RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W FET3P38993 636 aa9.29□□□□□ -0.92
PRE6YOL038W GDI1P39958 451 aaKnown RBP9.29□□□□□ -0.92
PRE6YOL038W YIL012WP40551 113 aa9.29□□□□□ -0.92
PRE6YOL038W RCE1Q03530 315 aa9.29□□□□□ -0.92
PRE6YOL038W SSY1Q03770 852 aa9.29□□□□□ -0.92
PRE6YOL038W SNO4Q04902 237 aa9.29□□□□□ -0.92
PRE6YOL038W SNT309Q06091 175 aaPredicted RBP9.29□□□□□ -0.92
PRE6YOL038W RSC58Q07979 502 aa9.29□□□□□ -0.92
PRE6YOL038W HSP33Q08914 237 aaKnown RBP9.29□□□□□ -0.92
PRE6YOL038W HSP32Q08992 237 aa9.29□□□□□ -0.92
PRE6YOL038W MHF1Q3E835 90 aa9.29□□□□□ -0.92
PRE6YOL038W CDC4P07834 779 aa9.28□□□□□ -0.92
PRE6YOL038W EXG1P23776 448 aaKnown RBP9.28□□□□□ -0.92
PRE6YOL038W YBR063CP38083 404 aa9.28□□□□□ -0.92
PRE6YOL038W NAB3P38996 802 aaKnown RBP RIP-Chip data9.28□□□□□ -0.92not detected
PRE6YOL038W PRE6P40303 254 aaKnown RBP9.28□□□□□ -0.92
PRE6YOL038W RMR1P53060 241 aa9.28□□□□□ -0.92
PRE6YOL038W TEX1P53851 422 aaKnown RBP9.28□□□□□ -0.92
PRE6YOL038W ASI1P54074 624 aa9.28□□□□□ -0.92
PRE6YOL038W ACS1Q01574 713 aa9.28□□□□□ -0.92
PRE6YOL038W NDL1Q06568 189 aa9.28□□□□□ -0.92
PRE6YOL038W PRB1P09232 635 aa9.27□□□□□ -0.93
PRE6YOL038W PTP2P29461 750 aa9.27□□□□□ -0.93
PRE6YOL038W MDH3P32419 343 aaKnown RBP RIP-Chip data9.27□□□□□ -0.93not detected
PRE6YOL038W FMP33P46998 180 aa9.27□□□□□ -0.93
PRE6YOL038W CTS2Q06350 511 aa9.27□□□□□ -0.93
PRE6YOL038W RPS16AP0CX51 143 aaKnown RBP9.26□□□□□ -0.93
PRE6YOL038W RPS16BP0CX52 143 aaKnown RBP9.26□□□□□ -0.93
PRE6YOL038W HAP4P14064 554 aa9.26□□□□□ -0.93
PRE6YOL038W CAM1P29547 415 aaKnown RBP9.26□□□□□ -0.93
PRE6YOL038W DBF20P32328 564 aa9.26□□□□□ -0.93
PRE6YOL038W NIC96P34077 839 aa9.26□□□□□ -0.93
PRE6YOL038W CTF8P38877 133 aa9.26□□□□□ -0.93
PRE6YOL038W MDJ2P42834 146 aa9.26□□□□□ -0.93
PRE6YOL038W GPI8P49018 411 aa9.26□□□□□ -0.93
PRE6YOL038W NIT3P49954 291 aa9.26□□□□□ -0.93
PRE6YOL038W RPL6AQ02326 176 aaKnown RBP9.26□□□□□ -0.93
PRE6YOL038W RTC5Q12108 567 aaKnown RBP9.26□□□□□ -0.93
PRE6YOL038W RNH203Q12338 110 aa9.26□□□□□ -0.93
PRE6YOL038W APC2Q12440 853 aa9.26□□□□□ -0.93
PRE6YOL038W YOL159C-AQ3E769 90 aa9.26□□□□□ -0.93
PRE6YOL038W PRP28P23394 588 aa9.25□□□□□ -0.93
PRE6YOL038W CLB4P24871 460 aa9.25□□□□□ -0.93
PRE6YOL038W SED4P25365 1065 aa9.25□□□□□ -0.93
PRE6YOL038W SPC34P36131 295 aa9.25□□□□□ -0.93
PRE6YOL038W AHP1P38013 176 aaKnown RBP9.25□□□□□ -0.93
PRE6YOL038W SIP18P50263 79 aa9.25□□□□□ -0.93
PRE6YOL038W SKO1Q02100 647 aa9.25□□□□□ -0.93
PRE6YOL038W YTH1Q06102 208 aaPredicted RBP9.25□□□□□ -0.93
PRE6YOL038W RTN2Q12443 393 aa9.25□□□□□ -0.93
PRE6YOL038W YAK1P14680 807 aa9.24□□□□□ -0.93
PRE6YOL038W PCL1P24867 279 aa9.24□□□□□ -0.93
PRE6YOL038W VPH2P32341 215 aa9.24□□□□□ -0.93
PRE6YOL038W STB1P42845 420 aa9.24□□□□□ -0.93
PRE6YOL038W MRK1P50873 501 aa9.24□□□□□ -0.93
PRE6YOL038W PRM8P53174 237 aa9.24□□□□□ -0.93
PRE6YOL038W YGR168CP53293 376 aa9.24□□□□□ -0.93
PRE6YOL038W MNT4P53745 580 aa9.24□□□□□ -0.93
PRE6YOL038W RSM28Q03430 361 aa9.24□□□□□ -0.93
PRE6YOL038W PML1Q07930 204 aaPredicted RBP9.24□□□□□ -0.93
PRE6YOL038W DAL80P26343 269 aa9.23□□□□□ -0.93
PRE6YOL038W SPC29P33419 253 aa9.23□□□□□ -0.93
PRE6YOL038W MAL12P53341 584 aa9.23□□□□□ -0.93
PRE6YOL038W COS1P53822 381 aa9.23□□□□□ -0.93
PRE6YOL038W SED1Q01589 338 aa9.23□□□□□ -0.93
PRE6YOL038W GAT3Q07928 141 aa9.23□□□□□ -0.93
PRE6YOL038W MIM1Q08176 113 aa9.23□□□□□ -0.93
PRE6YOL038W VIK1Q12045 647 aa9.23□□□□□ -0.93
PRE6YOL038W SIA1Q12212 622 aa9.23□□□□□ -0.93
PRE6YOL038W DPM1P14020 267 aaKnown RBP9.22□□□□□ -0.93
PRE6YOL038W SPO73P40031 143 aa9.22□□□□□ -0.93
PRE6YOL038W YIL029CP40538 142 aa9.22□□□□□ -0.93
PRE6YOL038W MPH1P40562 993 aa9.22□□□□□ -0.93
PRE6YOL038W DPB11P47027 764 aaPredicted RBP9.22□□□□□ -0.93
PRE6YOL038W YJR098CP47139 656 aa9.22□□□□□ -0.93
PRE6YOL038W VMA10P48836 114 aaKnown RBP9.22□□□□□ -0.93
PRE6YOL038W MTM1P53320 366 aa9.22□□□□□ -0.93
PRE6YOL038W YNL165WP53891 406 aa9.22□□□□□ -0.93
PRE6YOL038W FIT3Q08907 204 aa9.22□□□□□ -0.93
PRE6YOL038W CPR2P23285 205 aa9.21□□□□□ -0.94
PRE6YOL038W RRP7P25368 297 aaPredicted RBP9.21□□□□□ -0.94
PRE6YOL038W ASF2P32448 525 aaPredicted RBP9.21□□□□□ -0.94
PRE6YOL038W PRP19P32523 503 aaKnown RBP9.21□□□□□ -0.94
PRE6YOL038W AST1P35183 429 aa9.21□□□□□ -0.94
PRE6YOL038W ECM14P38836 430 aa9.21□□□□□ -0.94
PRE6YOL038W THO1P40040 218 aaKnown RBP9.21□□□□□ -0.94
PRE6YOL038W POP1P41812 875 aa9.21□□□□□ -0.94
PRE6YOL038W RRN9P53437 365 aa9.21□□□□□ -0.94
PRE6YOL038W CRZ1P53968 678 aa9.21□□□□□ -0.94
PRE6YOL038W DTD1Q07648 150 aaKnown RBP9.21□□□□□ -0.94
PRE6YOL038W YDL007C-AQ2V2Q0 85 aa9.21□□□□□ -0.94
PRE6YOL038W OPI3P05375 206 aa9.2□□□□□ -0.94
PRE6YOL038W SNF4P12904 322 aa9.2□□□□□ -0.94
PRE6YOL038W FBA1P14540 359 aaKnown RBP9.2□□□□□ -0.94
PRE6YOL038W SNF6P18888 332 aa9.2□□□□□ -0.94
PRE6YOL038W URE2P23202 354 aaKnown RBP9.2□□□□□ -0.94
PRE6YOL038W UBC8P28263 218 aa9.2□□□□□ -0.94
PRE6YOL038W SCY1P53009 804 aa9.2□□□□□ -0.94
PRE6YOL038W TNA1P53322 534 aa9.2□□□□□ -0.94
PRE6YOL038W ASI2P53895 289 aa9.2□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms