Q06820 579 aa7.68□□□□□ -1.18
AMF1YOR378W YOR238WQ08634 303 aa7.68□□□□□ -1.18
AMF1YOR378W YOR343CQ12484 108 aa7.68□□□□□ -1.18
AMF1YOR378W REP1P03871 373 aa7.67□□□□□ -1.18
AMF1YOR378W CYT1P07143 309 aa7.67□□□□□ -1.18
AMF1YOR378W RPB8P20436 146 aa7.67□□□□□ -1.18
AMF1YOR378W FPS1P23900 669 aa7.67□□□□□ -1.18
AMF1YOR378W YCL002CP25565 263 aa7.67□□□□□ -1.18
AMF1YOR378W MRPL16P38064 232 aa7.67□□□□□ -1.18
AMF1YOR378W CHK1P38147 527 aa7.67□□□□□ -1.18
AMF1YOR378W NVJ1P38881 321 aa7.67□□□□□ -1.18
AMF1YOR378W SEC24P40482 926 aaKnown RBP7.67□□□□□ -1.18
AMF1YOR378W ECO1P43605 281 aa7.67□□□□□ -1.18
AMF1YOR378W SFH5P47008 294 aa7.67□□□□□ -1.18
AMF1YOR378W NOG1Q02892 647 aaKnown RBP7.67□□□□□ -1.18
AMF1YOR378W TAZ1Q06510 381 aa7.67□□□□□ -1.18
AMF1YOR378W HRT1Q08273 121 aa7.67□□□□□ -1.18
AMF1YOR378W RKM1Q08961 583 aaPredicted RBP7.67□□□□□ -1.18
AMF1YOR378W THP3Q12049 470 aaKnown RBP7.67□□□□□ -1.18
AMF1YOR378W SWM1Q12379 170 aa7.67□□□□□ -1.18
AMF1YOR378W MTR10Q99189 972 aa7.67□□□□□ -1.18
AMF1YOR378W TEL1P38110 2787 aa7.66□□□□□ -1.18
AMF1YOR378W SCO1P23833 295 aa7.66□□□□□ -1.18
AMF1YOR378W PDR3P33200 976 aa7.66□□□□□ -1.18
AMF1YOR378W ECT1P33412 323 aa7.66□□□□□ -1.18
AMF1YOR378W PAD1P33751 242 aaKnown RBP RIP-Chip data7.66□□□□□ -1.18not detected
AMF1YOR378W MAL32P38158 584 aa7.66□□□□□ -1.18
AMF1YOR378W VBA2P38358 474 aaKnown RBP7.66□□□□□ -1.18
AMF1YOR378W PHO90P39535 881 aa7.66□□□□□ -1.18
AMF1YOR378W YER184CP39961 794 aa7.66□□□□□ -1.18
AMF1YOR378W REE1P40893 198 aa7.66□□□□□ -1.18
AMF1YOR378W MAL12P53341 584 aa7.66□□□□□ -1.18
AMF1YOR378W YPL039WQ03080 316 aa7.66□□□□□ -1.18
AMF1YOR378W SCS7Q03529 384 aa7.66□□□□□ -1.18
AMF1YOR378W MIX14Q04341 121 aa7.66□□□□□ -1.18
AMF1YOR378W RDL2Q08742 149 aaKnown RBP7.66□□□□□ -1.18
AMF1YOR378W YFR010W-AP0C5N0 62 aa7.65□□□□□ -1.18
AMF1YOR378W GAS1P22146 559 aaKnown RBP7.65□□□□□ -1.18
AMF1YOR378W MTC2P34246 357 aa7.65□□□□□ -1.18
AMF1YOR378W KAE1P36132 386 aa7.65□□□□□ -1.18
AMF1YOR378W PCL6P40038 420 aa7.65□□□□□ -1.18
AMF1YOR378W JLP2P40206 208 aa7.65□□□□□ -1.18
AMF1YOR378W YIL165CP40446 119 aa7.65□□□□□ -1.18
AMF1YOR378W FMC1P40491 155 aa7.65□□□□□ -1.18
AMF1YOR378W PFS2P42841 465 aaKnown RBP7.65□□□□□ -1.18
AMF1YOR378W RPS0BP46654 252 aaKnown RBP7.65□□□□□ -1.18
AMF1YOR378W NUP116Q02630 1113 aa7.65□□□□□ -1.18
AMF1YOR378W MGR3Q04472 501 aa7.65□□□□□ -1.18
AMF1YOR378W IPK1Q06667 281 aa7.65□□□□□ -1.18
AMF1YOR378W IRA1P18963 3092 aa7.64□□□□□ -1.19
AMF1YOR378W RPL24BP24000 155 aaKnown RBP7.64□□□□□ -1.19
AMF1YOR378W CLB2P24869 491 aa7.64□□□□□ -1.19
AMF1YOR378W FUN19P28003 413 aaPredicted RBP7.64□□□□□ -1.19
AMF1YOR378W ARO7P32178 256 aa7.64□□□□□ -1.19
AMF1YOR378W DTR1P38125 572 aa7.64□□□□□ -1.19
AMF1YOR378W APD1P38281 316 aa7.64□□□□□ -1.19
AMF1YOR378W SHO1P40073 367 aa7.64□□□□□ -1.19
AMF1YOR378W SDP1P40479 209 aa7.64□□□□□ -1.19
AMF1YOR378W NAS2P40555 220 aa7.64□□□□□ -1.19
AMF1YOR378W BRR6P53062 197 aa7.64□□□□□ -1.19
AMF1YOR378W YGR054WP53235 642 aaKnown RBP7.64□□□□□ -1.19
AMF1YOR378W YGR126WP53274 230 aa7.64□□□□□ -1.19
AMF1YOR378W PBP1P53297 722 aaKnown RBP7.64□□□□□ -1.19
AMF1YOR378W FDC1Q03034 503 aa7.64□□□□□ -1.19
AMF1YOR378W SDC1Q03323 175 aa7.64□□□□□ -1.19
AMF1YOR378W MRPL51Q06090 140 aaPredicted RBP7.64□□□□□ -1.19
AMF1YOR378W YPR109WQ06104 294 aa7.64□□□□□ -1.19
AMF1YOR378W YPR147CQ06522 304 aaKnown RBP7.64□□□□□ -1.19
AMF1YOR378W FRE5Q08908 694 aa7.64□□□□□ -1.19
AMF1YOR378W YOL114CQ12322 202 aa7.64□□□□□ -1.19
AMF1YOR378W YAL064W-BO13512 126 aa7.63□□□□□ -1.19
AMF1YOR378W KIN28P06242 306 aa7.63□□□□□ -1.19
AMF1YOR378W PDX1P16451 410 aa7.63□□□□□ -1.19
AMF1YOR378W PUB1P32588 453 aaKnown RBP RIP-Chip data7.63□□□□□ -1.19not detected
AMF1YOR378W POP1P41812 875 aa7.63□□□□□ -1.19
AMF1YOR378W NIT2P47016 307 aa7.63□□□□□ -1.19
AMF1YOR378W YAE1P47118 141 aaPredicted RBP7.63□□□□□ -1.19
AMF1YOR378W VOA1P53262 265 aa7.63□□□□□ -1.19
AMF1YOR378W ATG4P53867 494 aa7.63□□□□□ -1.19
AMF1YOR378W RCF1Q03713 159 aa7.63□□□□□ -1.19
AMF1YOR378W YDL114WQ07530 308 aa7.63□□□□□ -1.19
AMF1YOR378W YDL176WQ12027 708 aa7.63□□□□□ -1.19
AMF1YOR378W MSL5Q12186 476 aaKnown RBP RIP-Chip data7.63□□□□□ -1.19not detected
AMF1YOR378W GIT1P25346 518 aa7.62□□□□□ -1.19
AMF1YOR378W SDS22P36047 338 aa7.62□□□□□ -1.19
AMF1YOR378W YBR063CP38083 404 aa7.62□□□□□ -1.19
AMF1YOR378W AMN1P38285 549 aaPredicted RBP7.62□□□□□ -1.19
AMF1YOR378W SCW11P53189 542 aa7.62□□□□□ -1.19
AMF1YOR378W APM1Q00776 475 aaPredicted RBP7.62□□□□□ -1.19
AMF1YOR378W RRP9Q06506 573 aaKnown RBP7.62□□□□□ -1.19
AMF1YOR378W AIM6Q07716 390 aa7.62□□□□□ -1.19
AMF1YOR378W GRE1Q08969 168 aa7.62□□□□□ -1.19
AMF1YOR378W YRM1Q12340 786 aa7.62□□□□□ -1.19
AMF1YOR378W IES3Q12345 250 aa7.62□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms